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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1317752..1321753- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009751-T1 ID=KJC3_009751-T1|Name=KJC3_009751-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4002bp|location=Sequence derived from alignment at ch7:1317752..1321753- (Aspergillus niger KJC3)
AACTTATTTATATTTCTCTCTAGGGATTGGCTCAACCCATTGTCTGGATG
CCGGACTTGAACATGTGCCTTCCCTGCCATTCCGTGCCATCGACTCCATC
TGCAACAAATAAGAATCCCCAATGTTGCATGTCCGCCCATAGGTATTCCC
ATCTTCTGTGAAGCCAATTGACCTTAGAGCTGGTCTTTTTGTTTCTCAGA
ACTTCCTGACGAGGTCTTGGGCAATCATTCTTCCCAGACATTCGTTTATC
TTGTTTTCCTCTTTCTTTCTCTCTCTTTTCCTCTGCCTCCGTCCTCCTAT
CCCGTTCATACTACTCGGAGACCATATAATCATATTCTTTCTGTCTCTCC
TCTGCCCAAATTTGCCAAGTAACAACAGAACTTCTATACTATATTGCCAG
AGCGGTGCCCAGCACTTTCGTTATTTTCTTCACCCCCGATAGCGCTGCGC
CCCCTGCGAGCACAGTGCGCAGTGTCAGTCCCGGTTTCTGTAGTTTGATT
CCGCATTGGCGAGAGATCGGGGGCGAAACTCGCACTTGGAGTGAAGTTTA
TAGCGACTGAAACAATCAATTGGCTTGAGGAGAGTAATCCTAGGCCTGAT
CAGATTGTTTCAATCATGGAGTTTCCATTCTTGCGAGCATTTATTGCCCT
CTTGTTAGTATTGACCTGAACTCTGGCCTGGAGCTTACTTTTGATGTATC
GCCAGTGGTTGGACATCTGATCGTATCAAGGTTCTCTGGCTGACTTTCCT
GATACATAGTTTATATCGCTACTTCCGCCTTGTTGTGAATCTCTTTTCTT
TCTGGACGTTCAAACCAATTCCTCCGCCGGAAAATCCGAAGTTAACTGCC
CAAGATGTAACGGTTATTTTACCAACGTTAGAGGGGTGTGGTGATGAACT
CGTGGAAACCATAAGAACGATTCTCGACACCCAGCCTTATGAACTTCTTC
TGGTCACCATTGAAGCGAATCGACAAAAGGCCGAGAATATGCTGAGCTTG
ATGCCCGCTTCGAAGTCAAGAATCCGCTTGTTCACCGTTACCCACCCCAA
CAAGCGCCGACAAATGACTAGAGCGATCCCGGAAGTCCGGACTACTATCA
CGGTATTCGCAGATGATGACGTGAGCTGGCCACGCACAGTCCTTCCTTGG
ATGCTAGCACCTTTTGAGAAGGATGAGCGATTCGGTGGTGTGGTAACTTG
CCAACGTCTACGACGGGCTGTTTCGCCATCATTTTCTCAACGCATATGGG
GATTTCTGGGCGCTCTTTACTTGGAACGAAGAAACTTCGATTGCGCGGCA
ACAACGCATATTGACGGTGGGCTTCCCTGCATGTCAGGCCGGACAGTCGC
ATACAGAACAGATATCCTTCAGAATGAAGGCTTCACGTATGGATTCACGA
ACGAGGAATGGTGGTTTGGGAAGTACCAATTGAACGCAGACGACGACAAT
TTCATTACCCGCTGGATGGTGTCACATGGCTGGGAGACTTTCATGCAATA
TCATCCTGAAGCGGAGGTCCTGACAACTCTGGAAGACAACCCCAAGTTTC
TCAAACAGTGCGCGCGCTGGTCCCGAAGCAACTGGAGGAGCAACCTTACA
AGCATGTTCCATGAAAAACACATCTGGTAGTAAGTTTACCCCTTTTAACT
TGTCTGGCGGGTGTGCGTACAGTGCACACCGGGACGGATGTCTATGTCCT
GCTATGAATTTGCCTTTCATTCACGGACCCTACTCGCTTCCTGCATCATT
AGTCAATGATGCCGTTGAATGCAAGATTTCCCTTCATTCTGATTATAATT
TCCCGGATACTACGACAGACTTAAGGAACTGGTCTTGGAAGGCTGGATCG
TTCTTAGTCTTGGTAACCGACTGTGGAAAATTTTTGTTTGGCCACTTAAT
GCAAATGTCTGTCTGATCCGCACGCTAACGTTTGGTTTACTGTAATACTA
GTCGCCAGCCTTGGAGCGCATACGCTGTCCACTTGACGACGCTTTCGCCG
CCAGCTCTCCTCGGCGATTTATTGCTCCTTATACTTTGTCACAAGGCTAC
GGTTTCTTGGGACAATGATACGCACGCGCTAGCTATGCAAGCTCTCGGAC
TGTGGATGTTTATAAGCAAGTTCATCAAACTTCTCGGACATTACATCCGT
TACCCGGTTGATGTTATCCTTTTGCCGGTGTCCATTCTCTTCGGCTATTT
TCACGGGGCTATTAAAATATACGCCGTGCTAACTCTGAACGTGGTAAGTT
GCAGCACCCCAACACAACATAAGTTCTGGTCCGTTGTTTCGTTTCTACAG
AGGGTGCATGTACAAGTGCAGCCTAGTATCTTTGGGCGACGCTTGTAGCA
TGGAAGTGGGCTCTAGCCCTTGGCCTGCTTCCGTGCTCGACACCCAACCC
CTCCCATAATGCAATTGCATTGGCCATGGGCCTCACCTCATTCTCGCCCT
TTCTGTATCCACCCACGGCCTTCCCCGTCTTGGTAACCCGCTTTTGCCTC
TGCATCGTTTTATTTTTTACTTGCGTTTCTTTTTGCCCTCTGGCCTTCTA
CTTTTGTCTTAGCTTGCTTGTCGCTTTTTCTTTCGGGTTTCTCTCCTCAT
TATTGGTCTCATTTCCCTTTTCTTATCATCTGTGCTTCGCTGTCCGAACA
ACCTAGTGCGGTGGCTGTTACTTGTTCCGTCTTATTGTCTGACCTCTGAT
TCTTCACTTTCTCACCCAACATCTGGCCTCTATTGAACGAAGACTACTCC
CTGCTATTCGACTCAGATTTGCTAACTAAACCTTTTTTTTTTTTTTTTTT
TTTTCAGACCACATGGGGTAGCAGAGACGGTGCCGATGATTATGACGCGG
AGCGGATGAAGAAGCGAACGGACACGGATCGTATGAAACGGCCTTATTAC
CCGAGTTACATAACTCAATGAAGCCCACATGCGCGATGTGTGGACGTGTG
TTAAATTACTAAATGCCTTTGCTTTTACCTTGAGCCAACCTTATATCGTG
TCCGTGGCTAGCGACTGCTCGCACTCCAGGCGTGCTTGCCCTGCTGGTTA
CTGAAGCTCGCCTATGATATCCCAGCGACCTTCCAGCAATCGCTCTAAAC
TCTCGGTTGCACGATACACAATTACGACGAAATGCCTTGATGACGCTAAA
TTGGGAGCCATGAGATTAGGGTTCCCATGGCCTTCAGTTGATGTATAACT
TCTCTTTGCACAAATATTCTTATCTTTCCACTTGACTCTTTCCCGGAGGT
TTTGTGGACCGATCCTGTTGCACGCACGGTCCCGTTCAAAAAAAACATCT
TTTCTACGCTCAGATTGACTTCTCTTTCTAACATATCCCCTGTATCTGTC
CTTTTCTCGCTGGTTGATTGGTGGTTGTCGTTTGGGTCCGCAACACCAGT
ACCTGACACTCGTCGACCCGACCTTACCACTCCTGAACACACAAGTTATT
TCAAGGATTCTGGGTTCTGTAAATTATAAAAGCGTGGGCGGATTCTTCTT
TTATCCAAATTGGCATTGCTAATTAATGTGCTGTTTCCCTCACTGTCGCC
TGTATGTTCAGGTTTTCCTTCCCTTTTCATCATCTTTGCTTTTCCTACCG
CTAGACTCTGCATGTGGGAAAATTTGCCGGAGAGTTCCATTTTCATTATC
GATTTGGGTCTATTCTCCTTCGTACACTCTATGCATAATACCTAATGCTC
AATATGCCATCAAGAGAATCAATTTGGAACATGCTGTGCTTATGAAAAGG
GTGCGATGCGATGTATCGCCATTCCGGAAATTTCGCTTGTAGATAAGCGT
CGCCAGGCATCGTCGCACATAGTGCTGCAACTGATACTCATATGTATTAT
CTCTCTTTTCACTCCCTCCGTACCATAACTACCTTTGTTTGCCCTTGTAA
GAAGCAGGTGGACAGCAGAACCACCTCTATTCTGCTGTCTTCATCATCTA
TCGTTGCTTCGATGCAGCGACCAGCAAATATTGTATGTGGCGTGAACTGT
GG back to topCoding sequence (CDS) from alignment at ch7:1317752..1321753- >KJC3_009751-T1 ID=KJC3_009751-T1|Name=KJC3_009751-T1|organism=Aspergillus niger KJC3|type=CDS|length=5256bp|location=Sequence derived from alignment at ch7:1317752..1321753- (Aspergillus niger KJC3)
ACCACATGGGGTAGCAGAGACGGTGCCGATGATTATGACGCGGAGCGGAT
GAAGAAGCGAACGGACACGGATCGTATGAAACGGCCTTATTACCCGAGTT
ACATAACTCAATGATCGCCAGCCTTGGAGCGCATACGCTGTCCACTTGAC
GACGCTTTCGCCGCCAGCTCTCCTCGGCGATTTATTGCTCCTTATACTTT
GTCACAAGGCTACGGTTTCTTGGGACAATGATACGCACGCGCTAGCTATG
CAAGCTCTCGGACTGTGGATGTTTATAAGCAAGTTCATCAAACTTCTCGG
ACATTACATCCGTTACCCGGTTGATGTTATCCTTTTGCCGGTGTCCATTC
TCTTCGGCTATTTTCACGGGGCTATTAAAATATACGCCGTGCTAACTCTG
AACGTGTTTATATCGCTACTTCCGCCTTGTTGTGAATCTCTTTTCTTTCT
GGACGTTCAAACCAATTCCTCCGCCGGAAAATCCGAAGTTAACTGCCCAA
GATGTAACGGTTATTTTACCAACGTTAGAGGGGTGTGGTGATGAACTCGT
GGAAACCATAAGAACGATTCTCGACACCCAGCCTTATGAACTTCTTCTGG
TCACCATTGAAGCGAATCGACAAAAGGCCGAGAATATGCTGAGCTTGATG
CCCGCTTCGAAGTCAAGAATCCGCTTGTTCACCGTTACCCACCCCAACAA
GCGCCGACAAATGACTAGAGCGATCCCGGAAGTCCGGACTACTATCACGG
TATTCGCAGATGATGACGTGAGCTGGCCACGCACAGTCCTTCCTTGGATG
CTAGCACCTTTTGAGAAGGATGAGCGATTCGGTGGTGTGGTAACTTGCCA
ACGTCTACGACGGGCTGTTTCGCCATCATTTTCTCAACGCATATGGGGAT
TTCTGGGCGCTCTTTACTTGGAACGAAGAAACTTCGATTGCGCGGCAACA
ACGCATATTGACGGTGGGCTTCCCTGCATGTCAGGCCGGACAGTCGCATA
CAGAACAGATATCCTTCAGAATGAAGGCTTCACGTATGGATTCACGAACG
AGGAATGGTGGTTTGGGAAGTACCAATTGAACGCAGACGACGACAATTTC
ATTACCCGCTGGATGGTGTCACATGGCTGGGAGACTTTCATGCAATATCA
TCCTGAAGCGGAGGTCCTGACAACTCTGGAAGACAACCCCAAGTTTCTCA
AACAGTGCGCGCGCTGGTCCCGAAGCAACTGGAGGAGCAACCTTACAAGC
ATGTTCCATGAAAAACACATCTGGTAATGGAGTTTCCATTCTTGCGAGCA
TTTATTGCCCTCTTACCACATGGGGTAGCAGAGACGGTGCCGATGATTAT
GACGCGGAGCGGATGAAGAAGCGAACGGACACGGATCGTATGAAACGGCC
TTATTACCCGAGTTACATAACTCAATGATCGCCAGCCTTGGAGCGCATAC
GCTGTCCACTTGACGACGCTTTCGCCGCCAGCTCTCCTCGGCGATTTATT
GCTCCTTATACTTTGTCACAAGGCTACGGTTTCTTGGGACAATGATACGC
ACGCGCTAGCTATGCAAGCTCTCGGACTGTGGATGTTTATAAGCAAGTTC
ATCAAACTTCTCGGACATTACATCCGTTACCCGGTTGATGTTATCCTTTT
GCCGGTGTCCATTCTCTTCGGCTATTTTCACGGGGCTATTAAAATATACG
CCGTGCTAACTCTGAACGTGTTTATATCGCTACTTCCGCCTTGTTGTGAA
TCTCTTTTCTTTCTGGACGTTCAAACCAATTCCTCCGCCGGAAAATCCGA
AGTTAACTGCCCAAGATGTAACGGTTATTTTACCAACGTTAGAGGGGTGT
GGTGATGAACTCGTGGAAACCATAAGAACGATTCTCGACACCCAGCCTTA
TGAACTTCTTCTGGTCACCATTGAAGCGAATCGACAAAAGGCCGAGAATA
TGCTGAGCTTGATGCCCGCTTCGAAGTCAAGAATCCGCTTGTTCACCGTT
ACCCACCCCAACAAGCGCCGACAAATGACTAGAGCGATCCCGGAAGTCCG
GACTACTATCACGGTATTCGCAGATGATGACGTGAGCTGGCCACGCACAG
TCCTTCCTTGGATGCTAGCACCTTTTGAGAAGGATGAGCGATTCGGTGGT
GTGGTAACTTGCCAACGTCTACGACGGGCTGTTTCGCCATCATTTTCTCA
ACGCATATGGGGATTTCTGGGCGCTCTTTACTTGGAACGAAGAAACTTCG
ATTGCGCGGCAACAACGCATATTGACGGTGGGCTTCCCTGCATGTCAGGC
CGGACAGTCGCATACAGAACAGATATCCTTCAGAATGAAGGCTTCACGTA
TGGATTCACGAACGAGGAATGGTGGTTTGGGAAGTACCAATTGAACGCAG
ACGACGACAATTTCATTACCCGCTGGATGGTGTCACATGGCTGGGAGACT
TTCATGCAATATCATCCTGAAGCGGAGGTCCTGACAACTCTGGAAGACAA
CCCCAAGTTTCTCAAACAGTGCGCGCGCTGGTCCCGAAGCAACTGGAGGA
GCAACCTTACAAGCATGTTCCATGAAAAACACATCTGGTAATGGAGTTTC
CATTCTTGCGAGCATTTATTGCCCTCTTACCACATGGGGTAGCAGAGACG
GTGCCGATGATTATGACGCGGAGCGGATGAAGAAGCGAACGGACACGGAT
CGTATGAAACGGCCTTATTACCCGAGTTACATAACTCAATGATCGCCAGC
CTTGGAGCGCATACGCTGTCCACTTGACGACGCTTTCGCCGCCAGCTCTC
CTCGGCGATTTATTGCTCCTTATACTTTGTCACAAGGCTACGGTTTCTTG
GGACAATGATACGCACGCGCTAGCTATGCAAGCTCTCGGACTGTGGATGT
TTATAAGCAAGTTCATCAAACTTCTCGGACATTACATCCGTTACCCGGTT
GATGTTATCCTTTTGCCGGTGTCCATTCTCTTCGGCTATTTTCACGGGGC
TATTAAAATATACGCCGTGCTAACTCTGAACGTGTTTATATCGCTACTTC
CGCCTTGTTGTGAATCTCTTTTCTTTCTGGACGTTCAAACCAATTCCTCC
GCCGGAAAATCCGAAGTTAACTGCCCAAGATGTAACGGTTATTTTACCAA
CGTTAGAGGGGTGTGGTGATGAACTCGTGGAAACCATAAGAACGATTCTC
GACACCCAGCCTTATGAACTTCTTCTGGTCACCATTGAAGCGAATCGACA
AAAGGCCGAGAATATGCTGAGCTTGATGCCCGCTTCGAAGTCAAGAATCC
GCTTGTTCACCGTTACCCACCCCAACAAGCGCCGACAAATGACTAGAGCG
ATCCCGGAAGTCCGGACTACTATCACGGTATTCGCAGATGATGACGTGAG
CTGGCCACGCACAGTCCTTCCTTGGATGCTAGCACCTTTTGAGAAGGATG
AGCGATTCGGTGGTGTGGTAACTTGCCAACGTCTACGACGGGCTGTTTCG
CCATCATTTTCTCAACGCATATGGGGATTTCTGGGCGCTCTTTACTTGGA
ACGAAGAAACTTCGATTGCGCGGCAACAACGCATATTGACGGTGGGCTTC
CCTGCATGTCAGGCCGGACAGTCGCATACAGAACAGATATCCTTCAGAAT
GAAGGCTTCACGTATGGATTCACGAACGAGGAATGGTGGTTTGGGAAGTA
CCAATTGAACGCAGACGACGACAATTTCATTACCCGCTGGATGGTGTCAC
ATGGCTGGGAGACTTTCATGCAATATCATCCTGAAGCGGAGGTCCTGACA
ACTCTGGAAGACAACCCCAAGTTTCTCAAACAGTGCGCGCGCTGGTCCCG
AAGCAACTGGAGGAGCAACCTTACAAGCATGTTCCATGAAAAACACATCT
GGTAATGGAGTTTCCATTCTTGCGAGCATTTATTGCCCTCTTACCACATG
GGGTAGCAGAGACGGTGCCGATGATTATGACGCGGAGCGGATGAAGAAGC
GAACGGACACGGATCGTATGAAACGGCCTTATTACCCGAGTTACATAACT
CAATGATCGCCAGCCTTGGAGCGCATACGCTGTCCACTTGACGACGCTTT
CGCCGCCAGCTCTCCTCGGCGATTTATTGCTCCTTATACTTTGTCACAAG
GCTACGGTTTCTTGGGACAATGATACGCACGCGCTAGCTATGCAAGCTCT
CGGACTGTGGATGTTTATAAGCAAGTTCATCAAACTTCTCGGACATTACA
TCCGTTACCCGGTTGATGTTATCCTTTTGCCGGTGTCCATTCTCTTCGGC
TATTTTCACGGGGCTATTAAAATATACGCCGTGCTAACTCTGAACGTGTT
TATATCGCTACTTCCGCCTTGTTGTGAATCTCTTTTCTTTCTGGACGTTC
AAACCAATTCCTCCGCCGGAAAATCCGAAGTTAACTGCCCAAGATGTAAC
GGTTATTTTACCAACGTTAGAGGGGTGTGGTGATGAACTCGTGGAAACCA
TAAGAACGATTCTCGACACCCAGCCTTATGAACTTCTTCTGGTCACCATT
GAAGCGAATCGACAAAAGGCCGAGAATATGCTGAGCTTGATGCCCGCTTC
GAAGTCAAGAATCCGCTTGTTCACCGTTACCCACCCCAACAAGCGCCGAC
AAATGACTAGAGCGATCCCGGAAGTCCGGACTACTATCACGGTATTCGCA
GATGATGACGTGAGCTGGCCACGCACAGTCCTTCCTTGGATGCTAGCACC
TTTTGAGAAGGATGAGCGATTCGGTGGTGTGGTAACTTGCCAACGTCTAC
GACGGGCTGTTTCGCCATCATTTTCTCAACGCATATGGGGATTTCTGGGC
GCTCTTTACTTGGAACGAAGAAACTTCGATTGCGCGGCAACAACGCATAT
TGACGGTGGGCTTCCCTGCATGTCAGGCCGGACAGTCGCATACAGAACAG
ATATCCTTCAGAATGAAGGCTTCACGTATGGATTCACGAACGAGGAATGG
TGGTTTGGGAAGTACCAATTGAACGCAGACGACGACAATTTCATTACCCG
CTGGATGGTGTCACATGGCTGGGAGACTTTCATGCAATATCATCCTGAAG
CGGAGGTCCTGACAACTCTGGAAGACAACCCCAAGTTTCTCAAACAGTGC
GCGCGCTGGTCCCGAAGCAACTGGAGGAGCAACCTTACAAGCATGTTCCA
TGAAAAACACATCTGGTAATGGAGTTTCCATTCTTGCGAGCATTTATTGC
CCTCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009751-T1.utr3p1 | KJC3_009751-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009751-T1.utr5p1 | KJC3_009751-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT2_Glyco_tranf_2_3 |
| DBxref | InterPro:IPR029044 |
| DBxref | PFAM:PF13506 |
| DBxref | PFAM:PF13641 |
| DBxref | PFAM:PF00535 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1317752..1321753 - |
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