|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1337401..1338867- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009755-T1 ID=KJC3_009755-T1|Name=KJC3_009755-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1467bp|location=Sequence derived from alignment at ch7:1337401..1338867- (Aspergillus niger KJC3) AACCAATTCACTAGGGCGACATATCCGAAATTTAAGAAAAGGCCGAGGGC
AAAGGGATAAATAAGGAAAGAAAGGGTAAATCCTAGAAGCTGAAATTCAG
TGCCGATACTCGTTTTTCTAGCCATTCTCCAGCTCAAGAGCTTTACCTCC
TACAACATATCGAGTCAGCTGGCTTTGTCCGTGTGTCTTTTTGTCTTCAA
CCATCATGAGCACCCAGAACACCAACGCTCAGGTACGTGCATTGAACTCT
CATTACATAGGGTCAATGGTGGCTCGTCACTCCCACCATCAGCCCAAAGT
GGCACAACCGAAATGATCGCTAATGACCTCAACCATTACCAGAATCTTTC
CTTCGTCCTCGAGGGAATTCACCGCGTCAAATTCGAAGACCGGCCAATCC
CAGAGATCAACAATCCTCACGACGTACTGGTGAATGTCAGGTTCACAGGT
ATATGTGGTAGTGATGTGCGTATCACCGAAGCCCACGAGACAGAATCAAA
GGCCTGCCTAGCTGACATGTCGGATATTTTCACCCTCAAGGTTCATTATT
GGGAACATGGCTCCATTGGCCAATTCATTGTCAAGGATCCCATGGTCCTG
GGACATGAATCTTCCGGTGTTGTCAGCAAGGTTGGCTCTGCCGTTACCAG
TCTAAAGGTAGGAGACTGCGTTGCAATGGAACCAGGAATCCCATGTCGCC
GCTGCGAACCATGCAAGGCGGGGAAATATAATCTCTGCGTGAAAATGGCT
TTCGCAGCGACACCTCCATATGATGGTACCTTGGCCAAGTATTACGTCCT
GCCCGAGGACTTTTGCTATAAGCTTCCTGAAAGCATCACCCTACAGGAGG
GTGCGATCATGGAGCCCCTTAGTGTCGCCGTCCATATCGTTAAACAGGCT
GGGATCAACCCGGGTCAATCAGTGGTAGTCTTTGGTGCTGGCCCCGTCGG
ACTTCTCTGCTGTGCTGTGGCGAAGGCTTACGGTGCGTCCAAGGTTATCG
CGGTTGACATTCAAAAGGGTAGGCTAGACTTTGCCAAGAAGTATGCAGCA
ACTGCCACGTTTGAGCCAGCTAAAGCCGCAGCGTTGGAGAACGCTCAACG
GATAATAACCGAGAATGATCTAGGCTCGGGTGCAGATGTTGCCATTGACG
CTTCAGGAGCAGAGCCCTCGGTTCATACAGGCATTCACGTTCTGCGTGCT
GGGGGAACATATGTCCAGGGCGGTATGGGTAGAAGCGAAATCACCTTTCC
AATAATGGCGGCTTGCACCAAAGAACTGAACGTCAAGGGCAGCTTCCGTT
ATGGGAGTGGTGACTATAAGCTTGCAGTCTCCTTAGTAAGCGCTGGAAAG
GTGAACGTGAAGGAATTGATCACGGGTGTCGTCAAGTTCGAGGACGCCGA
GCGAGCATTCGAAGAAGTTAGAGCTGGAAAGGGCATCAAAACGCTTATTG
CTGGTGTCGATTCATAG back to topCoding sequence (CDS) from alignment at ch7:1337401..1338867- >KJC3_009755-T1 ID=KJC3_009755-T1|Name=KJC3_009755-T1|organism=Aspergillus niger KJC3|type=CDS|length=3231bp|location=Sequence derived from alignment at ch7:1337401..1338867- (Aspergillus niger KJC3) GTTCATTATTGGGAACATGGCTCCATTGGCCAATTCATTGTCAAGGATCC CATGGTCCTGGGACATGAATCTTCCGGTGTTGTCAGCAAGGTTGGCTCTG CCGTTACCAGTCTAAAGGTAGGAGACTGCGTTGCAATGGAACCAGGAATC CCATGTCGCCGCTGCGAACCATGCAAGGCGGGGAAATATAATCTCTGCGT GAAAATGGCTTTCGCAGCGACACCTCCATATGATGGTACCTTGGCCAAGT ATTACGTCCTGCCCGAGGACTTTTGCTATAAGCTTCCTGAAAGCATCACC CTACAGGAGGGTGCGATCATGGAGCCCCTTAGTGTCGCCGTCCATATCGT TAAACAGGCTGGGATCAACCCGGGTCAATCAGTGGTAGTCTTTGGTGCTG GCCCCGTCGGACTTCTCTGCTGTGCTGTGGCGAAGGCTTACGGTGCGTCC AAGGTTATCGCGGTTGACATTCAAAAGGGTAGGCTAGACTTTGCCAAGAA GTATGCAGCAACTGCCACGTTTGAGCCAGCTAAAGCCGCAGCGTTGGAGA ACGCTCAACGGATAATAACCGAGAATGATCTAGGCTCGGGTGCAGATGTT GCCATTGACGCTTCAGGAGCAGAGCCCTCGGTTCATACAGGCATTCACGT TCTGCGTGCTGGGGGAACATATGTCCAGGGCGGTATGGGTAGAAGCGAAA TCACCTTTCCAATAATGGCGGCTTGCACCAAAGAACTGAACGTCAAGGGC AGCTTCCGTTATGGGAGTGGTGACTATAAGCTTGCAGTCTCCTTAGTAAG CGCTGGAAAGGTGAACGTGAAGGAATTGATCACGGGTGTCGTCAAGTTCG AGGACGCCGAGCGAGCATTCGAAGAAGTTAGAGCTGGAAAGGGCATCAAA ACGCTTATTGCTGGTGTCGATTCATAGAATCTTTCCTTCGTCCTCGAGGG AATTCACCGCGTCAAATTCGAAGACCGGCCAATCCCAGAGATCAACAATC CTCACGACGTACTGGTGAATGTCAGGTTCACAGGTATATGTGGTAGTGAT ATGAGCACCCAGAACACCAACGCTCAGGTTCATTATTGGGAACATGGCTC CATTGGCCAATTCATTGTCAAGGATCCCATGGTCCTGGGACATGAATCTT CCGGTGTTGTCAGCAAGGTTGGCTCTGCCGTTACCAGTCTAAAGGTAGGA GACTGCGTTGCAATGGAACCAGGAATCCCATGTCGCCGCTGCGAACCATG CAAGGCGGGGAAATATAATCTCTGCGTGAAAATGGCTTTCGCAGCGACAC CTCCATATGATGGTACCTTGGCCAAGTATTACGTCCTGCCCGAGGACTTT TGCTATAAGCTTCCTGAAAGCATCACCCTACAGGAGGGTGCGATCATGGA GCCCCTTAGTGTCGCCGTCCATATCGTTAAACAGGCTGGGATCAACCCGG GTCAATCAGTGGTAGTCTTTGGTGCTGGCCCCGTCGGACTTCTCTGCTGT GCTGTGGCGAAGGCTTACGGTGCGTCCAAGGTTATCGCGGTTGACATTCA AAAGGGTAGGCTAGACTTTGCCAAGAAGTATGCAGCAACTGCCACGTTTG AGCCAGCTAAAGCCGCAGCGTTGGAGAACGCTCAACGGATAATAACCGAG AATGATCTAGGCTCGGGTGCAGATGTTGCCATTGACGCTTCAGGAGCAGA GCCCTCGGTTCATACAGGCATTCACGTTCTGCGTGCTGGGGGAACATATG TCCAGGGCGGTATGGGTAGAAGCGAAATCACCTTTCCAATAATGGCGGCT TGCACCAAAGAACTGAACGTCAAGGGCAGCTTCCGTTATGGGAGTGGTGA CTATAAGCTTGCAGTCTCCTTAGTAAGCGCTGGAAAGGTGAACGTGAAGG AATTGATCACGGGTGTCGTCAAGTTCGAGGACGCCGAGCGAGCATTCGAA GAAGTTAGAGCTGGAAAGGGCATCAAAACGCTTATTGCTGGTGTCGATTC ATAGAATCTTTCCTTCGTCCTCGAGGGAATTCACCGCGTCAAATTCGAAG ACCGGCCAATCCCAGAGATCAACAATCCTCACGACGTACTGGTGAATGTC AGGTTCACAGGTATATGTGGTAGTGATATGAGCACCCAGAACACCAACGC TCAGGTTCATTATTGGGAACATGGCTCCATTGGCCAATTCATTGTCAAGG ATCCCATGGTCCTGGGACATGAATCTTCCGGTGTTGTCAGCAAGGTTGGC TCTGCCGTTACCAGTCTAAAGGTAGGAGACTGCGTTGCAATGGAACCAGG AATCCCATGTCGCCGCTGCGAACCATGCAAGGCGGGGAAATATAATCTCT GCGTGAAAATGGCTTTCGCAGCGACACCTCCATATGATGGTACCTTGGCC AAGTATTACGTCCTGCCCGAGGACTTTTGCTATAAGCTTCCTGAAAGCAT CACCCTACAGGAGGGTGCGATCATGGAGCCCCTTAGTGTCGCCGTCCATA TCGTTAAACAGGCTGGGATCAACCCGGGTCAATCAGTGGTAGTCTTTGGT GCTGGCCCCGTCGGACTTCTCTGCTGTGCTGTGGCGAAGGCTTACGGTGC GTCCAAGGTTATCGCGGTTGACATTCAAAAGGGTAGGCTAGACTTTGCCA AGAAGTATGCAGCAACTGCCACGTTTGAGCCAGCTAAAGCCGCAGCGTTG GAGAACGCTCAACGGATAATAACCGAGAATGATCTAGGCTCGGGTGCAGA TGTTGCCATTGACGCTTCAGGAGCAGAGCCCTCGGTTCATACAGGCATTC ACGTTCTGCGTGCTGGGGGAACATATGTCCAGGGCGGTATGGGTAGAAGC GAAATCACCTTTCCAATAATGGCGGCTTGCACCAAAGAACTGAACGTCAA GGGCAGCTTCCGTTATGGGAGTGGTGACTATAAGCTTGCAGTCTCCTTAG TAAGCGCTGGAAAGGTGAACGTGAAGGAATTGATCACGGGTGTCGTCAAG TTCGAGGACGCCGAGCGAGCATTCGAAGAAGTTAGAGCTGGAAAGGGCAT CAAAACGCTTATTGCTGGTGTCGATTCATAGAATCTTTCCTTCGTCCTCG AGGGAATTCACCGCGTCAAATTCGAAGACCGGCCAATCCCAGAGATCAAC AATCCTCACGACGTACTGGTGAATGTCAGGTTCACAGGTATATGTGGTAG TGATATGAGCACCCAGAACACCAACGCTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009755-T1.utr5p1 | KJC3_009755-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR011032 |
DBxref | InterPro:IPR036291 |
DBxref | InterPro:IPR002328 |
DBxref | InterPro:IPR013154 |
DBxref | InterPro:IPR013149 |
DBxref | InterPro:IPR020843 |
DBxref | PFAM:PF00107 |
DBxref | PFAM:PF08240 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:1337401..1338867 - |
|