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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1475799..1478147- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009770-T1 ID=KJC3_009770-T1|Name=KJC3_009770-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2349bp|location=Sequence derived from alignment at ch7:1475799..1478147- (Aspergillus niger KJC3)
AAAGACGAAAGGACTCGCGGTTCATTCATTGCCTAGCCCAGAACCAAGTC
ACCAACAGGTCGATTACAGAGTCCGGGTCCATGAGCCCACACCTTGGTGT
CCTTTATCGTGCTCTCTCAATCAGTTTCAGATTCCGCAGTGATCGCGCAA
TTGCCCGCTGCACCGCCCTAGGAATCCAACAACGCCCGCCACTCCGCCGA
TTCTACTCTACCCGCTCATCGGCTGCGGAGATGGCTGAACAATTGATACA
GTATGACGGCACTGAGTACAGAGCAGTGAAGGAAGGATTGGCGTACATTC
TGAACCCCCCGGCTCAGGCTCCCGGTACGAAAAGGGATCGCAAAGCTGAC
GAGCAATCGCAATCAGTCTTCTACAACCCTATTCAACAATTCAACCGGGA
CCTTAGTGTCCTTGCCATTCGCGCATATGGGGAGCATTTGCTGGCCTTGA
AGAAACAGAAGGCCGAGAAGAAGAAGCAAAAGGCTGCGGCGAACGACTCC
GCGAAGGGCAAGAAACGCAAGAGAGAAGAGGTCGATGGCAAGGAACAAAC
GCAGGATCAGAATCAAGGCCAAGGGGATCAGACTGCAGCACAGCAGGCAG
AGCAGGACACGGCGCCATCTTTTACGATTCTAGACGCCCTCTCGGCTACG
GGTCTGCGTGCCCTGCGATATGCTTCGGAGATACCTTTCACTTCTTGCGT
CGTCGCAAACGACCTGTCGCCCTCGGCCATTGAATCCATGAAGACGAACA
TCAAATACAACAGTCTCGGCGAAAAAATCCGTCCCAACACCGGGGATGCG
CGCTCTTACATGTACAGTCTTCTAAACCAACAAGCCAATACCCCAACTTC
CGAGAGCCACCTAGGAAAATTCGACGTGATTGATCTGGACCCTTACGGCT
CTGCTGCACCTTTTATGGACGCTGCGGTTCAGGGAGTCAAGGATGGCGGT
CTTCTTTGTGTTACCTGTACCGATGCAGGTGTCTGGGCCTCGTACGGGTA
TCCCGAGAAGTCGTTCGCCCTATACGGCGGAATCCCAGTCAAAGGACCGC
ATTGCCATGAAGGTGGCCTGCGTCTCATCCTGCACGGGCTTGCAGCCTCC
GCTGCGAAATATGGTCTCGCGATTGAGCCACTTCTCTCCCTATCGATCGA
CTTTTATGCCCGAGTCTTCGTCCGTGTCCACCGCTCTCCGGCCGAAGTCA
AGTATATCTCTGGAAACATGATGATGGTCTATAATTGCGATGCTGGCTGT
GGCGCGTGGTCAACTCAGCCTATCACCCAGACGAAACAGAAGCTGGACAA
GAAAGGAAATCCGTTCTACCACTTCGGCTTCGCTCAGGGTCCGGTAGCAG
ATAGTCGTTGTGGCCATTGTGGCTCTAGGACTCACCTCAGCGGTCCTATG
TGGGCTGGCCCTCTTCACAATGCACAATTTATCCGCAGAATCCTTGATAT
GCTCCCCCAGGCAGATAGGAACGTGTATCACACGATTGACCGGATTGAGG
GAATGCTGACTACGGCAATGGAAGAAGATCTGAATCTAGGAATTTCTAGT
GACGAAGCAAACCAGACACCTACTGGCACAGTTGGTGGGGATATCTCCGA
GAACGAATACTCTGCAATCATCCCGCGGCTCGATCCCGCCGCCCGGGAAG
AATACCCCTTCTACTTCAGTCTTAGCGCCTTATCCAAAGTCTTGCATACA
TCCACAATTTCCATTGATGCCATGCGTGGGGCTATTCGACACCTTGGCTA
TCGATCAACCCGCAGCCACGCCAGACCGAATACGATTCGTACCGATGCTC
CTTGGGAGGTGATCTGGGAGATCATGAGGGAATGGGTGAGACAGAAGTCT
CCCATCAGAGAAGGCGCCCTAAAGCCCGGAAGTCCCGGCGCTGTCATTAT
GTCCAAGAGCAGGGAGAACATTCAAGGCCGTGAGGGGGAAGACCCGTCTC
TGGCGCTTCTCAAGACCGAGCTTCAAGCAGTCACAGAGGAAGCAAAAGAT
GTCAAAGATATGATTACCAAAATTGAAGCTGCCTTGTATCGCTCCGGTGC
CCGTCAAGCGTTGGGGAGGAAGAGAAGGGAATCTGATCCTCCGCGTGAAC
AGCCGGGAACAACGCAGAAGGATCTCCAGGACACAAAGCCTCCCCGTAGC
CCCAATGGTGCAGGCAGACCGCACCCTAGCACGCTGGAGGTTGTATTCGA
TGAGGCCTTGGGTAGGGAGACGGCCAAGAAGCGACTGGTGCGGTATCAAA
TTAATCCTCGTGAGAACTGGGGTCCTCTGAGCCGAGCATCCGGAGGCAAG
TAGATATTAAGTTCAATTATACGGATTAATCTATGTTGAAATACTGAAC back to topCoding sequence (CDS) from alignment at ch7:1475799..1478147- >KJC3_009770-T1 ID=KJC3_009770-T1|Name=KJC3_009770-T1|organism=Aspergillus niger KJC3|type=CDS|length=1566bp|location=Sequence derived from alignment at ch7:1475799..1478147- (Aspergillus niger KJC3)
ATGAAGACGAACATCAAATACAACAGTCTCGGCGAAAAAATCCGTCCCAA
CACCGGGGATGCGCGCTCTTACATGTACAGTCTTCTAAACCAACAAGCCA
ATACCCCAACTTCCGAGAGCCACCTAGGAAAATTCGACGTGATTGATCTG
GACCCTTACGGCTCTGCTGCACCTTTTATGGACGCTGCGGTTCAGGGAGT
CAAGGATGGCGGTCTTCTTTGTGTTACCTGTACCGATGCAGGTGTCTGGG
CCTCGTACGGGTATCCCGAGAAGTCGTTCGCCCTATACGGCGGAATCCCA
GTCAAAGGACCGCATTGCCATGAAGGTGGCCTGCGTCTCATCCTGCACGG
GCTTGCAGCCTCCGCTGCGAAATATGGTCTCGCGATTGAGCCACTTCTCT
CCCTATCGATCGACTTTTATGCCCGAGTCTTCGTCCGTGTCCACCGCTCT
CCGGCCGAAGTCAAGTATATCTCTGGAAACATGATGATGGTCTATAATTG
CGATGCTGGCTGTGGCGCGTGGTCAACTCAGCCTATCACCCAGACGAAAC
AGAAGCTGGACAAGAAAGGAAATCCGTTCTACCACTTCGGCTTCGCTCAG
GGTCCGGTAGCAGATAGTCGTTGTGGCCATTGTGGCTCTAGGACTCACCT
CAGCGGTCCTATGTGGGCTGGCCCTCTTCACAATGCACAATTTATCCGCA
GAATCCTTGATATGCTCCCCCAGGCAGATAGGAACGTGTATCACACGATT
GACCGGATTGAGGGAATGCTGACTACGGCAATGGAAGAAGATCTGAATCT
AGGAATTTCTAGTGACGAAGCAAACCAGACACCTACTGGCACAGTTGGTG
GGGATATCTCCGAGAACGAATACTCTGCAATCATCCCGCGGCTCGATCCC
GCCGCCCGGGAAGAATACCCCTTCTACTTCAGTCTTAGCGCCTTATCCAA
AGTCTTGCATACATCCACAATTTCCATTGATGCCATGCGTGGGGCTATTC
GACACCTTGGCTATCGATCAACCCGCAGCCACGCCAGACCGAATACGATT
CGTACCGATGCTCCTTGGGAGGTGATCTGGGAGATCATGAGGGAATGGGT
GAGACAGAAGTCTCCCATCAGAGAAGGCGCCCTAAAGCCCGGAAGTCCCG
GCGCTGTCATTATGTCCAAGAGCAGGGAGAACATTCAAGGCCGTGAGGGG
GAAGACCCGTCTCTGGCGCTTCTCAAGACCGAGCTTCAAGCAGTCACAGA
GGAAGCAAAAGATGTCAAAGATATGATTACCAAAATTGAAGCTGCCTTGT
ATCGCTCCGGTGCCCGTCAAGCGTTGGGGAGGAAGAGAAGGGAATCTGAT
CCTCCGCGTGAACAGCCGGGAACAACGCAGAAGGATCTCCAGGACACAAA
GCCTCCCCGTAGCCCCAATGGTGCAGGCAGACCGCACCCTAGCACGCTGG
AGGTTGTATTCGATGAGGCCTTGGGTAGGGAGACGGCCAAGAAGCGACTG
GTGCGGTATCAAATTAATCCTCGTGAGAACTGGGGTCCTCTGAGCCGAGC
ATCCGGAGGCAAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008033 | tRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009770-T1.utr3p1 | KJC3_009770-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR002905 |
| DBxref | InterPro:IPR042296 |
| DBxref | PFAM:PF02005 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1475799..1478147 - |
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