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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1478253..1479680- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009771-T1 ID=KJC3_009771-T1|Name=KJC3_009771-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1428bp|location=Sequence derived from alignment at ch7:1478253..1479680- (Aspergillus niger KJC3)
GATCAAGTTCCAAGGAAATCTGCTTTCCCAAATTACAGCGAGGAATTGTT
GTTCAACGACCATGCTTTGAGTCCAGATAATCCCATCGCAACCGGTTTGA
TCGCAATATTCGACCAGCCCTAGTTCTGGCTCCTGGCGCGGACATACATA
ACATAGCACCTGGTAGCCGGGTGCTGTTTTTTTTTGAGCCATGGCTGCCT
CGAAAGAAAGCATGCCATCCAAACCAGAGGATATCGAAACGCGCTCCATA
TTTTCAATGCAAGAGTTAGACCCATCACCAGTACAAGATGAGTTTCCAGA
CCTTGAATCTGGTGACTACTTCCCCAGAGAACCAAGTCCGCCATCGGCAC
GCGAGCCCATCGCCGGGGGTGGTCGGTTCTCGTCGCTCAAGTTAGGCCTT
CGCGGACATAGTTGGGATTCCTGGTGTATGGCTAAGTATATGCAAGCTAT
TGTGATAATAGCAAGAATTTACTCTTTTCCTAGAAGCTAACAGTGGCCTC
AAATTCTCCAGTATCTGCGTTCCAACGATACTCGACGTATCCACCGACCC
TATTCTTTGCATTGCATTGGGCCAATACCTCTCTCATCCCTCTGGCTACT
CGATCTGTGCCCGACAGCGAGAGCTTCCTGCTTCTCACCAGACCCGTCTA
TCAATCTCCGGGCCTCGAACATCTCGTTCTGACCGCGCCTGTTCTGATTC
ATATTGCGTCTGGAATTGCTTTGCGCAACATCCGCTCCGCACGGCGGGCT
CGACTCTATGGCGCCGAGACAAGGTCACAGAGACACTCCTTGACGTTTTG
GCCTCGGATGAGCCTCCAAGCTCGGTTAGGATATTCCTTAGTTCCGTTAC
TCGGCGTCCATGTGCTCGTCAACCGCATCACTCCGTTGATGGTTGATGGG
GGAAGCTCGGGAGTCGGGCTGGGTTATGTGGCCCACGGCTTTGCACGGGC
CCCCGCACTCTGGAATCTGTACTATTTGTTATTCGTCGCCGTTGGGGTGT
GGCACTTCGTCGGCGGCTGGGCTGCATGGATGGGCTGGAGAGTGACAACG
GTCCGGAAGGAACGTGACCGAAAGAAAGGCTCCCTAGAGGGTTATCTGGG
AGCCTCGGAAAGTGAGCAACGACTCCGCCGACAGAGGAAGATGTGGTGGA
CGGTCAACGGCATTGCCGCGGTGGGAGCATCCATATGGCTTGCAGGTGCC
CTGGGAATCATCGGGCGTACGGGGCAGGGTTATGGCTGGGAGGCCAAGGG
ATGGAATGAGATCTACAGCCAGGTCCCCGTTATTGGGTCCTGGCTCTGAC
CCAATTCATTGGACAAAGATAATTCTTTTGACACGGGAGTAACGGCCGAT
ATGATTGTATAATAAGCAAGAAGCAAGACTTAATGTTAATGACAGCGCCG
ATCGAATGGGAAGACGGAATGAAATGAG back to topCoding sequence (CDS) from alignment at ch7:1478253..1479680- >KJC3_009771-T1 ID=KJC3_009771-T1|Name=KJC3_009771-T1|organism=Aspergillus niger KJC3|type=CDS|length=2046bp|location=Sequence derived from alignment at ch7:1478253..1479680- (Aspergillus niger KJC3)
TATCTGCGTTCCAACGATACTCGACGTATCCACCGACCCTATTCTTTGCA
TTGCATTGGGCCAATACCTCTCTCATCCCTCTGGCTACTCGATCTGTGCC
CGACAGCGAGAGCTTCCTGCTTCTCACCAGACCCGTCTATCAATCTCCGG
GCCTCGAACATCTCGTTCTGACCGCGCCTGTTCTGATTCATATTGCGTCT
GGAATTGCTTTGCGCAACATCCGCTCCGCACGGCGGGCTCGACTCTATGG
CGCCGAGACAAGGTCACAGAGACACTCCTTGACGTTTTGGCCTCGGATGA
GCCTCCAAGCTCGGTTAGGATATTCCTTAGTTCCGTTACTCGGCGTCCAT
GTGCTCGTCAACCGCATCACTCCGTTGATGGTTGATGGGGGAAGCTCGGG
AGTCGGGCTGGGTTATGTGGCCCACGGCTTTGCACGGGCCCCCGCACTCT
GGAATCTGTACTATTTGTTATTCGTCGCCGTTGGGGTGTGGCACTTCGTC
GGCGGCTGGGCTGCATGGATGGGCTGGAGAGTGACAACGGTCCGGAAGGA
ACGTGACCGAAAGAAAGGCTCCCTAGAGGGTTATCTGGGAGCCTCGGAAA
GTGAGCAACGACTCCGCCGACAGAGGAAGATGTGGTGGACGGTCAACGGC
ATTGCCGCGGTGGGAGCATCCATATGGCTTGCAGGTGCCCTGGGAATCAT
CGGGCGTACGGGGCAGGGTTATGGCTGGGAGGCCAAGGGATGGAATGAGA
TCTACAGCCAGGTCCCCGTTATTGGGTCCTGGCTCTGAATGGCTGCCTCG
AAAGAAAGCATGCCATCCAAACCAGAGGATATCGAAACGCGCTCCATATT
TTCAATGCAAGAGTTAGACCCATCACCAGTACAAGATGAGTTTCCAGACC
TTGAATCTGGTGACTACTTCCCCAGAGAACCAAGTCCGCCATCGGCACGC
GAGCCCATCGCCGGGGGTGGTCGGTTCTCGTCGCTCAAGTTAGGCCTTCG
CGGACATAGTTGGGATTCCTGGTTATCTGCGTTCCAACGATACTCGACGT
ATCCACCGACCCTATTCTTTGCATTGCATTGGGCCAATACCTCTCTCATC
CCTCTGGCTACTCGATCTGTGCCCGACAGCGAGAGCTTCCTGCTTCTCAC
CAGACCCGTCTATCAATCTCCGGGCCTCGAACATCTCGTTCTGACCGCGC
CTGTTCTGATTCATATTGCGTCTGGAATTGCTTTGCGCAACATCCGCTCC
GCACGGCGGGCTCGACTCTATGGCGCCGAGACAAGGTCACAGAGACACTC
CTTGACGTTTTGGCCTCGGATGAGCCTCCAAGCTCGGTTAGGATATTCCT
TAGTTCCGTTACTCGGCGTCCATGTGCTCGTCAACCGCATCACTCCGTTG
ATGGTTGATGGGGGAAGCTCGGGAGTCGGGCTGGGTTATGTGGCCCACGG
CTTTGCACGGGCCCCCGCACTCTGGAATCTGTACTATTTGTTATTCGTCG
CCGTTGGGGTGTGGCACTTCGTCGGCGGCTGGGCTGCATGGATGGGCTGG
AGAGTGACAACGGTCCGGAAGGAACGTGACCGAAAGAAAGGCTCCCTAGA
GGGTTATCTGGGAGCCTCGGAAAGTGAGCAACGACTCCGCCGACAGAGGA
AGATGTGGTGGACGGTCAACGGCATTGCCGCGGTGGGAGCATCCATATGG
CTTGCAGGTGCCCTGGGAATCATCGGGCGTACGGGGCAGGGTTATGGCTG
GGAGGCCAAGGGATGGAATGAGATCTACAGCCAGGTCCCCGTTATTGGGT
CCTGGCTCTGAATGGCTGCCTCGAAAGAAAGCATGCCATCCAAACCAGAG
GATATCGAAACGCGCTCCATATTTTCAATGCAAGAGTTAGACCCATCACC
AGTACAAGATGAGTTTCCAGACCTTGAATCTGGTGACTACTTCCCCAGAG
AACCAAGTCCGCCATCGGCACGCGAGCCCATCGCCGGGGGTGGTCGGTTC
TCGTCGCTCAAGTTAGGCCTTCGCGGACATAGTTGGGATTCCTGGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009771-T1.utr3p1 | KJC3_009771-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009771-T1.utr5p1 | KJC3_009771-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR034804 |
| DBxref | InterPro:IPR012472 |
| DBxref | PFAM:PF07950 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1478253..1479680 - |
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