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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1489699..1492199- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009777-T1 ID=KJC3_009777-T1|Name=KJC3_009777-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2501bp|location=Sequence derived from alignment at ch7:1489699..1492199- (Aspergillus niger KJC3)
GTGATGCAGGAGGGGCCGCGAAGCTTGCAAGGAGAGTTCAACCAACAACT
AATTGACCTTATACAGCTGTCCAAAAATTGATTGCGGCCCATTTCATACA
TCCAACGAGCTCGTTCAAAGTCGTGTTGACCAGCAGCCCTTGTGGTGAGT
CCCAGGGCACTCCGAACCCACTTCCGCGTTCCTCATTTCCAACTATCTAT
ATGGTGTTCAGGCATAGTACATATGGTACCTTCAACATCCCTTGGAGAAT
CAGCTGTGAACCCAAAGATGAGAATACAAAGATAGCTCTGGATTTCACTA
GCTTCACATGTGATTCTGACCTTCTTTGACTTTTTCCACAGGCATTATTG
CGACCCCGGGTTACCCTTGATACTGTAACATCACCTCCACTCATCATATA
CCAAGGCTTCTAGTACTCTTGATAGAGTTGCTTCACTCCGAGGCCTGTAC
ATTCAATACGAAAAAGCTGTGGTTGCAGTATATCCAGCTGGCTTTCCCTG
TCGTTGCTGATACCGAATCATATGCGCAAATTACACCGTGTTGGGCTCCC
ACAAACAAGTATTCCACATTGACTTCTATCATATCTGATATCACTCCGGA
TTATACGCTCTCACACTGAGCATTGCCCTAGTTGGGTCAAAATAACAATG
GCTTCCACACAACCGGCTGGGTCCTCTGCACCCTCGTCTAACCTGAACTC
TCCGATCTTGCCTCCTGGAGGAACACCATTCTTCACCGGTTCCTTTCCCG
ATTCTAATGCGAGATCTTCTCCCATACCTACTAGTAACGCCCCTGCGCAA
GCTGATGGATCGAAATCGAAACGCACCAAACGTGATAGCCGCAAAAAGCG
TGAGGCCAAGGGTCTGGATCAGGAAAGCATGCCACCGAAGAAGCGAGCAG
TTGCTGTCCAAAACACTGCACTTCCCAGCTCGGATCTCAGCATACTAAGG
CCTCTCCTGTTGGCAGAGCCTCGCTCATCCGATCTGTTACCCCCACAACC
CCGGCAGCTGAACTTTGTCAACCGAAAAACATCAGACGTTATCGGTCAGA
GCTGGGACTTTTTTGAGATTGTCGATAAGCTCACCAATAAGAATGGGTTT
CGTTATAGCTACGCCATAGCTGATCCAAGCTTTCCGCATATCAAATACCG
TCAGACTGATGTCCAGCCCTATCACGCCCGATTTAGTTTCGAAGACTCTC
CAGCTGCCATACTCTTCAGTAAGGACGCTCTCGCAGTTACTTCTAATGAG
CCTTGGCATACGGCACGAGCCAATGTCTGCGCGCGCGAGGGATCCTATTA
CTACGAAGCGCGCATTATCAGTGGTGTTGTGAATAATTCGCCTGCTCCCT
CTTCTAATAGCAATGGAGGCTTACCGTCCAGGGGGCATGTGCGTCTTGGT
TTTGCACGAAGGGAGGGAGACCTCGATGCCAACGTTGGTGTTGACTGTTA
TGGCTACGGTATCCGTGATGTGAATGGTGAGGTCGTCAATCGGATGCGGT
GTGAATACTTTTTTCCAAAAGGCGAATCTATTCGTGAGGGCGACGTTGTC
GGCCTTCTAATCACCCTTCCGCCACTCTCTCTCCACAAGAAAGTTGTAGA
GGGAACTTATGAGTCAAGTGCAGATGGCGAGGTCTCATCACCAAGCTCAG
AAGCCCCGTCAGTCACGAATATAGTTCGTGACCGCATTCCTTTCCACTAC
AAATCAGACTTTTGTTGGCAACAGTCGAACGTGTTTCCAACAAAACAGCT
ACGCGACTACGCATTCAATCTCAAAGAAACCCCTACGTTTGGGCCTCCAT
CTCCGTTCAATGCCGAGGATGCATCTTTGCGAACGTTACCCGGTTCAAGC
ATCACAATATTCAAGAACGGTGTAAAGATGGGCACTCCTTTTGAAGAACT
GTATGCTTTCTTACCACCGGCCAGCCGACTCGCCAATGGCACAAACAACT
TGGGCATCGGCGAGCGCGAGAATGCAGATGACGGAATGATCGGTTATTAT
CCTGCTGTCAGCTGCTACGGCGGAGGGGCGGTTGAATGCCGCTTTGACGG
GCCATGGTGGGTGGGGCCACCATCTCATACGGACAACGGCGAGCCAGTCC
GGGGCATCGGCGAACGCTTCAACGAACAAATAGTTGAGGATATAGTTGCC
GATATCGTGGACGAGGTTGAGGCAATGTGCGTCTGGGGCGGAGTAGACGG
CAACGTTGTCAACAATGCAAAGATCGATGGCTCTGGAACTGGGGCAGTTG
GTGGCTCCGAGGTGTTGAAAGGTGGTGTTAGTGCGGCTTATGAGTCTGCT
ATTCCTCCAGTTGCGGACGGCCAGAGTGAGTCTGCTGCTAATCCCGCTGG
CAATGGCAACGAAGCGGGAAGCGTCATGGACCTAGATCCAGGCCAGGCCG
CGCTTGAGGACGCCACGCGCGCCGATGCCCCGGTTCCAGAAGCACCCCAG
AATACGATTCCCGACACGTCAACTGGGGATGGCGATGTTGAAATGTCTTG
A back to topCoding sequence (CDS) from alignment at ch7:1489699..1492199- >KJC3_009777-T1 ID=KJC3_009777-T1|Name=KJC3_009777-T1|organism=Aspergillus niger KJC3|type=CDS|length=1854bp|location=Sequence derived from alignment at ch7:1489699..1492199- (Aspergillus niger KJC3)
ATGGCTTCCACACAACCGGCTGGGTCCTCTGCACCCTCGTCTAACCTGAA
CTCTCCGATCTTGCCTCCTGGAGGAACACCATTCTTCACCGGTTCCTTTC
CCGATTCTAATGCGAGATCTTCTCCCATACCTACTAGTAACGCCCCTGCG
CAAGCTGATGGATCGAAATCGAAACGCACCAAACGTGATAGCCGCAAAAA
GCGTGAGGCCAAGGGTCTGGATCAGGAAAGCATGCCACCGAAGAAGCGAG
CAGTTGCTGTCCAAAACACTGCACTTCCCAGCTCGGATCTCAGCATACTA
AGGCCTCTCCTGTTGGCAGAGCCTCGCTCATCCGATCTGTTACCCCCACA
ACCCCGGCAGCTGAACTTTGTCAACCGAAAAACATCAGACGTTATCGGTC
AGAGCTGGGACTTTTTTGAGATTGTCGATAAGCTCACCAATAAGAATGGG
TTTCGTTATAGCTACGCCATAGCTGATCCAAGCTTTCCGCATATCAAATA
CCGTCAGACTGATGTCCAGCCCTATCACGCCCGATTTAGTTTCGAAGACT
CTCCAGCTGCCATACTCTTCAGTAAGGACGCTCTCGCAGTTACTTCTAAT
GAGCCTTGGCATACGGCACGAGCCAATGTCTGCGCGCGCGAGGGATCCTA
TTACTACGAAGCGCGCATTATCAGTGGTGTTGTGAATAATTCGCCTGCTC
CCTCTTCTAATAGCAATGGAGGCTTACCGTCCAGGGGGCATGTGCGTCTT
GGTTTTGCACGAAGGGAGGGAGACCTCGATGCCAACGTTGGTGTTGACTG
TTATGGCTACGGTATCCGTGATGTGAATGGTGAGGTCGTCAATCGGATGC
GGTGTGAATACTTTTTTCCAAAAGGCGAATCTATTCGTGAGGGCGACGTT
GTCGGCCTTCTAATCACCCTTCCGCCACTCTCTCTCCACAAGAAAGTTGT
AGAGGGAACTTATGAGTCAAGTGCAGATGGCGAGGTCTCATCACCAAGCT
CAGAAGCCCCGTCAGTCACGAATATAGTTCGTGACCGCATTCCTTTCCAC
TACAAATCAGACTTTTGTTGGCAACAGTCGAACGTGTTTCCAACAAAACA
GCTACGCGACTACGCATTCAATCTCAAAGAAACCCCTACGTTTGGGCCTC
CATCTCCGTTCAATGCCGAGGATGCATCTTTGCGAACGTTACCCGGTTCA
AGCATCACAATATTCAAGAACGGTGTAAAGATGGGCACTCCTTTTGAAGA
ACTGTATGCTTTCTTACCACCGGCCAGCCGACTCGCCAATGGCACAAACA
ACTTGGGCATCGGCGAGCGCGAGAATGCAGATGACGGAATGATCGGTTAT
TATCCTGCTGTCAGCTGCTACGGCGGAGGGGCGGTTGAATGCCGCTTTGA
CGGGCCATGGTGGGTGGGGCCACCATCTCATACGGACAACGGCGAGCCAG
TCCGGGGCATCGGCGAACGCTTCAACGAACAAATAGTTGAGGATATAGTT
GCCGATATCGTGGACGAGGTTGAGGCAATGTGCGTCTGGGGCGGAGTAGA
CGGCAACGTTGTCAACAATGCAAAGATCGATGGCTCTGGAACTGGGGCAG
TTGGTGGCTCCGAGGTGTTGAAAGGTGGTGTTAGTGCGGCTTATGAGTCT
GCTATTCCTCCAGTTGCGGACGGCCAGAGTGAGTCTGCTGCTAATCCCGC
TGGCAATGGCAACGAAGCGGGAAGCGTCATGGACCTAGATCCAGGCCAGG
CCGCGCTTGAGGACGCCACGCGCGCCGATGCCCCGGTTCCAGAAGCACCC
CAGAATACGATTCCCGACACGTCAACTGGGGATGGCGATGTTGAAATGTC
TTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262X7T |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR001870 |
| DBxref | InterPro:IPR003877 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1489699..1492199 - |
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