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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1526913..1528946+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009793-T1 ID=KJC3_009793-T1|Name=KJC3_009793-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2034bp|location=Sequence derived from alignment at ch7:1526913..1528946+ (Aspergillus niger KJC3)
CTCACCTCTTCTTCACTTATCCATCACATTTCACACCTCCACAGCCTCGG
CCTCAGGACATTGTTCCTCGACACCATCAGCAATAACACTTCTCCAGAAG
TCATGGATCTCAGAGTCACCCTCGTCAAGGGCATCGCATCCGGCATCGGT
CTAGCTTCGGAGAGCATATCGGCCTATAAAGCCAGCAGAGAAGAGAAAAA
GGCGCAAGCAGCAGACTCGGACAATGCGGTCAGAGAAGCGACTACGGAGG
ACACCGGAGTCGAACATCTTATCAATGAACAGCACGAGGAGGAATGGGTT
CTTGACGAGGCACAAGATGAACTAGCTGGGGATGAACATCGCGCTTATTC
AGAGCCTGCCAGCGGTGATATCGAGGGTCTAGCAGTTTCGTTCCTCCAAA
ATTATCCCGCTCCACCTCCTTACGCACCCTCGCCGGGCTCGCCCAGACTG
TCTTGTCCTGTGGTGCTGTCTCAGCGACGGCCAAAGTCTCGCAAGAGAGG
CTTTATTCGAGCCTATGCTCCCGTCCTGGAGGACTTTGGTATCGACAAGA
CCATGTTTCTTGAGTTTTTGGAGACATCGAACCGAGCGTGTCAGGCGACT
CCGTGGTTGCAGGCTATCAATCTGGCATCTATTGGTACTATGTTCATTCC
TGAGGCTATTTCAATAGCTGTTTCTATTCTGATACAATTGGCGACTGATG
TGGCGATGGCTGTTGATGGTAGGAGAAGGTAGGGCTTGCGTGGTATGGTG
TGGTGTTGCTTGTGTGATGCTGATGCATAGTCTATAGGACGAACAAATTC
TTTGACAAGATCAATGACGAATTTTTCCGCCCCCGTGGTCTCTTCTGTTT
GGTTATGACATGGAAACCAGGGTCTGACTCACCCTATGCTACCTTCGATA
TGAACTCCACGATCTCCGCGGCCATCGAGCATGGTGGAGCAGGACTAATG
AACAGGGTCCGACATAAACTCAAGTCATCGGATGCTAAGACGCACGGCAC
TTTGCCCTTCTCGGAGTGTGCACCTCTTATCTTTCCCGACCTTGACGAGC
TAGCAGAACACCGGGGAGACAACCAGTCGAAACTCAAGGGTGCGAAAAGA
AGAAAGGAGTTCGTCTCGGATTACTGGGACCGAAGGTCACAAGCCAAGTT
CGTATGTTATCGAGACCACACTAATGGTGGAGGATTGGTACTGACCAGGA
TATTGTAGATGATGAAGAATCCAGATAGCGCTTTGAGCCAGGGTCACAAG
CCAACATTCACCTCCCGTTATGCCGACCCTAGCCACCCTGCGAGCAGCGG
CTCCTTGGTCGGTCTACTCACGGGTGGATATATGACTGGTGAGAGGTTGG
TGCAACTTCGAAGCGGCATAAGTGGAACCGATGGTAGAAGAGGTCTCAGC
AGGCAGTCGATTGAAACGCCACCATTGTCCCTTGGTGGACTGGCGGCTGG
TATTCGTGCAGCCAGGTTTGGTCGATCGCCGGCAGAAGATCCGCAAGGGC
GAAGTGTGATGCAAGGCGAAGAGGGCTATCCACAGCCAGTTACTGAAGCT
TCGACTGGTGGCCAAAGCGTTCCCGGTCGTGGGCGGGAAATCAGAGACCT
TCGCCAGGCAGGATCTATAGTAAGTCCAATTGGAGGAATCAAAAAACTTC
TGAAGGAGGTACGTATGAACCCTTTTCCGGCAGCTTGCAGATGCTAAGAT
AATAATGACAGAATATTATATATCTCATGATTGTCAATATGCCTTCGGAG
GAAGATATGGAAGAAGCTCGGCGGATTCTCCAGTCACGATCACTGTTTTG
AATCTATGTTGTTCGGTCGCTTTATCTTTAGCGGGCCTTGTATTTTGCTT
GCTTTCTTGATCTGTTCTTGTAGTTTTAGCGAGACTAAAATATTAGCAAG
GGCGTGCAGAGTAAGTTAAAATGTTTATGGAACGAGTACCTGTATGGTTT
CTGTTGCCAGCAGGCAGTCAAGGGATGATATTCGAATGGTTCCTGGAATG
CCCGGCTTTTGGCTCATGGCACAGAATGGCGGGG back to topCoding sequence (CDS) from alignment at ch7:1526913..1528946+ >KJC3_009793-T1 ID=KJC3_009793-T1|Name=KJC3_009793-T1|organism=Aspergillus niger KJC3|type=CDS|length=6120bp|location=Sequence derived from alignment at ch7:1526913..1528946+ (Aspergillus niger KJC3)
ATGGATCTCAGAGTCACCCTCGTCAAGGGCATCGCATCCGGCATCGGTCT
AGCTTCGGAGAGCATATCGGCCTATAAAGCCAGCAGAGAAGAGAAAAAGG
CGCAAGCAGCAGACTCGGACAATGCGGTCAGAGAAGCGACTACGGAGGAC
ACCGGAGTCGAACATCTTATCAATGAACAGCACGAGGAGGAATGGGTTCT
TGACGAGGCACAAGATGAACTAGCTGGGGATGAACATCGCGCTTATTCAG
AGCCTGCCAGCGGTGATATCGAGGGTCTAGCAGTTTCGTTCCTCCAAAAT
TATCCCGCTCCACCTCCTTACGCACCCTCGCCGGGCTCGCCCAGACTGTC
TTGTCCTGTGGTGCTGTCTCAGCGACGGCCAAAGTCTCGCAAGAGAGGCT
TTATTCGAGCCTATGCTCCCGTCCTGGAGGACTTTGGTATCGACAAGACC
ATGTTTCTTGAGTTTTTGGAGACATCGAACCGAGCGTGTCAGGCGACTCC
GTGGTTGCAGGCTATCAATCTGGCATCTATTGGTACTATGTTCATTCCTG
AGGCTATTTCAATAGCTGTTTCTATTCTGATACAATTGGCGACTGATGTG
GCGATGGCTGTTGATGGTAGGAGAAGGACGAACAAATTCTTTGACAAGAT
CAATGACGAATTTTTCCGCCCCCGTGGTCTCTTCTGTTTGGTTATGACAT
GGAAACCAGGGTCTGACTCACCCTATGCTACCTTCGATATGAACTCCACG
ATCTCCGCGGCCATCGAGCATGGTGGAGCAGGACTAATGAACAGGGTCCG
ACATAAACTCAAGTCATCGGATGCTAAGACGCACGGCACTTTGCCCTTCT
CGGAGTGTGCACCTCTTATCTTTCCCGACCTTGACGAGCTAGCAGAACAC
CGGGGAGACAACCAGTCGAAACTCAAGGGTGCGAAAAGAAGAAAGGAGTT
CGTCTCGGATTACTGGGACCGAAGGTCACAAGCCAAGTTCATGATGAAGA
ATCCAGATAGCGCTTTGAGCCAGGGTCACAAGCCAACATTCACCTCCCGT
TATGCCGACCCTAGCCACCCTGCGAGCAGCGGCTCCTTGGTCGGTCTACT
CACGGGTGGATATATGACTGGTGAGAGGTTGGTGCAACTTCGAAGCGGCA
TAAGTGGAACCGATGGTAGAAGAGGTCTCAGCAGGCAGTCGATTGAAACG
CCACCATTGTCCCTTGGTGGACTGGCGGCTGGTATTCGTGCAGCCAGGTT
TGGTCGATCGCCGGCAGAAGATCCGCAAGGGCGAAGTGTGATGCAAGGCG
AAGAGGGCTATCCACAGCCAGTTACTGAAGCTTCGACTGGTGGCCAAAGC
GTTCCCGGTCGTGGGCGGGAAATCAGAGACCTTCGCCAGGCAGGATCTAT
AGTAAGTCCAATTGGAGGAATCAAAAAACTTCTGAAGGAGAATATTATAT
ATCTCATGATTGTCAATATGCCTTCGGAGGAAGATATGGAAGAAGCTCGG
CGGATTCTCCAGTCACGATCACTGTTTTGAATGGATCTCAGAGTCACCCT
CGTCAAGGGCATCGCATCCGGCATCGGTCTAGCTTCGGAGAGCATATCGG
CCTATAAAGCCAGCAGAGAAGAGAAAAAGGCGCAAGCAGCAGACTCGGAC
AATGCGGTCAGAGAAGCGACTACGGAGGACACCGGAGTCGAACATCTTAT
CAATGAACAGCACGAGGAGGAATGGGTTCTTGACGAGGCACAAGATGAAC
TAGCTGGGGATGAACATCGCGCTTATTCAGAGCCTGCCAGCGGTGATATC
GAGGGTCTAGCAGTTTCGTTCCTCCAAAATTATCCCGCTCCACCTCCTTA
CGCACCCTCGCCGGGCTCGCCCAGACTGTCTTGTCCTGTGGTGCTGTCTC
AGCGACGGCCAAAGTCTCGCAAGAGAGGCTTTATTCGAGCCTATGCTCCC
GTCCTGGAGGACTTTGGTATCGACAAGACCATGTTTCTTGAGTTTTTGGA
GACATCGAACCGAGCGTGTCAGGCGACTCCGTGGTTGCAGGCTATCAATC
TGGCATCTATTGGTACTATGTTCATTCCTGAGGCTATTTCAATAGCTGTT
TCTATTCTGATACAATTGGCGACTGATGTGGCGATGGCTGTTGATGGTAG
GAGAAGGACGAACAAATTCTTTGACAAGATCAATGACGAATTTTTCCGCC
CCCGTGGTCTCTTCTGTTTGGTTATGACATGGAAACCAGGGTCTGACTCA
CCCTATGCTACCTTCGATATGAACTCCACGATCTCCGCGGCCATCGAGCA
TGGTGGAGCAGGACTAATGAACAGGGTCCGACATAAACTCAAGTCATCGG
ATGCTAAGACGCACGGCACTTTGCCCTTCTCGGAGTGTGCACCTCTTATC
TTTCCCGACCTTGACGAGCTAGCAGAACACCGGGGAGACAACCAGTCGAA
ACTCAAGGGTGCGAAAAGAAGAAAGGAGTTCGTCTCGGATTACTGGGACC
GAAGGTCACAAGCCAAGTTCATGATGAAGAATCCAGATAGCGCTTTGAGC
CAGGGTCACAAGCCAACATTCACCTCCCGTTATGCCGACCCTAGCCACCC
TGCGAGCAGCGGCTCCTTGGTCGGTCTACTCACGGGTGGATATATGACTG
GTGAGAGGTTGGTGCAACTTCGAAGCGGCATAAGTGGAACCGATGGTAGA
AGAGGTCTCAGCAGGCAGTCGATTGAAACGCCACCATTGTCCCTTGGTGG
ACTGGCGGCTGGTATTCGTGCAGCCAGGTTTGGTCGATCGCCGGCAGAAG
ATCCGCAAGGGCGAAGTGTGATGCAAGGCGAAGAGGGCTATCCACAGCCA
GTTACTGAAGCTTCGACTGGTGGCCAAAGCGTTCCCGGTCGTGGGCGGGA
AATCAGAGACCTTCGCCAGGCAGGATCTATAGTAAGTCCAATTGGAGGAA
TCAAAAAACTTCTGAAGGAGAATATTATATATCTCATGATTGTCAATATG
CCTTCGGAGGAAGATATGGAAGAAGCTCGGCGGATTCTCCAGTCACGATC
ACTGTTTTGAATGGATCTCAGAGTCACCCTCGTCAAGGGCATCGCATCCG
GCATCGGTCTAGCTTCGGAGAGCATATCGGCCTATAAAGCCAGCAGAGAA
GAGAAAAAGGCGCAAGCAGCAGACTCGGACAATGCGGTCAGAGAAGCGAC
TACGGAGGACACCGGAGTCGAACATCTTATCAATGAACAGCACGAGGAGG
AATGGGTTCTTGACGAGGCACAAGATGAACTAGCTGGGGATGAACATCGC
GCTTATTCAGAGCCTGCCAGCGGTGATATCGAGGGTCTAGCAGTTTCGTT
CCTCCAAAATTATCCCGCTCCACCTCCTTACGCACCCTCGCCGGGCTCGC
CCAGACTGTCTTGTCCTGTGGTGCTGTCTCAGCGACGGCCAAAGTCTCGC
AAGAGAGGCTTTATTCGAGCCTATGCTCCCGTCCTGGAGGACTTTGGTAT
CGACAAGACCATGTTTCTTGAGTTTTTGGAGACATCGAACCGAGCGTGTC
AGGCGACTCCGTGGTTGCAGGCTATCAATCTGGCATCTATTGGTACTATG
TTCATTCCTGAGGCTATTTCAATAGCTGTTTCTATTCTGATACAATTGGC
GACTGATGTGGCGATGGCTGTTGATGGTAGGAGAAGGACGAACAAATTCT
TTGACAAGATCAATGACGAATTTTTCCGCCCCCGTGGTCTCTTCTGTTTG
GTTATGACATGGAAACCAGGGTCTGACTCACCCTATGCTACCTTCGATAT
GAACTCCACGATCTCCGCGGCCATCGAGCATGGTGGAGCAGGACTAATGA
ACAGGGTCCGACATAAACTCAAGTCATCGGATGCTAAGACGCACGGCACT
TTGCCCTTCTCGGAGTGTGCACCTCTTATCTTTCCCGACCTTGACGAGCT
AGCAGAACACCGGGGAGACAACCAGTCGAAACTCAAGGGTGCGAAAAGAA
GAAAGGAGTTCGTCTCGGATTACTGGGACCGAAGGTCACAAGCCAAGTTC
ATGATGAAGAATCCAGATAGCGCTTTGAGCCAGGGTCACAAGCCAACATT
CACCTCCCGTTATGCCGACCCTAGCCACCCTGCGAGCAGCGGCTCCTTGG
TCGGTCTACTCACGGGTGGATATATGACTGGTGAGAGGTTGGTGCAACTT
CGAAGCGGCATAAGTGGAACCGATGGTAGAAGAGGTCTCAGCAGGCAGTC
GATTGAAACGCCACCATTGTCCCTTGGTGGACTGGCGGCTGGTATTCGTG
CAGCCAGGTTTGGTCGATCGCCGGCAGAAGATCCGCAAGGGCGAAGTGTG
ATGCAAGGCGAAGAGGGCTATCCACAGCCAGTTACTGAAGCTTCGACTGG
TGGCCAAAGCGTTCCCGGTCGTGGGCGGGAAATCAGAGACCTTCGCCAGG
CAGGATCTATAGTAAGTCCAATTGGAGGAATCAAAAAACTTCTGAAGGAG
AATATTATATATCTCATGATTGTCAATATGCCTTCGGAGGAAGATATGGA
AGAAGCTCGGCGGATTCTCCAGTCACGATCACTGTTTTGAATGGATCTCA
GAGTCACCCTCGTCAAGGGCATCGCATCCGGCATCGGTCTAGCTTCGGAG
AGCATATCGGCCTATAAAGCCAGCAGAGAAGAGAAAAAGGCGCAAGCAGC
AGACTCGGACAATGCGGTCAGAGAAGCGACTACGGAGGACACCGGAGTCG
AACATCTTATCAATGAACAGCACGAGGAGGAATGGGTTCTTGACGAGGCA
CAAGATGAACTAGCTGGGGATGAACATCGCGCTTATTCAGAGCCTGCCAG
CGGTGATATCGAGGGTCTAGCAGTTTCGTTCCTCCAAAATTATCCCGCTC
CACCTCCTTACGCACCCTCGCCGGGCTCGCCCAGACTGTCTTGTCCTGTG
GTGCTGTCTCAGCGACGGCCAAAGTCTCGCAAGAGAGGCTTTATTCGAGC
CTATGCTCCCGTCCTGGAGGACTTTGGTATCGACAAGACCATGTTTCTTG
AGTTTTTGGAGACATCGAACCGAGCGTGTCAGGCGACTCCGTGGTTGCAG
GCTATCAATCTGGCATCTATTGGTACTATGTTCATTCCTGAGGCTATTTC
AATAGCTGTTTCTATTCTGATACAATTGGCGACTGATGTGGCGATGGCTG
TTGATGGTAGGAGAAGGACGAACAAATTCTTTGACAAGATCAATGACGAA
TTTTTCCGCCCCCGTGGTCTCTTCTGTTTGGTTATGACATGGAAACCAGG
GTCTGACTCACCCTATGCTACCTTCGATATGAACTCCACGATCTCCGCGG
CCATCGAGCATGGTGGAGCAGGACTAATGAACAGGGTCCGACATAAACTC
AAGTCATCGGATGCTAAGACGCACGGCACTTTGCCCTTCTCGGAGTGTGC
ACCTCTTATCTTTCCCGACCTTGACGAGCTAGCAGAACACCGGGGAGACA
ACCAGTCGAAACTCAAGGGTGCGAAAAGAAGAAAGGAGTTCGTCTCGGAT
TACTGGGACCGAAGGTCACAAGCCAAGTTCATGATGAAGAATCCAGATAG
CGCTTTGAGCCAGGGTCACAAGCCAACATTCACCTCCCGTTATGCCGACC
CTAGCCACCCTGCGAGCAGCGGCTCCTTGGTCGGTCTACTCACGGGTGGA
TATATGACTGGTGAGAGGTTGGTGCAACTTCGAAGCGGCATAAGTGGAAC
CGATGGTAGAAGAGGTCTCAGCAGGCAGTCGATTGAAACGCCACCATTGT
CCCTTGGTGGACTGGCGGCTGGTATTCGTGCAGCCAGGTTTGGTCGATCG
CCGGCAGAAGATCCGCAAGGGCGAAGTGTGATGCAAGGCGAAGAGGGCTA
TCCACAGCCAGTTACTGAAGCTTCGACTGGTGGCCAAAGCGTTCCCGGTC
GTGGGCGGGAAATCAGAGACCTTCGCCAGGCAGGATCTATAGTAAGTCCA
ATTGGAGGAATCAAAAAACTTCTGAAGGAGAATATTATATATCTCATGAT
TGTCAATATGCCTTCGGAGGAAGATATGGAAGAAGCTCGGCGGATTCTCC
AGTCACGATCACTGTTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009793-T1.utr5p1 | KJC3_009793-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009793-T1.utr3p1 | KJC3_009793-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1526913..1528946 + |
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