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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1555931..1557009+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009807-T1 ID=KJC3_009807-T1|Name=KJC3_009807-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1079bp|location=Sequence derived from alignment at ch7:1555931..1557009+ (Aspergillus niger KJC3)
ATGCAAGCCACATTTGCGGACAGTCCATCGATAACGGAAACACTCCCGCG
CCAGCGGAAGCCTTCTCTTCCCCCGGGAGCCTTCGCAGAAGAACCAGCAA
CTCCCGAGAAAGTTCTCTTCAATGATGGTGCCCCCATCCTTGTCTCTTAT
GACGAAATCCCCGAATGGTATCAAGACAATGAGTTTATTCGACATGGCTA
TCGACCCGTCTCTAATTCCACTCATGCATGCTTTGCCAGTTGGCTGTATC
TGCACAATGAAACCGTGAACATCTATTCGCATCTTGTTCCCGCCGTCTTC
TTCCTCGCAGCAGAAGGCATGTTTTATCAGTATCTTCAAGTCAAATATCC
CGAAGCCACGTTATCCGACCACGCAATTTTTGCCTTCTTCCTCCTGACTG
CTGTTATATGCTTGGGTCTGTCAACTACCTATCACACACTAATGAATCAC
TCCCTCCAAGTCTCTGAGCTATGGTTACGACTCGACTTTGTTGGTATTAT
CGTCCTGACCCTAGGAGATTTTGTCTCGGGAATTTATATGGTATTCTACT
GTGAGCCTCTGTTGAGACGATTATACTGGGGCATGGTATGGTCGATCACT
CCAGTGCTTTGTACACAAAGCTAATGGATTTTGGAAGATCATCTCACTGA
GTTGCATTACAATAATGATCCTCGTGAACCCCAAATTTAAAGGACCCCGT
TGGCGCACCTTCCGTGTCTGCACTTTCGTCGGCACTGGACTATCTGGCTT
CGCGCCTCTGATTCACGGTATCAGCGTCTTTGGTTTTGCTAAAATGATGG
TGCAGTCTGACATGCCATACTACCTCGGCGAAGGAGGGCTTCTTATTCTA
GGTGCACTTTTTTATACTGTTAGTACCCTGACACAGAAGCAAGATACCAT
ACTAATGATTGATCTAGATGCGCATTCCGGAATCAATCAAGCCCGGGAGG
TTTGACATATTCGGCTGCTCTCATCAGGTATTTCATGTTCTGGTCGTCCT
CACCACAGTTGTTCAGTTGATTGGTATCCTTTCGGCGTTTGACTATAACT
ACAACCATGGAAAATGCAGACTGCCATGA back to topCoding sequence (CDS) from alignment at ch7:1555931..1557009+ >KJC3_009807-T1 ID=KJC3_009807-T1|Name=KJC3_009807-T1|organism=Aspergillus niger KJC3|type=CDS|length=2934bp|location=Sequence derived from alignment at ch7:1555931..1557009+ (Aspergillus niger KJC3)
ATGCAAGCCACATTTGCGGACAGTCCATCGATAACGGAAACACTCCCGCG
CCAGCGGAAGCCTTCTCTTCCCCCGGGAGCCTTCGCAGAAGAACCAGCAA
CTCCCGAGAAAGTTCTCTTCAATGATGGTGCCCCCATCCTTGTCTCTTAT
GACGAAATCCCCGAATGGTATCAAGACAATGAGTTTATTCGACATGGCTA
TCGACCCGTCTCTAATTCCACTCATGCATGCTTTGCCAGTTGGCTGTATC
TGCACAATGAAACCGTGAACATCTATTCGCATCTTGTTCCCGCCGTCTTC
TTCCTCGCAGCAGAAGGCATGTTTTATCAGTATCTTCAAGTCAAATATCC
CGAAGCCACGTTATCCGACCACGCAATTTTTGCCTTCTTCCTCCTGACTG
CTGTTATATGCTTGGGTCTGTCAACTACCTATCACACACTAATGAATCAC
TCCCTCCAAGTCTCTGAGCTATGGTTACGACTCGACTTTGTTGGTATTAT
CGTCCTGACCCTAGGAGATTTTGTCTCGGGAATTTATATGGTATTCTACT
GTGAGCCTCTGTTGAGACGATTATACTGGGGCATGATCATCTCACTGAGT
TGCATTACAATAATGATCCTCGTGAACCCCAAATTTAAAGGACCCCGTTG
GCGCACCTTCCGTGTCTGCACTTTCGTCGGCACTGGACTATCTGGCTTCG
CGCCTCTGATTCACGGTATCAGCGTCTTTGGTTTTGCTAAAATGATGGTG
CAGTCTGACATGCCATACTACCTCGGCGAAGGAGGGCTTCTTATTCTAGG
TGCACTTTTTTATACTATGCGCATTCCGGAATCAATCAAGCCCGGGAGGT
TTGACATATTCGGCTGCTCTCATCAGGTATTTCATGTTCTGGTCGTCCTC
ACCACAGTTGTTCAGTTGATTGGTATCCTTTCGGCGTTTGACTATAACTA
CAACCATGGAAAATGCAGACTGCCATGAATGCAAGCCACATTTGCGGACA
GTCCATCGATAACGGAAACACTCCCGCGCCAGCGGAAGCCTTCTCTTCCC
CCGGGAGCCTTCGCAGAAGAACCAGCAACTCCCGAGAAAGTTCTCTTCAA
TGATGGTGCCCCCATCCTTGTCTCTTATGACGAAATCCCCGAATGGTATC
AAGACAATGAGTTTATTCGACATGGCTATCGACCCGTCTCTAATTCCACT
CATGCATGCTTTGCCAGTTGGCTGTATCTGCACAATGAAACCGTGAACAT
CTATTCGCATCTTGTTCCCGCCGTCTTCTTCCTCGCAGCAGAAGGCATGT
TTTATCAGTATCTTCAAGTCAAATATCCCGAAGCCACGTTATCCGACCAC
GCAATTTTTGCCTTCTTCCTCCTGACTGCTGTTATATGCTTGGGTCTGTC
AACTACCTATCACACACTAATGAATCACTCCCTCCAAGTCTCTGAGCTAT
GGTTACGACTCGACTTTGTTGGTATTATCGTCCTGACCCTAGGAGATTTT
GTCTCGGGAATTTATATGGTATTCTACTGTGAGCCTCTGTTGAGACGATT
ATACTGGGGCATGATCATCTCACTGAGTTGCATTACAATAATGATCCTCG
TGAACCCCAAATTTAAAGGACCCCGTTGGCGCACCTTCCGTGTCTGCACT
TTCGTCGGCACTGGACTATCTGGCTTCGCGCCTCTGATTCACGGTATCAG
CGTCTTTGGTTTTGCTAAAATGATGGTGCAGTCTGACATGCCATACTACC
TCGGCGAAGGAGGGCTTCTTATTCTAGGTGCACTTTTTTATACTATGCGC
ATTCCGGAATCAATCAAGCCCGGGAGGTTTGACATATTCGGCTGCTCTCA
TCAGGTATTTCATGTTCTGGTCGTCCTCACCACAGTTGTTCAGTTGATTG
GTATCCTTTCGGCGTTTGACTATAACTACAACCATGGAAAATGCAGACTG
CCATGAATGCAAGCCACATTTGCGGACAGTCCATCGATAACGGAAACACT
CCCGCGCCAGCGGAAGCCTTCTCTTCCCCCGGGAGCCTTCGCAGAAGAAC
CAGCAACTCCCGAGAAAGTTCTCTTCAATGATGGTGCCCCCATCCTTGTC
TCTTATGACGAAATCCCCGAATGGTATCAAGACAATGAGTTTATTCGACA
TGGCTATCGACCCGTCTCTAATTCCACTCATGCATGCTTTGCCAGTTGGC
TGTATCTGCACAATGAAACCGTGAACATCTATTCGCATCTTGTTCCCGCC
GTCTTCTTCCTCGCAGCAGAAGGCATGTTTTATCAGTATCTTCAAGTCAA
ATATCCCGAAGCCACGTTATCCGACCACGCAATTTTTGCCTTCTTCCTCC
TGACTGCTGTTATATGCTTGGGTCTGTCAACTACCTATCACACACTAATG
AATCACTCCCTCCAAGTCTCTGAGCTATGGTTACGACTCGACTTTGTTGG
TATTATCGTCCTGACCCTAGGAGATTTTGTCTCGGGAATTTATATGGTAT
TCTACTGTGAGCCTCTGTTGAGACGATTATACTGGGGCATGATCATCTCA
CTGAGTTGCATTACAATAATGATCCTCGTGAACCCCAAATTTAAAGGACC
CCGTTGGCGCACCTTCCGTGTCTGCACTTTCGTCGGCACTGGACTATCTG
GCTTCGCGCCTCTGATTCACGGTATCAGCGTCTTTGGTTTTGCTAAAATG
ATGGTGCAGTCTGACATGCCATACTACCTCGGCGAAGGAGGGCTTCTTAT
TCTAGGTGCACTTTTTTATACTATGCGCATTCCGGAATCAATCAAGCCCG
GGAGGTTTGACATATTCGGCTGCTCTCATCAGGTATTTCATGTTCTGGTC
GTCCTCACCACAGTTGTTCAGTTGATTGGTATCCTTTCGGCGTTTGACTA
TAACTACAACCATGGAAAATGCAGACTGCCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004254 |
| DBxref | PFAM:PF03006 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1555931..1557009 + |
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