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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1607763..1608689+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009829-T1 ID=KJC3_009829-T1|Name=KJC3_009829-T1|organism=Aspergillus niger KJC3|type=mRNA|length=927bp|location=Sequence derived from alignment at ch7:1607763..1608689+ (Aspergillus niger KJC3)
GAACAATAAGTAATTGAACCTGATCATATCGGAACTTTCCCATAAAGTAC
CCCCAACATTCAATATCCTTTATCAACCCTCACAAAATGACCATCCCTCA
CTACGGCGTCTGGATCGCCCAACCAACCCGCTACACCGCCCAAACCGAAG
AAGAAGATCCCAAGTCCCCTCACATCTACCTCTACTTCAAAGACGATTCC
TCCTCCAGCAAGGACTACGAAGCCGCCATCAACGTCAAATCCACCGGCAA
AGACTCTCGTCTCGTATACTGGTTCGACCGGAGCTTCAGCCACCCGATCA
CCGAGCAGCTATCTAATCTCGATGAGGGCTTCCACCTCCTCAAATCTTAT
TCCCACCGCAGTCGTCGACACCAAGAATCCTCCTCCAAGCTGAAGGGTTT
GGACTTCATCCGCACAAAGGGTCTTGTGAATATCGAGTCGGGTGCGGTCC
TCTCTGAGGCCGACACCGGGCCGCACAATGCTGTGCTCGAGGCTTTGGAG
CCTATTCTCAATGATGCGATCAGTAAGAAAGCGACGGTGTATATCTTTGG
GTCGTCGTATGGGTCAGGGATTCATGATGTTCATATGAATCAGGGGAGTG
CGCCGTCATATGAGAATGGAATCTATGAGGATGGGGCATTGTTGTTTAGT
TTCGAGGATGGGCATTGGGAGGCGGTGTTTTTGGCATTTGCGTCGCAGGA
GATTCCAACGGATGATAAGGGGGAGCCTGAGGAGGGGAGTAAGTCGTTGG
CTAGTATTCTGGGTCAGTAGGTGTTTTGCTCAAGGTGTTGATTTGGGTGG
ATGATGAAATGTTATGATTTGGATGATTTGAGCGTAGTAGTATTGAGCAG
AATGTTACTGCGAGAGGCAGTAACATTCGGTACTAGGTTCATTGTCTAAG
ATACGATAGTGACGAATATATTTTACC back to topCoding sequence (CDS) from alignment at ch7:1607763..1608689+ >KJC3_009829-T1 ID=KJC3_009829-T1|Name=KJC3_009829-T1|organism=Aspergillus niger KJC3|type=CDS|length=684bp|location=Sequence derived from alignment at ch7:1607763..1608689+ (Aspergillus niger KJC3)
ATGACCATCCCTCACTACGGCGTCTGGATCGCCCAACCAACCCGCTACAC
CGCCCAAACCGAAGAAGAAGATCCCAAGTCCCCTCACATCTACCTCTACT
TCAAAGACGATTCCTCCTCCAGCAAGGACTACGAAGCCGCCATCAACGTC
AAATCCACCGGCAAAGACTCTCGTCTCGTATACTGGTTCGACCGGAGCTT
CAGCCACCCGATCACCGAGCAGCTATCTAATCTCGATGAGGGCTTCCACC
TCCTCAAATCTTATTCCCACCGCAGTCGTCGACACCAAGAATCCTCCTCC
AAGCTGAAGGGTTTGGACTTCATCCGCACAAAGGGTCTTGTGAATATCGA
GTCGGGTGCGGTCCTCTCTGAGGCCGACACCGGGCCGCACAATGCTGTGC
TCGAGGCTTTGGAGCCTATTCTCAATGATGCGATCAGTAAGAAAGCGACG
GTGTATATCTTTGGGTCGTCGTATGGGTCAGGGATTCATGATGTTCATAT
GAATCAGGGGAGTGCGCCGTCATATGAGAATGGAATCTATGAGGATGGGG
CATTGTTGTTTAGTTTCGAGGATGGGCATTGGGAGGCGGTGTTTTTGGCA
TTTGCGTCGCAGGAGATTCCAACGGATGATAAGGGGGAGCCTGAGGAGGG
GAGTAAGTCGTTGGCTAGTATTCTGGGTCAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009829-T1.utr5p1 | KJC3_009829-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009829-T1.utr3p1 | KJC3_009829-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019268 |
| DBxref | PFAM:PF10042 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1607763..1608689 + |
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