You are here

Home

KJC3_009866-T1, KJC3_009866-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009866-T1
Unique NameKJC3_009866-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1695094..1695979+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009866-T1 ID=KJC3_009866-T1|Name=KJC3_009866-T1|organism=Aspergillus niger KJC3|type=mRNA|length=886bp|location=Sequence derived from alignment at ch7:1695094..1695979+ (Aspergillus niger KJC3)
ATGGTTGTGCTTATTTCGATTGATTATATAGCTGATACTCGCAGATACGT
TTTGACCTTGGAAGATCGTGTAAGAGAGCTCCAAAGGAGCAACCAGCGCG
GGTCTCATCGAAGATCGGGCGGAGACATATACGCTGATCTAATTCGTCAG
TTACCCTGTTTGTGTAGACCATGACGTGCCTAAAATTGTTACTGGTACTT
ACGTTTCGATACATTCAGCTGGAAGAAGATTGGATCCCAACAGCTCCAGC
AATGTTGTAGATCATCTGGCCGTTTCTACACCTCCACCGTCAGACCGATA
TCTTGACACCCAGCTTTTGGCACAACAAGATGCATTGCCAACATCTCAGA
ACGACTTCATCTGCACTGATGCAACGGTAATCGTGCCGTCGCCAGAGACC
GACTCAGCGTCTGCTTCTGGAACTTCGTCAGTGATGGGTCTCGTTCAGTC
GATGATGCGAGCAGCCGGAACAAGCAATCAGAGCAACTATGCACCTCGGT
TGGATTTTGGCCACAATATGGAATCTTCGTCCGGATCAAAGCGTGTCCGA
AGGACGCCGGGGGATTCTCATGATGTGGATATAGACCTCCCTTCGTTACC
ACCACGACGCGTGGCCGACAACTTGATGAACTGCTTCTGGAATTCCACAC
ATCCAATATTTCCTATACTTCACAAGCCAACATTCGTCGCTTCTTATGAA
CTTTTGTGGGCGCCTCACGACGATCAAGCCTCATTGCCCGAATCTGGAGC
AACAGAGGACCCTATATTTCTGGCATCATTGAATGCTGTATTTGCCATCG
GCTGTCACTTTAGTGACATAGTGGCTCCCGCCAAAAGGGCAACTTTGGCG
GATCAATTCTACCAAAAATCTAGGAAGTTCTACTAA
back to top

Coding sequence (CDS) from alignment at ch7:1695094..1695979+

>KJC3_009866-T1 ID=KJC3_009866-T1|Name=KJC3_009866-T1|organism=Aspergillus niger KJC3|type=CDS|length=1626bp|location=Sequence derived from alignment at ch7:1695094..1695979+ (Aspergillus niger KJC3)
ATGGTTGTGCTTATTTCGATTGATTATATAGCTGATACTCGCAGATACGT
TTTGACCTTGGAAGATCGTGTAAGAGAGCTCCAAAGGAGCAACCAGCGCG
GGTCTCATCGAAGATCGGGCGGAGACATATACGCTGATCTAATTCCTGGA
AGAAGATTGGATCCCAACAGCTCCAGCAATGTTGTAGATCATCTGGCCGT
TTCTACACCTCCACCGTCAGACCGATATCTTGACACCCAGCTTTTGGCAC
AACAAGATGCATTGCCAACATCTCAGAACGACTTCATCTGCACTGATGCA
ACGGTAATCGTGCCGTCGCCAGAGACCGACTCAGCGTCTGCTTCTGGAAC
TTCGTCAGTGATGGGTCTCGTTCAGTCGATGATGCGAGCAGCCGGAACAA
GCAATCAGAGCAACTATGCACCTCGGTTGGATTTTGGCCACAATATGGAA
TCTTCGTCCGGATCAAAGCGTGTCCGAAGGACGCCGGGGGATTCTCATGA
TGTGGATATAGACCTCCCTTCGTTACCACCACGACGCGTGGCCGACAACT
TGATGAACTGCTTCTGGAATTCCACACATCCAATATTTCCTATACTTCAC
AAGCCAACATTCGTCGCTTCTTATGAACTTTTGTGGGCGCCTCACGACGA
TCAAGCCTCATTGCCCGAATCTGGAGCAACAGAGGACCCTATATTTCTGG
CATCATTGAATGCTGTATTTGCCATCGGCTGTCACTTTAGTGACATAGTG
GCTCCCGCCAAAAGGGCAACTTTGGCGGATCAATTCTACCAAAAATCTAG
GAAGTTCTACTAAATGGTTGTGCTTATTTCGATTGATTATATAGCTGATA
CTCGCAGATACGTTTTGACCTTGGAAGATCGTGTAAGAGAGCTCCAAAGG
AGCAACCAGCGCGGGTCTCATCGAAGATCGGGCGGAGACATATACGCTGA
TCTAATTCCTGGAAGAAGATTGGATCCCAACAGCTCCAGCAATGTTGTAG
ATCATCTGGCCGTTTCTACACCTCCACCGTCAGACCGATATCTTGACACC
CAGCTTTTGGCACAACAAGATGCATTGCCAACATCTCAGAACGACTTCAT
CTGCACTGATGCAACGGTAATCGTGCCGTCGCCAGAGACCGACTCAGCGT
CTGCTTCTGGAACTTCGTCAGTGATGGGTCTCGTTCAGTCGATGATGCGA
GCAGCCGGAACAAGCAATCAGAGCAACTATGCACCTCGGTTGGATTTTGG
CCACAATATGGAATCTTCGTCCGGATCAAAGCGTGTCCGAAGGACGCCGG
GGGATTCTCATGATGTGGATATAGACCTCCCTTCGTTACCACCACGACGC
GTGGCCGACAACTTGATGAACTGCTTCTGGAATTCCACACATCCAATATT
TCCTATACTTCACAAGCCAACATTCGTCGCTTCTTATGAACTTTTGTGGG
CGCCTCACGACGATCAAGCCTCATTGCCCGAATCTGGAGCAACAGAGGAC
CCTATATTTCTGGCATCATTGAATGCTGTATTTGCCATCGGCTGTCACTT
TAGTGACATAGTGGCTCCCGCCAAAAGGGCAACTTTGGCGGATCAATTCT
ACCAAAAATCTAGGAAGTTCTACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009866KJC3_009866Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009866-T1.exon1KJC3_009866-T1.exon1Aspergillus niger KJC3exon
KJC3_009866-T1.exon2KJC3_009866-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009866-T1.cdsKJC3_009866-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009866-T1KJC3_009866-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1695094..1695979 +
Powered by Drupal