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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1835130..1836043+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009916-T1 ID=KJC3_009916-T1|Name=KJC3_009916-T1|organism=Aspergillus niger KJC3|type=mRNA|length=914bp|location=Sequence derived from alignment at ch7:1835130..1836043+ (Aspergillus niger KJC3)
GAGCCACTAATATATTTACGCAGTGCAACTGGTGCGCCTTAATTCTTTAA
CAATGACTAGCCGCTATATTCTCAACTCTTCCCGCCCTATCCTTAGGCCT
CTACTATCTATCCCAAAACAACACCGCTTCATATCCCAATCCCCTATCAT
CATGGCACCTCGTATATCCGAAGCGATCAAGACCGATCACCGCGAGATCG
AGGACTACTACAACAAGATCCTGAACTCTGCTACCGAGAAAGAGAAAATC
GAATGGCAAAACCAATTTACTTGGGAATTAGCCCGTCATTCGATCGCCGA
GGAGCTGGTCGTCTACCCCCAGTTCGAGAAGTCCATCCCCGACGGCCGGG
CCATGGCAGATAAGGACCGGAAGGAGCATCAATCGGTAAGTCATCTATCA
TGCTTTCATTACCAATCCGTTACTAAAGCAACATGTAGGTTAAAGAACAG
CTGAAAAAATTCCAAAACATGAAACCCGCGGACCCGGAGTTCGAGTCTAC
TATCAGGGCGTTGATGAAGGACCTCTCCGAGCACATCAAGGAAGAAGAGA
GTCAAGATCTGCCGAAGCTGGAAGACGCCGTGTCGGCAGAGGAAAGCGAG
AAGCTTTCGAAGTCTTTTGGTAGGACGAAGATGTTTGTGCCCTCGCGGTC
CCATCCTAGTGCGCCTGATAAGCCGCCTTTTGAGACTGCCATCGGTTTGA
TGACTGCTCCGATTGATCATCTGGCTGATCTGTTTCGGAAATGGCCGCAT
ACTTCGGGGATGCCGAATCCTTCTACGAAGTAATGTATCTATCATTTTTT
CCTTATGTGTTATGGTTATGTAAATTAATGTCTTCGTTAGTTCTGGATTA
CGCTGGTTATAGTTTGGAGGATATGGCAAGAATGACACATACGCAAAAGT
GCATGTAATTTAAA back to topCoding sequence (CDS) from alignment at ch7:1835130..1836043+ >KJC3_009916-T1 ID=KJC3_009916-T1|Name=KJC3_009916-T1|organism=Aspergillus niger KJC3|type=CDS|length=1356bp|location=Sequence derived from alignment at ch7:1835130..1836043+ (Aspergillus niger KJC3)
ATGACTAGCCGCTATATTCTCAACTCTTCCCGCCCTATCCTTAGGCCTCT
ACTATCTATCCCAAAACAACACCGCTTCATATCCCAATCCCCTATCATCA
TGGCACCTCGTATATCCGAAGCGATCAAGACCGATCACCGCGAGATCGAG
GACTACTACAACAAGATCCTGAACTCTGCTACCGAGAAAGAGAAAATCGA
ATGGCAAAACCAATTTACTTGGGAATTAGCCCGTCATTCGATCGCCGAGG
AGCTGGTCGTCTACCCCCAGTTCGAGAAGTCCATCCCCGACGGCCGGGCC
ATGGCAGATAAGGACCGGAAGGAGCATCAATCGGTTAAAGAACAGCTGAA
AAAATTCCAAAACATGAAACCCGCGGACCCGGAGTTCGAGTCTACTATCA
GGGCGTTGATGAAGGACCTCTCCGAGCACATCAAGGAAGAAGAGAGTCAA
GATCTGCCGAAGCTGGAAGACGCCGTGTCGGCAGAGGAAAGCGAGAAGCT
TTCGAAGTCTTTTGGTAGGACGAAGATGTTTGTGCCCTCGCGGTCCCATC
CTAGTGCGCCTGATAAGCCGCCTTTTGAGACTGCCATCGGTTTGATGACT
GCTCCGATTGATCATCTGGCTGATCTGTTTCGGAAATGGCCGCATACTTC
GGGGATGCCGAATCCTTCTACGAAGTAAATGACTAGCCGCTATATTCTCA
ACTCTTCCCGCCCTATCCTTAGGCCTCTACTATCTATCCCAAAACAACAC
CGCTTCATATCCCAATCCCCTATCATCATGGCACCTCGTATATCCGAAGC
GATCAAGACCGATCACCGCGAGATCGAGGACTACTACAACAAGATCCTGA
ACTCTGCTACCGAGAAAGAGAAAATCGAATGGCAAAACCAATTTACTTGG
GAATTAGCCCGTCATTCGATCGCCGAGGAGCTGGTCGTCTACCCCCAGTT
CGAGAAGTCCATCCCCGACGGCCGGGCCATGGCAGATAAGGACCGGAAGG
AGCATCAATCGGTTAAAGAACAGCTGAAAAAATTCCAAAACATGAAACCC
GCGGACCCGGAGTTCGAGTCTACTATCAGGGCGTTGATGAAGGACCTCTC
CGAGCACATCAAGGAAGAAGAGAGTCAAGATCTGCCGAAGCTGGAAGACG
CCGTGTCGGCAGAGGAAAGCGAGAAGCTTTCGAAGTCTTTTGGTAGGACG
AAGATGTTTGTGCCCTCGCGGTCCCATCCTAGTGCGCCTGATAAGCCGCC
TTTTGAGACTGCCATCGGTTTGATGACTGCTCCGATTGATCATCTGGCTG
ATCTGTTTCGGAAATGGCCGCATACTTCGGGGATGCCGAATCCTTCTACG
AAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009916-T1.utr5p1 | KJC3_009916-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009916-T1.utr3p1 | KJC3_009916-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012312 |
| DBxref | PFAM:PF01814 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1835130..1836043 + |
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