|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1862180..1863505- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009929-T1 ID=KJC3_009929-T1|Name=KJC3_009929-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1326bp|location=Sequence derived from alignment at ch7:1862180..1863505- (Aspergillus niger KJC3)
ATGCAGATTCTAAAATTATGCCTTGCGGTAGCCACCGCTGCTCACGTCCA
CGGGTTGATTCAAGATGTACCCAGTCTAAACGGTACGAGCTAAACATTGA
GTTCTAACATCCACACTAACATGCTTATTTACTCTAGGGCCGGTAATGAT
GGTCCCTGACACACCCGGCTCAAAGAATAGAACGAATCAATTCCAGCATC
CAGGACTCTGGCATAGCCACTCTCAGCTCGAGCTTATGCGAAACAATGTT
CTCAAAGGCGTCGAGCCCTGGGCATCTGCATACACCCGTTTTGCCAAGGA
TCCCTACTCCAGTGCCTCTTATGAAATGCAGGGGCCGTATCCTGTGATTA
GTCGTGGGCAGATAAGCAACTATACCAGTTTTCATGACGACTCTCGCGCT
GCATACCAGAATGCTATAATGTGTAAGTCTCTAATCCAATTCCAGAGACT
ACTCCAGGACTAATACATCAGGAAAACATAGGGTACATAACCCGTAACGA
AAGCCACTGGAACCGCTCAACCACGATCCTCGACGCCTGGGGCTCCAACC
TCGAGAACATCATTGGCACAGACCGATCCCTTCTAATCGGAATCGAAGGC
TCCATTTTCGCCAACGCAGCCGAGATCATGCGCTGGGAAGGCGGTTGGGT
AGAAGAAGGCGCAACATTCAAAGGCGGCTCCGGCCTGAGCGTCCAGCTTT
ATTGGCTGTTCGCTCGACAGAGCATCATCATCGGACAAGCAAACTACGGC
ATGGCTAGTATTATGGGTCTGCTCAACTTTGCCGTTTACCTTGACGACGT
GGCTCTGTACAATTATGCTCTGTATGCGTATAAGTATGATCGCTGTGCCG
GTTTCCCCTACAATTATCTGGCTTCCACGGGCCAGAACTCCGAAGCGGGT
CGCGATCAGACGCATGTGCAGGATGCATTGCAGTGGACGGCACTTGCTGC
GAGGGTCGTGGCTAATCAAGAATATGACTTGTTTGCTTTAGAGGATAAAC
TTATTTTCACGGCGGCGGAATATGCGGGTAAGTACCTCATGAATCAGACG
GTGCCTTATGACGCGAGCTTTTATCGGTGCGAGGTGGTTTTGGTGGATGG
TCCTTGGGCAAATATTTCAGCGATCAATCGGTATATTGGGTATCAGGATG
GGAAGACGAACCCGGCTGCTTGGGGGTTGATTTATTATGAGGCTTTGGAA
AGAGGGATTGAGGTTCCTTGGACTTCGCGCGTGAAAGATGTCTATGATGC
ATCTGTGAAGGGTCAGACCTCGCCGGTTGATCCGTTCAGTTGGGCGGACT
TGCTTTTCGCGGTTGCAGAGGAATAG back to topCoding sequence (CDS) from alignment at ch7:1862180..1863505- >KJC3_009929-T1 ID=KJC3_009929-T1|Name=KJC3_009929-T1|organism=Aspergillus niger KJC3|type=CDS|length=3636bp|location=Sequence derived from alignment at ch7:1862180..1863505- (Aspergillus niger KJC3)
GGTACATAACCCGTAACGAAAGCCACTGGAACCGCTCAACCACGATCCTC
GACGCCTGGGGCTCCAACCTCGAGAACATCATTGGCACAGACCGATCCCT
TCTAATCGGAATCGAAGGCTCCATTTTCGCCAACGCAGCCGAGATCATGC
GCTGGGAAGGCGGTTGGGTAGAAGAAGGCGCAACATTCAAAGGCGGCTCC
GGCCTGAGCGTCCAGCTTTATTGGCTGTTCGCTCGACAGAGCATCATCAT
CGGACAAGCAAACTACGGCATGGCTAGTATTATGGGTCTGCTCAACTTTG
CCGTTTACCTTGACGACGTGGCTCTGTACAATTATGCTCTGTATGCGTAT
AAGTATGATCGCTGTGCCGGTTTCCCCTACAATTATCTGGCTTCCACGGG
CCAGAACTCCGAAGCGGGTCGCGATCAGACGCATGTGCAGGATGCATTGC
AGTGGACGGCACTTGCTGCGAGGGTCGTGGCTAATCAAGAATATGACTTG
TTTGCTTTAGAGGATAAACTTATTTTCACGGCGGCGGAATATGCGGGTAA
GTACCTCATGAATCAGACGGTGCCTTATGACGCGAGCTTTTATCGGTGCG
AGGTGGTTTTGGTGGATGGTCCTTGGGCAAATATTTCAGCGATCAATCGG
TATATTGGGTATCAGGATGGGAAGACGAACCCGGCTGCTTGGGGGTTGAT
TTATTATGAGGCTTTGGAAAGAGGGATTGAGGTTCCTTGGACTTCGCGCG
TGAAAGATGTCTATGATGCATCTGTGAAGGGTCAGACCTCGCCGGTTGAT
CCGTTCAGTTGGGCGGACTTGCTTTTCGCGGTTGCAGAGGAATAGGGCCG
GTAATGATGGTCCCTGACACACCCGGCTCAAAGAATAGAACGAATCAATT
CCAGCATCCAGGACTCTGGCATAGCCACTCTCAGCTCGAGCTTATGCGAA
ACAATGTTCTCAAAGGCGTCGAGCCCTGGGCATCTGCATACACCCGTTTT
GCCAAGGATCCCTACTCCAGTGCCTCTTATGAAATGCAGGGGCCGTATCC
TGTGATTAGTCGTGGGCAGATAAGCAACTATACCAGTTTTCATGACGACT
CTCGCGCTGCATACCAGAATGCTATAATGTATGCAGATTCTAAAATTATG
CCTTGCGGTAGCCACCGCTGCTCACGTCCACGGGTTGATTCAAGATGTAC
CCAGTCTAAACGGGTACATAACCCGTAACGAAAGCCACTGGAACCGCTCA
ACCACGATCCTCGACGCCTGGGGCTCCAACCTCGAGAACATCATTGGCAC
AGACCGATCCCTTCTAATCGGAATCGAAGGCTCCATTTTCGCCAACGCAG
CCGAGATCATGCGCTGGGAAGGCGGTTGGGTAGAAGAAGGCGCAACATTC
AAAGGCGGCTCCGGCCTGAGCGTCCAGCTTTATTGGCTGTTCGCTCGACA
GAGCATCATCATCGGACAAGCAAACTACGGCATGGCTAGTATTATGGGTC
TGCTCAACTTTGCCGTTTACCTTGACGACGTGGCTCTGTACAATTATGCT
CTGTATGCGTATAAGTATGATCGCTGTGCCGGTTTCCCCTACAATTATCT
GGCTTCCACGGGCCAGAACTCCGAAGCGGGTCGCGATCAGACGCATGTGC
AGGATGCATTGCAGTGGACGGCACTTGCTGCGAGGGTCGTGGCTAATCAA
GAATATGACTTGTTTGCTTTAGAGGATAAACTTATTTTCACGGCGGCGGA
ATATGCGGGTAAGTACCTCATGAATCAGACGGTGCCTTATGACGCGAGCT
TTTATCGGTGCGAGGTGGTTTTGGTGGATGGTCCTTGGGCAAATATTTCA
GCGATCAATCGGTATATTGGGTATCAGGATGGGAAGACGAACCCGGCTGC
TTGGGGGTTGATTTATTATGAGGCTTTGGAAAGAGGGATTGAGGTTCCTT
GGACTTCGCGCGTGAAAGATGTCTATGATGCATCTGTGAAGGGTCAGACC
TCGCCGGTTGATCCGTTCAGTTGGGCGGACTTGCTTTTCGCGGTTGCAGA
GGAATAGGGCCGGTAATGATGGTCCCTGACACACCCGGCTCAAAGAATAG
AACGAATCAATTCCAGCATCCAGGACTCTGGCATAGCCACTCTCAGCTCG
AGCTTATGCGAAACAATGTTCTCAAAGGCGTCGAGCCCTGGGCATCTGCA
TACACCCGTTTTGCCAAGGATCCCTACTCCAGTGCCTCTTATGAAATGCA
GGGGCCGTATCCTGTGATTAGTCGTGGGCAGATAAGCAACTATACCAGTT
TTCATGACGACTCTCGCGCTGCATACCAGAATGCTATAATGTATGCAGAT
TCTAAAATTATGCCTTGCGGTAGCCACCGCTGCTCACGTCCACGGGTTGA
TTCAAGATGTACCCAGTCTAAACGGGTACATAACCCGTAACGAAAGCCAC
TGGAACCGCTCAACCACGATCCTCGACGCCTGGGGCTCCAACCTCGAGAA
CATCATTGGCACAGACCGATCCCTTCTAATCGGAATCGAAGGCTCCATTT
TCGCCAACGCAGCCGAGATCATGCGCTGGGAAGGCGGTTGGGTAGAAGAA
GGCGCAACATTCAAAGGCGGCTCCGGCCTGAGCGTCCAGCTTTATTGGCT
GTTCGCTCGACAGAGCATCATCATCGGACAAGCAAACTACGGCATGGCTA
GTATTATGGGTCTGCTCAACTTTGCCGTTTACCTTGACGACGTGGCTCTG
TACAATTATGCTCTGTATGCGTATAAGTATGATCGCTGTGCCGGTTTCCC
CTACAATTATCTGGCTTCCACGGGCCAGAACTCCGAAGCGGGTCGCGATC
AGACGCATGTGCAGGATGCATTGCAGTGGACGGCACTTGCTGCGAGGGTC
GTGGCTAATCAAGAATATGACTTGTTTGCTTTAGAGGATAAACTTATTTT
CACGGCGGCGGAATATGCGGGTAAGTACCTCATGAATCAGACGGTGCCTT
ATGACGCGAGCTTTTATCGGTGCGAGGTGGTTTTGGTGGATGGTCCTTGG
GCAAATATTTCAGCGATCAATCGGTATATTGGGTATCAGGATGGGAAGAC
GAACCCGGCTGCTTGGGGGTTGATTTATTATGAGGCTTTGGAAAGAGGGA
TTGAGGTTCCTTGGACTTCGCGCGTGAAAGATGTCTATGATGCATCTGTG
AAGGGTCAGACCTCGCCGGTTGATCCGTTCAGTTGGGCGGACTTGCTTTT
CGCGGTTGCAGAGGAATAGGGCCGGTAATGATGGTCCCTGACACACCCGG
CTCAAAGAATAGAACGAATCAATTCCAGCATCCAGGACTCTGGCATAGCC
ACTCTCAGCTCGAGCTTATGCGAAACAATGTTCTCAAAGGCGTCGAGCCC
TGGGCATCTGCATACACCCGTTTTGCCAAGGATCCCTACTCCAGTGCCTC
TTATGAAATGCAGGGGCCGTATCCTGTGATTAGTCGTGGGCAGATAAGCA
ACTATACCAGTTTTCATGACGACTCTCGCGCTGCATACCAGAATGCTATA
ATGTATGCAGATTCTAAAATTATGCCTTGCGGTAGCCACCGCTGCTCACG
TCCACGGGTTGATTCAAGATGTACCCAGTCTAAACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| DBxref | InterPro:IPR008929 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1862180..1863505 - |
|
