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KJC3_009933-T1, KJC3_009933-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009933-T1
Unique NameKJC3_009933-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1874747..1875407-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009933-T1 ID=KJC3_009933-T1|Name=KJC3_009933-T1|organism=Aspergillus niger KJC3|type=mRNA|length=661bp|location=Sequence derived from alignment at ch7:1874747..1875407- (Aspergillus niger KJC3)
AATCAATCTCCATTCTCATCCAACCCTCCTCACTCACCCCCCATACATCT
CCACACCATCCCATCCTCACCACCATGTCCCCAATCCCCAGCTACTCCCG
CCCCGGCCGCGGCCAACACTTCCAAGACGCCTACGGCTTCGCCGAAGCCT
GCATAGCCGGAGACCGAATGGAAATAGCCGGCCAGAGTGAGCCCCCATCC
CCTTTCCCTCCATTCCCCTCATCACCGACTAATCCAACCCCCCCTTCAAC
ATTCTAGCCGGCATGTCCCCGACATCAACCGAAGTCCCACCCACCCTCGA
AGAAGAAGTTGCGCAAGCATTCAACAACATCAACGAAGTTATCCTCTACA
CACTAGAGAAAGCCAAGCCCGATCTGCGCGCTAGCGTCAAGAGCGGCTGG
GACCGCGTCGTGAAGATCCGCACCTACCATGTCCAGTTGCCCCAGACCCG
AGAGAAGATTATTGGCCTGATGGTGGAGAATGTTAAGAAGTGGTGTCCGG
ATCACCAGCCTACTTGGACTATGTTGGGGATTGAGGCCTTGCCGTTTGAA
GGGCAGAATTTGGAGATTGAGGTGGATGTTTTCTTGGGGTGAAATGCTTT
ACTATTGAAGTATACGGCTTATGTGGGAGATATATGAAAATGTATAGCTT
GTAAAGAGAAG
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Coding sequence (CDS) from alignment at ch7:1874747..1875407-

>KJC3_009933-T1 ID=KJC3_009933-T1|Name=KJC3_009933-T1|organism=Aspergillus niger KJC3|type=CDS|length=894bp|location=Sequence derived from alignment at ch7:1874747..1875407- (Aspergillus niger KJC3)
CCGGCATGTCCCCGACATCAACCGAAGTCCCACCCACCCTCGAAGAAGAA
GTTGCGCAAGCATTCAACAACATCAACGAAGTTATCCTCTACACACTAGA
GAAAGCCAAGCCCGATCTGCGCGCTAGCGTCAAGAGCGGCTGGGACCGCG
TCGTGAAGATCCGCACCTACCATGTCCAGTTGCCCCAGACCCGAGAGAAG
ATTATTGGCCTGATGGTGGAGAATGTTAAGAAGTGGTGTCCGGATCACCA
GCCTACTTGGACTATGTTGGGGATTGAGGCCTTGCCGTTTGAAGGGCAGA
ATTTGGAGATTGAGGTGGATGTTTTCTTGGGGTGAATGTCCCCAATCCCC
AGCTACTCCCGCCCCGGCCGCGGCCAACACTTCCAAGACGCCTACGGCTT
CGCCGAAGCCTGCATAGCCGGAGACCGAATGGAAATAGCCGGCCAGACCG
GCATGTCCCCGACATCAACCGAAGTCCCACCCACCCTCGAAGAAGAAGTT
GCGCAAGCATTCAACAACATCAACGAAGTTATCCTCTACACACTAGAGAA
AGCCAAGCCCGATCTGCGCGCTAGCGTCAAGAGCGGCTGGGACCGCGTCG
TGAAGATCCGCACCTACCATGTCCAGTTGCCCCAGACCCGAGAGAAGATT
ATTGGCCTGATGGTGGAGAATGTTAAGAAGTGGTGTCCGGATCACCAGCC
TACTTGGACTATGTTGGGGATTGAGGCCTTGCCGTTTGAAGGGCAGAATT
TGGAGATTGAGGTGGATGTTTTCTTGGGGTGAATGTCCCCAATCCCCAGC
TACTCCCGCCCCGGCCGCGGCCAACACTTCCAAGACGCCTACGGCTTCGC
CGAAGCCTGCATAGCCGGAGACCGAATGGAAATAGCCGGCCAGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009933KJC3_009933Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009933-T1KJC3_009933-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009933-T1.cdsKJC3_009933-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009933-T1.utr3p1KJC3_009933-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009933-T1.exon2KJC3_009933-T1.exon2Aspergillus niger KJC3exon
KJC3_009933-T1.exon1KJC3_009933-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009933-T1.utr5p1KJC3_009933-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035959
DBxrefInterPro:IPR006175
DBxrefPFAM:PF01042
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1874747..1875407 -
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