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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1893775..1895556+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009942-T1 ID=KJC3_009942-T1|Name=KJC3_009942-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1782bp|location=Sequence derived from alignment at ch7:1893775..1895556+ (Aspergillus niger KJC3)
CTTATCTTATCGTCCTTTCACGTGATAAATTAGTCATCTCAGCGATTCCG
CCACCCGCTCCGCGTCTTGATTCCAAAGCGCTCCGCTCGACATCTCAGCG
TTCTCTTCTGTCCTTGTACCTTGCTTTCTCTAGGAGGTTATCTAGACATT
ATTGTCTTTGCCACCATGCCGCGCGCAGAAGCTGGATCCACAAAGGCGAT
CAGCAACAAGATCAAGGCTGTACGTTGCCCTCTTGTCCACACGTAAAACA
ACTTACTAACGTCCAACAGAAAGGCTTAGGCAGACTTAGATGGTATTGTC
AGGCTTGTTCGCGCCAGTGTCGCGATGAGAACGGATTTCGCTGGTAAGTT
CTACAATTTGTGGAACATCCAATTTCTATGATACTGACTTTTCAAAGCCA
TGTCCAGAGTGAAAGCCATGTGCGCCAGGTGCTGCTGATCGGCGAAGACC
CCAAGAAATACATCGAAGATTACAGCAAGCAATTCCTCGACAACTTCCTC
AATCTTCTAAAGACCGGTCATGGCGAGAAGAAAGTTCACATCAACCAGTT
CTACCAGCAAGTCATTGCCGATAAGGAGGTTAGTGGTCCGAGTGGTCCTT
GCGGAATGAGTCTGTCGCTAACATACATGTAGCACATCCATATGAACGCC
ACGAAGTGGAAGAGTCTTTCGCAGTTTGCTGCATACCTGGGTCGCGAGGG
TATTTGCCGTGTCGAGGAGACAGAGAAGGGCCTGTTCGTCTCTTATATCG
ATCGGAGTCCGGAGGCCATGAGACGACAGGAAGCTTTGCTCAAGAAGGAA
CGCCAGGACCGGGGAGATGAGGAGCAGGAGCAACGACAGATTCGAGAGCA
GATCAAGCGTGCTCAGCAGAGTGCGAAGGAGGAGGAAGAGGTGGACCCTG
AAGCTCGCAAGCTGCAGCGCAAGGAGGGTGAGAAAGTCAAGTTGAATATC
GGATTCGGTTCGAAGGCAAACGGCGATTCGAAGAGCGAGTCGCCGAAGCC
CGCATCGCCTGAGGAAAAGGATAGCGGTGCATCGGCCACGCCAGAGACTA
CCGATGCTGCACCTACTCCCGCTGCCGTTCCCGCCCCCGCCCCGCCTGCG
CCACAGGCTGCGCCGAAGGTGTCTCTGTCATTCGGTGGTGGTGGAAACAA
GCCGAAGAATGTCTTTGCTGCGGCTGTAAAGAAGAATCCTCTTGCGGGAA
AGAAGGGGCCGGTCATGGAACAGCCCAAGAAGATGACGGAGCAGGAGCGC
ATTATGAAGCAGGAGATGGAGGCTATGGAGCGGAAACGTATGCGTGGCTC
TGCTGGGTTCCCTGACGCGAAGCGCCCGAAGATCTCTTGAGTTGGTCGTT
CGACGATAATATTCCTACGTGGGTTGTACCCATACTCCACACCCCCATCG
GCTTCGATGCCGCTCCGCCCAGGCGACGTTAATGCATTTGTTCCCGTCGG
CCAGTGGGCAATGGAGAAACGCCATGGGGGATGTTACTATGACAAGTCAG
ACCTCGATGACTTTTATACCGTGCGTTCTCGATGTCGGTGGCAGCATTCA
GGGCAACGCGTTCTTGCGATGCCCGTTCGGTCGGATATTTTTTGACTGGG
ACGTACTCTTTCTGCTGGGTTTAATGACTAGGCTATTGGCGTAGTCACCT
TGAATTCCTCGGTCGCCTATGATAGATACATGACTAGATATCGTTGGCCA
GTAACATTGCCAGCGAATGAATATATAACTTGCTTATTATATGTCGATGT
ATCTCTAAGTATTGTCTTGATGAGTAAAGTGC back to topCoding sequence (CDS) from alignment at ch7:1893775..1895556+ >KJC3_009942-T1 ID=KJC3_009942-T1|Name=KJC3_009942-T1|organism=Aspergillus niger KJC3|type=CDS|length=4068bp|location=Sequence derived from alignment at ch7:1893775..1895556+ (Aspergillus niger KJC3)
ATGCCGCGCGCAGAAGCTGGATCCACAAAGGCGATCAGCAACAAGATCAA
GGCTAAAGGCTTAGGCAGACTTAGATGGTATTGTCAGGCTTGTTCGCGCC
AGTGTCGCGATGAGAACGGATTTCGCTGCCATGTCCAGAGTGAAAGCCAT
GTGCGCCAGGTGCTGCTGATCGGCGAAGACCCCAAGAAATACATCGAAGA
TTACAGCAAGCAATTCCTCGACAACTTCCTCAATCTTCTAAAGACCGGTC
ATGGCGAGAAGAAAGTTCACATCAACCAGTTCTACCAGCAAGTCATTGCC
GATAAGGAGCACATCCATATGAACGCCACGAAGTGGAAGAGTCTTTCGCA
GTTTGCTGCATACCTGGGTCGCGAGGGTATTTGCCGTGTCGAGGAGACAG
AGAAGGGCCTGTTCGTCTCTTATATCGATCGGAGTCCGGAGGCCATGAGA
CGACAGGAAGCTTTGCTCAAGAAGGAACGCCAGGACCGGGGAGATGAGGA
GCAGGAGCAACGACAGATTCGAGAGCAGATCAAGCGTGCTCAGCAGAGTG
CGAAGGAGGAGGAAGAGGTGGACCCTGAAGCTCGCAAGCTGCAGCGCAAG
GAGGGTGAGAAAGTCAAGTTGAATATCGGATTCGGTTCGAAGGCAAACGG
CGATTCGAAGAGCGAGTCGCCGAAGCCCGCATCGCCTGAGGAAAAGGATA
GCGGTGCATCGGCCACGCCAGAGACTACCGATGCTGCACCTACTCCCGCT
GCCGTTCCCGCCCCCGCCCCGCCTGCGCCACAGGCTGCGCCGAAGGTGTC
TCTGTCATTCGGTGGTGGTGGAAACAAGCCGAAGAATGTCTTTGCTGCGG
CTGTAAAGAAGAATCCTCTTGCGGGAAAGAAGGGGCCGGTCATGGAACAG
CCCAAGAAGATGACGGAGCAGGAGCGCATTATGAAGCAGGAGATGGAGGC
TATGGAGCGGAAACGTATGCGTGGCTCTGCTGGGTTCCCTGACGCGAAGC
GCCCGAAGATCTCTTGAATGCCGCGCGCAGAAGCTGGATCCACAAAGGCG
ATCAGCAACAAGATCAAGGCTAAAGGCTTAGGCAGACTTAGATGGTATTG
TCAGGCTTGTTCGCGCCAGTGTCGCGATGAGAACGGATTTCGCTGCCATG
TCCAGAGTGAAAGCCATGTGCGCCAGGTGCTGCTGATCGGCGAAGACCCC
AAGAAATACATCGAAGATTACAGCAAGCAATTCCTCGACAACTTCCTCAA
TCTTCTAAAGACCGGTCATGGCGAGAAGAAAGTTCACATCAACCAGTTCT
ACCAGCAAGTCATTGCCGATAAGGAGCACATCCATATGAACGCCACGAAG
TGGAAGAGTCTTTCGCAGTTTGCTGCATACCTGGGTCGCGAGGGTATTTG
CCGTGTCGAGGAGACAGAGAAGGGCCTGTTCGTCTCTTATATCGATCGGA
GTCCGGAGGCCATGAGACGACAGGAAGCTTTGCTCAAGAAGGAACGCCAG
GACCGGGGAGATGAGGAGCAGGAGCAACGACAGATTCGAGAGCAGATCAA
GCGTGCTCAGCAGAGTGCGAAGGAGGAGGAAGAGGTGGACCCTGAAGCTC
GCAAGCTGCAGCGCAAGGAGGGTGAGAAAGTCAAGTTGAATATCGGATTC
GGTTCGAAGGCAAACGGCGATTCGAAGAGCGAGTCGCCGAAGCCCGCATC
GCCTGAGGAAAAGGATAGCGGTGCATCGGCCACGCCAGAGACTACCGATG
CTGCACCTACTCCCGCTGCCGTTCCCGCCCCCGCCCCGCCTGCGCCACAG
GCTGCGCCGAAGGTGTCTCTGTCATTCGGTGGTGGTGGAAACAAGCCGAA
GAATGTCTTTGCTGCGGCTGTAAAGAAGAATCCTCTTGCGGGAAAGAAGG
GGCCGGTCATGGAACAGCCCAAGAAGATGACGGAGCAGGAGCGCATTATG
AAGCAGGAGATGGAGGCTATGGAGCGGAAACGTATGCGTGGCTCTGCTGG
GTTCCCTGACGCGAAGCGCCCGAAGATCTCTTGAATGCCGCGCGCAGAAG
CTGGATCCACAAAGGCGATCAGCAACAAGATCAAGGCTAAAGGCTTAGGC
AGACTTAGATGGTATTGTCAGGCTTGTTCGCGCCAGTGTCGCGATGAGAA
CGGATTTCGCTGCCATGTCCAGAGTGAAAGCCATGTGCGCCAGGTGCTGC
TGATCGGCGAAGACCCCAAGAAATACATCGAAGATTACAGCAAGCAATTC
CTCGACAACTTCCTCAATCTTCTAAAGACCGGTCATGGCGAGAAGAAAGT
TCACATCAACCAGTTCTACCAGCAAGTCATTGCCGATAAGGAGCACATCC
ATATGAACGCCACGAAGTGGAAGAGTCTTTCGCAGTTTGCTGCATACCTG
GGTCGCGAGGGTATTTGCCGTGTCGAGGAGACAGAGAAGGGCCTGTTCGT
CTCTTATATCGATCGGAGTCCGGAGGCCATGAGACGACAGGAAGCTTTGC
TCAAGAAGGAACGCCAGGACCGGGGAGATGAGGAGCAGGAGCAACGACAG
ATTCGAGAGCAGATCAAGCGTGCTCAGCAGAGTGCGAAGGAGGAGGAAGA
GGTGGACCCTGAAGCTCGCAAGCTGCAGCGCAAGGAGGGTGAGAAAGTCA
AGTTGAATATCGGATTCGGTTCGAAGGCAAACGGCGATTCGAAGAGCGAG
TCGCCGAAGCCCGCATCGCCTGAGGAAAAGGATAGCGGTGCATCGGCCAC
GCCAGAGACTACCGATGCTGCACCTACTCCCGCTGCCGTTCCCGCCCCCG
CCCCGCCTGCGCCACAGGCTGCGCCGAAGGTGTCTCTGTCATTCGGTGGT
GGTGGAAACAAGCCGAAGAATGTCTTTGCTGCGGCTGTAAAGAAGAATCC
TCTTGCGGGAAAGAAGGGGCCGGTCATGGAACAGCCCAAGAAGATGACGG
AGCAGGAGCGCATTATGAAGCAGGAGATGGAGGCTATGGAGCGGAAACGT
ATGCGTGGCTCTGCTGGGTTCCCTGACGCGAAGCGCCCGAAGATCTCTTG
AATGCCGCGCGCAGAAGCTGGATCCACAAAGGCGATCAGCAACAAGATCA
AGGCTAAAGGCTTAGGCAGACTTAGATGGTATTGTCAGGCTTGTTCGCGC
CAGTGTCGCGATGAGAACGGATTTCGCTGCCATGTCCAGAGTGAAAGCCA
TGTGCGCCAGGTGCTGCTGATCGGCGAAGACCCCAAGAAATACATCGAAG
ATTACAGCAAGCAATTCCTCGACAACTTCCTCAATCTTCTAAAGACCGGT
CATGGCGAGAAGAAAGTTCACATCAACCAGTTCTACCAGCAAGTCATTGC
CGATAAGGAGCACATCCATATGAACGCCACGAAGTGGAAGAGTCTTTCGC
AGTTTGCTGCATACCTGGGTCGCGAGGGTATTTGCCGTGTCGAGGAGACA
GAGAAGGGCCTGTTCGTCTCTTATATCGATCGGAGTCCGGAGGCCATGAG
ACGACAGGAAGCTTTGCTCAAGAAGGAACGCCAGGACCGGGGAGATGAGG
AGCAGGAGCAACGACAGATTCGAGAGCAGATCAAGCGTGCTCAGCAGAGT
GCGAAGGAGGAGGAAGAGGTGGACCCTGAAGCTCGCAAGCTGCAGCGCAA
GGAGGGTGAGAAAGTCAAGTTGAATATCGGATTCGGTTCGAAGGCAAACG
GCGATTCGAAGAGCGAGTCGCCGAAGCCCGCATCGCCTGAGGAAAAGGAT
AGCGGTGCATCGGCCACGCCAGAGACTACCGATGCTGCACCTACTCCCGC
TGCCGTTCCCGCCCCCGCCCCGCCTGCGCCACAGGCTGCGCCGAAGGTGT
CTCTGTCATTCGGTGGTGGTGGAAACAAGCCGAAGAATGTCTTTGCTGCG
GCTGTAAAGAAGAATCCTCTTGCGGGAAAGAAGGGGCCGGTCATGGAACA
GCCCAAGAAGATGACGGAGCAGGAGCGCATTATGAAGCAGGAGATGGAGG
CTATGGAGCGGAAACGTATGCGTGGCTCTGCTGGGTTCCCTGACGCGAAG
CGCCCGAAGATCTCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009942-T1.utr5p1 | KJC3_009942-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009942-T1.utr3p1 | KJC3_009942-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092657UN |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR038254 |
| DBxref | InterPro:IPR019447 |
| DBxref | PFAM:PF10357 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1893775..1895556 + |
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