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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1896168..1897807+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009944-T1 ID=KJC3_009944-T1|Name=KJC3_009944-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1640bp|location=Sequence derived from alignment at ch7:1896168..1897807+ (Aspergillus niger KJC3)
CGCCAACACAATTGTCTCTCCCAAGCAAGGAGAGAGAGAAGAAGCTGACG
AGAAAAAGAGTCAATGATCAACCAGGGAGGCAGCAAAATAGTTCTTTTTC
TTTTATTAGCTGATGAGCTGTATCTTTGCTCCAAATTGATATGAAGCTTT
TCTTTCGTCCCCCTCATGAGCCCGACTCAGCAGGAATCCGCCATCAGCTC
GCACTTGGCCTTGAACTCTCCTGCCTGCGCCCTTCTCCACGTACCCCGTC
TAGAATGTAACACAACGTGACCTAATCAGCATATGAATCTGACACAAGAC
GTGAGGGTTCTTGAACTCAATCCAATGCGTTGTCACCAACCGACCCACCA
TCCCCGCAGTGAGCCATAATGTCTATCTATCGTTCGGGATCACACCCGAG
CCCGGCATGTCGCGCCGTGCTTTTCCCTCCACTGGCGGAGATACGTTCCG
CTAATTGATTGACTCATTCATCTAATTTCATTTTTTTCACATTTGAATCC
TGGACATATACAAAAATCACACGGCAATCGAGAGTCACACCTACACACAC
TCAAAAGATACCACTGAAACTAAAGATGGCCGTACAATCGCTTTCCCCCG
AGGGGAGGCAGAAAACACTCGCTTTTATCGGATGTGGTATGTATCTATCA
CCAAAACTACAATCAAACAATGATCAACAAACCCCCAATATTTACAGCCT
ACTGACGAAGAATAAAGGCAACATGGGCTCCGCCATTCTAAGCGGCCTAC
TGGACGCAACGCGCACCCAAGCTGGAAAAGTCAATCACTTCATCATAAGC
ACCAAGACCGCCGCATCCGCGGAACGTCTCCGCAGCCAATATGCAGAGGA
CTCATCCCGCGTGACCATAGCACATGACTCCAACCTCCGCGCAATGCGCG
AAGCAGACATCATCCTACTAGCCTGCAAGCCCTTTCTAGCCAAGGGTATT
CTCTCCGCTCCGGGAGTGGGGGAAGCGTTGTCCGGAAAGCTAGTGATTAG
TATCATGGCCGGGATGACGCCCACTGACATACTCGACTGTCTGAGCGACG
GTGATCGCGAGAGCGTGAAGATTGTCCGGGCGATGCCGAATGTCGCGGCG
CGGTTGCGCCAGTCTATGACTATTGTTGAGCTTCCTGAGACGAAGCCGCT
GGAGGAGGAGTTGGTGGAGATTGTGACGTGGGTGTTTGAGGTGATTGGGA
AGGTCAAGTTCTTGAGCGCGGATTTGTTTGATGCTGGGACGATGTTGGTC
GGGGCTGGGATAGGCGTTATGACGGTGCCTTTGGAGGGATTGTTGGATGG
GTGTGTGGTGGAGGGGTTGAGGAGGGCGGAGGCGCTGGAAATGGCGGCTC
AGATGTTGTCGGGGATGGCGGCGCTGCTGAAGGAGGGATCGCATCCTGCT
GTTTTAAGGGAGAATATTTCGTCGCCGAGAGGGTGTACTATTCAAGGAGT
GATGACGGCGGAGAGAGCTGGAGCAAGAGCGACATTTGCAGATGCGGTGA
TTAATGGCACGAGGCATCTGAAGGGGGATCGGTAGGTGAGGTTACTATAC
TCGGGGTATGTTTCCGAATAGATTAGCTCGAAAGATAGAGAACATAGCAA
CACTCATAAATAGATAGAACACTGATAGAACCCCGTCGAT back to topCoding sequence (CDS) from alignment at ch7:1896168..1897807+ >KJC3_009944-T1 ID=KJC3_009944-T1|Name=KJC3_009944-T1|organism=Aspergillus niger KJC3|type=CDS|length=1758bp|location=Sequence derived from alignment at ch7:1896168..1897807+ (Aspergillus niger KJC3)
ATGGCCGTACAATCGCTTTCCCCCGAGGGGAGGCAGAAAACACTCGCTTT
TATCGGATGTGGCAACATGGGCTCCGCCATTCTAAGCGGCCTACTGGACG
CAACGCGCACCCAAGCTGGAAAAGTCAATCACTTCATCATAAGCACCAAG
ACCGCCGCATCCGCGGAACGTCTCCGCAGCCAATATGCAGAGGACTCATC
CCGCGTGACCATAGCACATGACTCCAACCTCCGCGCAATGCGCGAAGCAG
ACATCATCCTACTAGCCTGCAAGCCCTTTCTAGCCAAGGGTATTCTCTCC
GCTCCGGGAGTGGGGGAAGCGTTGTCCGGAAAGCTAGTGATTAGTATCAT
GGCCGGGATGACGCCCACTGACATACTCGACTGTCTGAGCGACGGTGATC
GCGAGAGCGTGAAGATTGTCCGGGCGATGCCGAATGTCGCGGCGCGGTTG
CGCCAGTCTATGACTATTGTTGAGCTTCCTGAGACGAAGCCGCTGGAGGA
GGAGTTGGTGGAGATTGTGACGTGGGTGTTTGAGGTGATTGGGAAGGTCA
AGTTCTTGAGCGCGGATTTGTTTGATGCTGGGACGATGTTGGTCGGGGCT
GGGATAGGCGTTATGACGGTGCCTTTGGAGGGATTGTTGGATGGGTGTGT
GGTGGAGGGGTTGAGGAGGGCGGAGGCGCTGGAAATGGCGGCTCAGATGT
TGTCGGGGATGGCGGCGCTGCTGAAGGAGGGATCGCATCCTGCTGTTTTA
AGGGAGAATATTTCGTCGCCGAGAGGGTGTACTATTCAAGGAGTGATGAC
GGCGGAGAGAGCTGGAGCAAGAGCGACATTTGCAGATGCGGTGATTAATG
GCACGAGGCATCTGAAGGGGGATCGGTAGATGGCCGTACAATCGCTTTCC
CCCGAGGGGAGGCAGAAAACACTCGCTTTTATCGGATGTGGCAACATGGG
CTCCGCCATTCTAAGCGGCCTACTGGACGCAACGCGCACCCAAGCTGGAA
AAGTCAATCACTTCATCATAAGCACCAAGACCGCCGCATCCGCGGAACGT
CTCCGCAGCCAATATGCAGAGGACTCATCCCGCGTGACCATAGCACATGA
CTCCAACCTCCGCGCAATGCGCGAAGCAGACATCATCCTACTAGCCTGCA
AGCCCTTTCTAGCCAAGGGTATTCTCTCCGCTCCGGGAGTGGGGGAAGCG
TTGTCCGGAAAGCTAGTGATTAGTATCATGGCCGGGATGACGCCCACTGA
CATACTCGACTGTCTGAGCGACGGTGATCGCGAGAGCGTGAAGATTGTCC
GGGCGATGCCGAATGTCGCGGCGCGGTTGCGCCAGTCTATGACTATTGTT
GAGCTTCCTGAGACGAAGCCGCTGGAGGAGGAGTTGGTGGAGATTGTGAC
GTGGGTGTTTGAGGTGATTGGGAAGGTCAAGTTCTTGAGCGCGGATTTGT
TTGATGCTGGGACGATGTTGGTCGGGGCTGGGATAGGCGTTATGACGGTG
CCTTTGGAGGGATTGTTGGATGGGTGTGTGGTGGAGGGGTTGAGGAGGGC
GGAGGCGCTGGAAATGGCGGCTCAGATGTTGTCGGGGATGGCGGCGCTGC
TGAAGGAGGGATCGCATCCTGCTGTTTTAAGGGAGAATATTTCGTCGCCG
AGAGGGTGTACTATTCAAGGAGTGATGACGGCGGAGAGAGCTGGAGCAAG
AGCGACATTTGCAGATGCGGTGATTAATGGCACGAGGCATCTGAAGGGGG
ATCGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004735 | pyrroline-5-carboxylate reductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006561 | proline biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009944-T1.utr5p1 | KJC3_009944-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009944-T1.utr3p1 | KJC3_009944-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR000304 |
| DBxref | InterPro:IPR028939 |
| DBxref | InterPro:IPR029036 |
| DBxref | PFAM:PF14748 |
| DBxref | PFAM:PF03807 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1896168..1897807 + |
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