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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1952252..1953031- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009964-T1 ID=KJC3_009964-T1|Name=KJC3_009964-T1|organism=Aspergillus niger KJC3|type=mRNA|length=780bp|location=Sequence derived from alignment at ch7:1952252..1953031- (Aspergillus niger KJC3)
TGCTTAACGCATCAATTTTAGTATCTATTTAGTAGTAATCTGTGACTATC
AGCATATCCAAAATGTCCGCTTCGGTTAGTATTTACTCTCCTTAGGTGGG
CTTACTGCAGTCGTGTGGCTCATCCTGATTTCGTAGGAATCCAAGGGAAC
ACAGGGTTTTTACGATGAGCTGAAGGCTCTCTTCCAGCAGGCGGTAAGTT
GTAGCTAAAATCACCTGGGATATTATGCACTAATGCGCAATGCAGGATAA
ATCTGGCGAAGGTAAATATCACGTTTAGGATGTTCATGACTGGCTTCCTG
ATACTGATGCTGCTTCTATCATAATTAGGAAAGCTCGCTCTCCCCGAGTT
CAAGGCCGCCGTGAAGGGTAGCAGCAGCGGCAGTCAACTGAATGACATGC
AGTTGGAGGCCATGTTCAACTTCTATGATGAAGACAAGACTGGATTTGTC
TCCTTCGAGAGTACGCGTTGTCCACTTCTTCCTTTTCTCTCTGGTACTTT
GTCCGGGCTAATGCAAAGTCGCGCAGGTGTGTGGAAGAAGATGAACAGTA
TGATGAAATGAGGGCCACGTCTTGGATAGAGGGAAATAGTATGTGAGTTA
TAAAGATAATCTCAACACGCTGAGGAGTATCCAAGAGGGAGCGAGATTAC
ATGGAACGATCAAGGACTATTTAGTAAAACCTGCGTACTACAAATTATCA
TGGGCCGAATCGCGGCGAAATAAAAAACCATACTATATATCATGACGACG
CTGTATAGGAATATAATTTTTTTCTCCTAC back to topCoding sequence (CDS) from alignment at ch7:1952252..1953031- >KJC3_009964-T1 ID=KJC3_009964-T1|Name=KJC3_009964-T1|organism=Aspergillus niger KJC3|type=CDS|length=1260bp|location=Sequence derived from alignment at ch7:1952252..1953031- (Aspergillus niger KJC3)
GTGTGTGGAAGAAGATGAACAGTATGATGAAATGAGAAAGCTCGCTCTCC
CCGAGTTCAAGGCCGCCGTGAAGGGTAGCAGCAGCGGCAGTCAACTGAAT
GACATGCAGTTGGAGGCCATGTTCAACTTCTATGATGAAGACAAGACTGG
ATTTGTCTCCTTCGAGAGATAAATCTGGCGAAGGAATCCAAGGGAACACA
GGGTTTTTACGATGAGCTGAAGGCTCTCTTCCAGCAGGCGATGTCCGCTT
CGGTGTGTGGAAGAAGATGAACAGTATGATGAAATGAGAAAGCTCGCTCT
CCCCGAGTTCAAGGCCGCCGTGAAGGGTAGCAGCAGCGGCAGTCAACTGA
ATGACATGCAGTTGGAGGCCATGTTCAACTTCTATGATGAAGACAAGACT
GGATTTGTCTCCTTCGAGAGATAAATCTGGCGAAGGAATCCAAGGGAACA
CAGGGTTTTTACGATGAGCTGAAGGCTCTCTTCCAGCAGGCGATGTCCGC
TTCGGTGTGTGGAAGAAGATGAACAGTATGATGAAATGAGAAAGCTCGCT
CTCCCCGAGTTCAAGGCCGCCGTGAAGGGTAGCAGCAGCGGCAGTCAACT
GAATGACATGCAGTTGGAGGCCATGTTCAACTTCTATGATGAAGACAAGA
CTGGATTTGTCTCCTTCGAGAGATAAATCTGGCGAAGGAATCCAAGGGAA
CACAGGGTTTTTACGATGAGCTGAAGGCTCTCTTCCAGCAGGCGATGTCC
GCTTCGGTGTGTGGAAGAAGATGAACAGTATGATGAAATGAGAAAGCTCG
CTCTCCCCGAGTTCAAGGCCGCCGTGAAGGGTAGCAGCAGCGGCAGTCAA
CTGAATGACATGCAGTTGGAGGCCATGTTCAACTTCTATGATGAAGACAA
GACTGGATTTGTCTCCTTCGAGAGATAAATCTGGCGAAGGAATCCAAGGG
AACACAGGGTTTTTACGATGAGCTGAAGGCTCTCTTCCAGCAGGCGATGT
CCGCTTCGGTGTGTGGAAGAAGATGAACAGTATGATGAAATGAGAAAGCT
CGCTCTCCCCGAGTTCAAGGCCGCCGTGAAGGGTAGCAGCAGCGGCAGTC
AACTGAATGACATGCAGTTGGAGGCCATGTTCAACTTCTATGATGAAGAC
AAGACTGGATTTGTCTCCTTCGAGAGATAAATCTGGCGAAGGAATCCAAG
GGAACACAGGGTTTTTACGATGAGCTGAAGGCTCTCTTCCAGCAGGCGAT
GTCCGCTTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005509 | calcium ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009964-T1.utr3p1 | KJC3_009964-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009964-T1.utr5p1 | KJC3_009964-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011992 |
| DBxref | InterPro:IPR018247 |
| DBxref | InterPro:IPR002048 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1952252..1953031 - |
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