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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2006333..2007900- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009983-T1 ID=KJC3_009983-T1|Name=KJC3_009983-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1568bp|location=Sequence derived from alignment at ch7:2006333..2007900- (Aspergillus niger KJC3)
GTTGACCCCTGGCCTTGCGCAACGTGGATGTCCTTTTTCTTACTGCTTTC
TCTTTAAATCCAAAGTCACTCGCTCTCTGTCTACCTTGGCCCAGCCGTTT
ACGGATGAAAACCGTGTCGACGATCTATGACGTTTTGCTTGTTCGATCAG
TCAACAAGCGTTTATATCATAGAATGGGCTGAGTGTACGCCTTTCCTGCC
CTTCTCTGGCTTTGTGCGTTTTCACTGTGGTTAGATACGCTTGTGTGTGA
ATAATTTTTACTGTCGCTCTTTCGCTCCCTGAGGTGGCTGCTCAGTCTGG
ATTCACAAGATGGACGCCAAGGGACTCCACCGGTTTTCCCACTTTTCCTG
TCGGACCCAGCAGGTCGTCACCTCGTCCACCTGGGAGGGTTTGCTCATCG
AGCAGTCCACCCTGTCTGCTGATACGAAAGGGTCAGAGCGGGATACGTGG
TGGGTTGACATCTGCGACGCCACTGAGGAGGAGGTCAGCACTGTCTGCCA
GGCATTATCGATCCATCCCCTGACGGCAGAGGACATCGCGACCCGGGAAC
CTCGCGAGAAGATTGAGGCGTTTCGCAACTACTACCTAATATCTTTTCAA
ACCCTGCTTCCAACAGACGACTTTAAGAGTTCTCGAAGCCTCAAGCCATC
ATCGTCCATCCCCGGCTCCGCGGGTTTCTATATACTGGTGTTCAAGAACG
CCACGGTGACCTTTTCTCCCAGTGGATGTCACCACATCGCCCGAGTCCGG
GACCGGATCCGTCGGACTCAGGACACACATTTGGTGTCGAGTGATTGGAT
CTGCTACGCTCTTATGTACGCCCGCTATTCCTTGTCCTGATCCTCCCAGA
CTCCAACTAAAACTAAAATCCAGTGACGAAATTATCGATGATTTCGAACC
GTACATGCGCGCAGCAGAACGTGAAGCCGATGCGATCGAAGATCAAGTGT
TCATCGCCCGCGTCGACGACGTCAAAGCGCTCATTCCTCAACTTGATAGC
CTCCGCAAGAGTATCACTCAGCTCATCCGCTGCCTGACCGGCAAGTACGA
CGTCTTAAGTGGCTTCGTCAAGCGTTGTCAGGCAAAAGACAGAAACCCAA
TGTTCCCGGACGGCGATCTCTTGGTGTATCTGGGCGACGTACAAGATCAT
CTCGTGACCACATTGACCAGTTTGTCCCATTTCGATGAAATTGTGGGCCG
GTCACAGTCGAACTTCCTGGCCCAGTTGAGCGTCAACAATATCCGGTTGA
GTTATGACGTGAATGCAGTCTTGAGTAAGGTGACTATCCTGGCGACAATC
TTCGTACCCTTGCACATGGTTACTGGGTTGTTTGGTATGAACGTCGAGGT
GCCTGGACAGAATGTGGATAATCTGGGATGGTTTTTTGGTATCGTAGGGT
GTATGTGCGCGTTTGTTATGGTTTGTTGCTTGCTTGCGAAGAGGCTGCGG
TTGCTCTAGACACGATTCGGGGTTCTATGGTTATTTTCATATGATCGGGA
ATCATTGATAATAGCATCAATAAAGCGCTGATCTCCCGGAATAATCCTGC
TGGACAAGATCTTTCAAC back to topCoding sequence (CDS) from alignment at ch7:2006333..2007900- >KJC3_009983-T1 ID=KJC3_009983-T1|Name=KJC3_009983-T1|organism=Aspergillus niger KJC3|type=CDS|length=2184bp|location=Sequence derived from alignment at ch7:2006333..2007900- (Aspergillus niger KJC3)
TGACGAAATTATCGATGATTTCGAACCGTACATGCGCGCAGCAGAACGTG
AAGCCGATGCGATCGAAGATCAAGTGTTCATCGCCCGCGTCGACGACGTC
AAAGCGCTCATTCCTCAACTTGATAGCCTCCGCAAGAGTATCACTCAGCT
CATCCGCTGCCTGACCGGCAAGTACGACGTCTTAAGTGGCTTCGTCAAGC
GTTGTCAGGCAAAAGACAGAAACCCAATGTTCCCGGACGGCGATCTCTTG
GTGTATCTGGGCGACGTACAAGATCATCTCGTGACCACATTGACCAGTTT
GTCCCATTTCGATGAAATTGTGGGCCGGTCACAGTCGAACTTCCTGGCCC
AGTTGAGCGTCAACAATATCCGGTTGAGTTATGACGTGAATGCAGTCTTG
AGTAAGGTGACTATCCTGGCGACAATCTTCGTACCCTTGCACATGGTTAC
TGGGTTGTTTGGTATGAACGTCGAGGTGCCTGGACAGAATGTGGATAATC
TGGGATGGTTTTTTGGTATCGTAGGGTGTATGTGCGCGTTTGTTATGGTT
TGTTGCTTGCTTGCGAAGAGGCTGCGGTTGCTCTAGATGGACGCCAAGGG
ACTCCACCGGTTTTCCCACTTTTCCTGTCGGACCCAGCAGGTCGTCACCT
CGTCCACCTGGGAGGGTTTGCTCATCGAGCAGTCCACCCTGTCTGCTGAT
ACGAAAGGGTCAGAGCGGGATACGTGGTGGGTTGACATCTGCGACGCCAC
TGAGGAGGAGGTCAGCACTGTCTGCCAGGCATTATCGATCCATCCCCTGA
CGGCAGAGGACATCGCGACCCGGGAACCTCGCGAGAAGATTGAGGCGTTT
CGCAACTACTACCTAATATCTTTTCAAACCCTGCTTCCAACAGACGACTT
TAAGAGTTCTCGAAGCCTCAAGCCATCATCGTCCATCCCCGGCTCCGCGG
GTTTCTATATACTGGTGTTCAAGAACGCCACGGTGACCTTTTCTCCCAGT
GGATGTCACCACATCGCCCGAGTCCGGGACCGGATCCGTCGGACTCAGGA
CACACATTTGGTGTCGAGTGATTGGATCTGCTACGCTCTTATTGACGAAA
TTATCGATGATTTCGAACCGTACATGCGCGCAGCAGAACGTGAAGCCGAT
GCGATCGAAGATCAAGTGTTCATCGCCCGCGTCGACGACGTCAAAGCGCT
CATTCCTCAACTTGATAGCCTCCGCAAGAGTATCACTCAGCTCATCCGCT
GCCTGACCGGCAAGTACGACGTCTTAAGTGGCTTCGTCAAGCGTTGTCAG
GCAAAAGACAGAAACCCAATGTTCCCGGACGGCGATCTCTTGGTGTATCT
GGGCGACGTACAAGATCATCTCGTGACCACATTGACCAGTTTGTCCCATT
TCGATGAAATTGTGGGCCGGTCACAGTCGAACTTCCTGGCCCAGTTGAGC
GTCAACAATATCCGGTTGAGTTATGACGTGAATGCAGTCTTGAGTAAGGT
GACTATCCTGGCGACAATCTTCGTACCCTTGCACATGGTTACTGGGTTGT
TTGGTATGAACGTCGAGGTGCCTGGACAGAATGTGGATAATCTGGGATGG
TTTTTTGGTATCGTAGGGTGTATGTGCGCGTTTGTTATGGTTTGTTGCTT
GCTTGCGAAGAGGCTGCGGTTGCTCTAGATGGACGCCAAGGGACTCCACC
GGTTTTCCCACTTTTCCTGTCGGACCCAGCAGGTCGTCACCTCGTCCACC
TGGGAGGGTTTGCTCATCGAGCAGTCCACCCTGTCTGCTGATACGAAAGG
GTCAGAGCGGGATACGTGGTGGGTTGACATCTGCGACGCCACTGAGGAGG
AGGTCAGCACTGTCTGCCAGGCATTATCGATCCATCCCCTGACGGCAGAG
GACATCGCGACCCGGGAACCTCGCGAGAAGATTGAGGCGTTTCGCAACTA
CTACCTAATATCTTTTCAAACCCTGCTTCCAACAGACGACTTTAAGAGTT
CTCGAAGCCTCAAGCCATCATCGTCCATCCCCGGCTCCGCGGGTTTCTAT
ATACTGGTGTTCAAGAACGCCACGGTGACCTTTTCTCCCAGTGGATGTCA
CCACATCGCCCGAGTCCGGGACCGGATCCGTCGGACTCAGGACACACATT
TGGTGTCGAGTGATTGGATCTGCTACGCTCTTAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009983-T1.utr3p1 | KJC3_009983-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009983-T1.utr5p1 | KJC3_009983-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | PFAM:PF01544 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2006333..2007900 - |
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