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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2009325..2010668+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009985-T1 ID=KJC3_009985-T1|Name=KJC3_009985-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1344bp|location=Sequence derived from alignment at ch7:2009325..2010668+ (Aspergillus niger KJC3)
ATGACGATTCGTCTATAGACAGAATCTCAGTCTAGGATAGACTTTCGATA
CATCAAGCCTCATCACATTAGCATTGTACACAATGATTACTTACTGCCAT
GCAAACCGGTCGCTGGCAGCGAAAACTGGAATTGGGAGAAGCACCCAAAT
CCATCCAATCAGATGCGATGACTTTCGAATCAAAAGCACGCACAATTCCG
ACCAATCAGTAATCCCCGGAATTGAATCCGCTTCGTATCTTATAGCCTGA
GGCATCAACACAACCTTTCACAGCCCCCCACCACCGTCCAATCCGAGCTG
ATATCACCAATACCACTGACCACCATCAATTCAACAACAACACAATGGAT
AGCCTCAACTTCCCCACCCAAGACCGCGCCTTCTTGGAACCCCATCTCCC
ACCCAAATATGGCAACCCATCATCATCATCATCTCTCCCCTTCACCACCC
TCACCTTCGCCACATCCCTCGACTCACAATTAGCTCTTTCCCCGGGCACC
CGGACCGTGCTGTCCGGCCCGCAATCCAAAGCCATGACGCACTATCTACG
CTCACGCCATGACGCCATTCTCATCGGCGTAGGCACTGCCGTGGCTGACA
ACCCGGGCCTGAACTGTCGATTGGCAGGGGTAGGCGGATACGGCTCCGAA
GGTTTAGCGGGCCAGCCCCGACCAATTATCATCGACCCCTCAGCCAGATG
GGAGTTTACGGCGCACTCGAAAATCTTCGAGCTGGCGAGGAATGGGCGGG
GCAGGGCTCCGTTCATCATTACGGCTGCGGAGACGGTGCCTTCTGCACCT
CAGAGGGAGGTTTTGGAGAGTCATGGGGGGAAGTTTATTGCGTTGCCGGT
GGGGGTCGGTTCGGATGGTGCGCATCGGATCGATTGGACTGCGTTGTTGG
AGTGTCTTGTGCGTGAGGGGTTACGGAGCGTGATGATTGAGGGGGGCGGG
TCTATTATTAACTCGTTGCTTGAGCCGGGGTGTCAGACGTTGGTGGATTC
AGTGATTGTTACGATTGCTCCAACTTGGCTGGGGCAGGGAGGTGTGGTGG
TTTCGCCAAGGAGGAGGGTTGAAGGGGGTATGGTTGTTCCAGCTTCGAGA
TTGACCGGGGTCAAATGGTATCCGTTTGGGGAGGATGTGGTGCTTTGTGG
GAGGATCAAGGGGTCTGATTAGGGGGGTCTCCGTTCGCCAAAACGCATAT
TCATTCATGCAGTATAGAAAAGATGGTTCCTGAGTCATGATGCTTCCCTA
TGAATCAGATTTCCCTGTTGCAGCATATTCACGGTATCCAGTATGTTGTC
CATGCAGTTGAAGAGATACCGCCGAATACGCAGTGCTTCATTTC back to topCoding sequence (CDS) from alignment at ch7:2009325..2010668+ >KJC3_009985-T1 ID=KJC3_009985-T1|Name=KJC3_009985-T1|organism=Aspergillus niger KJC3|type=CDS|length=828bp|location=Sequence derived from alignment at ch7:2009325..2010668+ (Aspergillus niger KJC3)
ATGGATAGCCTCAACTTCCCCACCCAAGACCGCGCCTTCTTGGAACCCCA
TCTCCCACCCAAATATGGCAACCCATCATCATCATCATCTCTCCCCTTCA
CCACCCTCACCTTCGCCACATCCCTCGACTCACAATTAGCTCTTTCCCCG
GGCACCCGGACCGTGCTGTCCGGCCCGCAATCCAAAGCCATGACGCACTA
TCTACGCTCACGCCATGACGCCATTCTCATCGGCGTAGGCACTGCCGTGG
CTGACAACCCGGGCCTGAACTGTCGATTGGCAGGGGTAGGCGGATACGGC
TCCGAAGGTTTAGCGGGCCAGCCCCGACCAATTATCATCGACCCCTCAGC
CAGATGGGAGTTTACGGCGCACTCGAAAATCTTCGAGCTGGCGAGGAATG
GGCGGGGCAGGGCTCCGTTCATCATTACGGCTGCGGAGACGGTGCCTTCT
GCACCTCAGAGGGAGGTTTTGGAGAGTCATGGGGGGAAGTTTATTGCGTT
GCCGGTGGGGGTCGGTTCGGATGGTGCGCATCGGATCGATTGGACTGCGT
TGTTGGAGTGTCTTGTGCGTGAGGGGTTACGGAGCGTGATGATTGAGGGG
GGCGGGTCTATTATTAACTCGTTGCTTGAGCCGGGGTGTCAGACGTTGGT
GGATTCAGTGATTGTTACGATTGCTCCAACTTGGCTGGGGCAGGGAGGTG
TGGTGGTTTCGCCAAGGAGGAGGGTTGAAGGGGGTATGGTTGTTCCAGCT
TCGAGATTGACCGGGGTCAAATGGTATCCGTTTGGGGAGGATGTGGTGCT
TTGTGGGAGGATCAAGGGGTCTGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009231 | riboflavin biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009985-T1.utr5p1 | KJC3_009985-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009985-T1.utr3p1 | KJC3_009985-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024072 |
| DBxref | InterPro:IPR002734 |
| DBxref | PFAM:PF01872 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2009325..2010668 + |
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