You are here

Home

KJC3_009997-T2, KJC3_009997-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009997-T2
Unique NameKJC3_009997-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2034706..2036449+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009997-T2 ID=KJC3_009997-T2|Name=KJC3_009997-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1744bp|location=Sequence derived from alignment at ch7:2034706..2036449+ (Aspergillus niger KJC3)
CGGAGGGTCCGGGGGGTTATACTGTCAATACATAGCCCTCAAATACATTA
TATATATGCGCTCAGGGTTCTGTTTTCGATAAACATGTTTCCATCAACCC
ATAGATCACATCGAGCTGCACTGTACGCTCACTATCTAAGTTCAGCTTCA
CCTTGTCAAATCTGACTAGCAACCATGGCTCACGCTGAAGATGCTCCTAC
TGACTCGCCTCCCTCCGAATACACGTAAGTCACCCATCCCAAACCATACA
CATATCATCAACAACTTCCAGGCCGCGAGCAGTGCAGACCCTCCTGGGCT
CATTTTGCGGCATGTTCTGCACTGTTGGCTTCGTGAACTCCTTCGGCCTA
TTCCTAGAGTACTACAAAAAGGACCAACTATCAGACCAACCCGAATCGAC
CATCGCATGGATAGCAGCCATCGACATCTTCTTCATTTTTGGTGTATCTG
TCGTATCCGGGCCTCTCCTGGACACGATCGGCCCACGAGTCAGTACCCTA
TACTATCAACATAACACTATACAAACCCCCAGCTAACTGAAAGGTCTAGC
TCCTCCTCTGCATCGGCTCCCTCGGCTCCGTCTTCTCAATCATGATGACC
TCCCTCTGCAAAGAACTCTACCAATTCATCCTCGCGCAAGGCATCCTCCT
CGGCATCTCCCTATCCCTTCTCACCTGTCCCATGATCGCCCTCGTCGGCC
AACACATCAAGATCAAGCGCGGCGCAGCAGTCGGCATCGTCATCGGAGGA
TCCTCTCTCGGTGGTGTCCTCTGGCCGATCATCGTCAACGAACTGCTACA
GAAACCTAACATCGGGTTCGGATGGACCATGCGCATCGTCGGGTTTATTA
TGTTGCCGCTGCTTACAGTGACTTGTTTTTGTTGTCAGCCTGCTGCACCA
CCGCCATCACCATCACCATCCCAATATCAGCCAGAACCACAATCAGAGAA
ATCCTCACCCGAACCCCAATCCCCGGATCCCACTAAAGATACAGAAACCC
CCCTCCTCCAAAACCGCACCCTCCACCTAACCTGCCTCTCTTTCTTCATC
ATCTACTTCGGCATGTTCTCGCCCTTTTTCTACGTCTCTAGCTACGGGGT
AGCGCGGGGCTTTTCCTCCTCCTTGTCGTTCTACACCATATCCATGCTGA
ACGGCGCATCCCTCTTCGGGAGGGTCATTCCCGGTATACTAGCGGATAAA
TACGGACGGTTTAACGTCTGTATCGTCTTTACGATTCTCGCGGGGATAGT
TGCCCTCTGTTGGACGAAGGCGACGAGTGTGGCGGGGCTGGTGGTGTTTT
CGATAGCGTATGGGTTTTCTTCTGGTGTGAGTATAATTTTCCCTTCCTTG
TTTTATGCTCTTGGGGAAAGTGGGAAGAAGATGGCTAATAGTGTGGGTCT
GGGATAGGCTATTCTCTCTCTCCAGCAAGCGTGCGCGTTGCAGTTGGCGA
CGCCGAAGACGGTGGGGTTGGCGGTGGGGGTTGTTATGGGGGCTACGGCT
TTAAGGTATGCACATTATGATTTGTTTTAAATTGTGCTTCTTGGGGAGTA
AGGGTGGTTTTTGCTAATCATATCTTATCTGGGAGTGTAGTGCTATGGCT
GGGATACCTATTTCCGGGGCGCTGGTGCAGAAGTATGGGTTTCTGGCGCT
GTCGATATACGCCGGGGTGAGTCTGCTCGTGGGTGGGTTGTTGTTGTGTG
TGGCGAGGGGGGCGCAGAGTATGGAGTTGAGGGCTGTTGTTTAG
back to top

Coding sequence (CDS) from alignment at ch7:2034706..2036449+

>KJC3_009997-T2 ID=KJC3_009997-T2|Name=KJC3_009997-T2|organism=Aspergillus niger KJC3|type=CDS|length=4824bp|location=Sequence derived from alignment at ch7:2034706..2036449+ (Aspergillus niger KJC3)
ATGTTCTGCACTGTTGGCTTCGTGAACTCCTTCGGCCTATTCCTAGAGTA
CTACAAAAAGGACCAACTATCAGACCAACCCGAATCGACCATCGCATGGA
TAGCAGCCATCGACATCTTCTTCATTTTTGGTGTATCTGTCGTATCCGGG
CCTCTCCTGGACACGATCGGCCCACGACTCCTCCTCTGCATCGGCTCCCT
CGGCTCCGTCTTCTCAATCATGATGACCTCCCTCTGCAAAGAACTCTACC
AATTCATCCTCGCGCAAGGCATCCTCCTCGGCATCTCCCTATCCCTTCTC
ACCTGTCCCATGATCGCCCTCGTCGGCCAACACATCAAGATCAAGCGCGG
CGCAGCAGTCGGCATCGTCATCGGAGGATCCTCTCTCGGTGGTGTCCTCT
GGCCGATCATCGTCAACGAACTGCTACAGAAACCTAACATCGGGTTCGGA
TGGACCATGCGCATCGTCGGGTTTATTATGTTGCCGCTGCTTACAGTGAC
TTGTTTTTGTTGTCAGCCTGCTGCACCACCGCCATCACCATCACCATCCC
AATATCAGCCAGAACCACAATCAGAGAAATCCTCACCCGAACCCCAATCC
CCGGATCCCACTAAAGATACAGAAACCCCCCTCCTCCAAAACCGCACCCT
CCACCTAACCTGCCTCTCTTTCTTCATCATCTACTTCGGCATGTTCTCGC
CCTTTTTCTACGTCTCTAGCTACGGGGTAGCGCGGGGCTTTTCCTCCTCC
TTGTCGTTCTACACCATATCCATGCTGAACGGCGCATCCCTCTTCGGGAG
GGTCATTCCCGGTATACTAGCGGATAAATACGGACGGTTTAACGTCTGTA
TCGTCTTTACGATTCTCGCGGGGATAGTTGCCCTCTGTTGGACGAAGGCG
ACGAGTGTGGCGGGGCTGGTGGTGTTTTCGATAGCGTATGGGTTTTCTTC
TGGTGCTATTCTCTCTCTCCAGCAAGCGTGCGCGTTGCAGTTGGCGACGC
CGAAGACGGTGGGGTTGGCGGTGGGGGTTGTTATGGGGGCTACGGCTTTA
AGTGCTATGGCTGGGATACCTATTTCCGGGGCGCTGGTGCAGAAGTATGG
GTTTCTGGCGCTGTCGATATACGCCGGGGTGAGTCTGCTCGTGGGTGGGT
TGTTGTTGTGTGTGGCGAGGGGGGCGCAGAGTATGGAGTTGAGGGCTGTT
GTTTAGATGTTCTGCACTGTTGGCTTCGTGAACTCCTTCGGCCTATTCCT
AGAGTACTACAAAAAGGACCAACTATCAGACCAACCCGAATCGACCATCG
CATGGATAGCAGCCATCGACATCTTCTTCATTTTTGGTGTATCTGTCGTA
TCCGGGCCTCTCCTGGACACGATCGGCCCACGACTCCTCCTCTGCATCGG
CTCCCTCGGCTCCGTCTTCTCAATCATGATGACCTCCCTCTGCAAAGAAC
TCTACCAATTCATCCTCGCGCAAGGCATCCTCCTCGGCATCTCCCTATCC
CTTCTCACCTGTCCCATGATCGCCCTCGTCGGCCAACACATCAAGATCAA
GCGCGGCGCAGCAGTCGGCATCGTCATCGGAGGATCCTCTCTCGGTGGTG
TCCTCTGGCCGATCATCGTCAACGAACTGCTACAGAAACCTAACATCGGG
TTCGGATGGACCATGCGCATCGTCGGGTTTATTATGTTGCCGCTGCTTAC
AGTGACTTGTTTTTGTTGTCAGCCTGCTGCACCACCGCCATCACCATCAC
CATCCCAATATCAGCCAGAACCACAATCAGAGAAATCCTCACCCGAACCC
CAATCCCCGGATCCCACTAAAGATACAGAAACCCCCCTCCTCCAAAACCG
CACCCTCCACCTAACCTGCCTCTCTTTCTTCATCATCTACTTCGGCATGT
TCTCGCCCTTTTTCTACGTCTCTAGCTACGGGGTAGCGCGGGGCTTTTCC
TCCTCCTTGTCGTTCTACACCATATCCATGCTGAACGGCGCATCCCTCTT
CGGGAGGGTCATTCCCGGTATACTAGCGGATAAATACGGACGGTTTAACG
TCTGTATCGTCTTTACGATTCTCGCGGGGATAGTTGCCCTCTGTTGGACG
AAGGCGACGAGTGTGGCGGGGCTGGTGGTGTTTTCGATAGCGTATGGGTT
TTCTTCTGGTGCTATTCTCTCTCTCCAGCAAGCGTGCGCGTTGCAGTTGG
CGACGCCGAAGACGGTGGGGTTGGCGGTGGGGGTTGTTATGGGGGCTACG
GCTTTAAGTGCTATGGCTGGGATACCTATTTCCGGGGCGCTGGTGCAGAA
GTATGGGTTTCTGGCGCTGTCGATATACGCCGGGGTGAGTCTGCTCGTGG
GTGGGTTGTTGTTGTGTGTGGCGAGGGGGGCGCAGAGTATGGAGTTGAGG
GCTGTTGTTTAGATGTTCTGCACTGTTGGCTTCGTGAACTCCTTCGGCCT
ATTCCTAGAGTACTACAAAAAGGACCAACTATCAGACCAACCCGAATCGA
CCATCGCATGGATAGCAGCCATCGACATCTTCTTCATTTTTGGTGTATCT
GTCGTATCCGGGCCTCTCCTGGACACGATCGGCCCACGACTCCTCCTCTG
CATCGGCTCCCTCGGCTCCGTCTTCTCAATCATGATGACCTCCCTCTGCA
AAGAACTCTACCAATTCATCCTCGCGCAAGGCATCCTCCTCGGCATCTCC
CTATCCCTTCTCACCTGTCCCATGATCGCCCTCGTCGGCCAACACATCAA
GATCAAGCGCGGCGCAGCAGTCGGCATCGTCATCGGAGGATCCTCTCTCG
GTGGTGTCCTCTGGCCGATCATCGTCAACGAACTGCTACAGAAACCTAAC
ATCGGGTTCGGATGGACCATGCGCATCGTCGGGTTTATTATGTTGCCGCT
GCTTACAGTGACTTGTTTTTGTTGTCAGCCTGCTGCACCACCGCCATCAC
CATCACCATCCCAATATCAGCCAGAACCACAATCAGAGAAATCCTCACCC
GAACCCCAATCCCCGGATCCCACTAAAGATACAGAAACCCCCCTCCTCCA
AAACCGCACCCTCCACCTAACCTGCCTCTCTTTCTTCATCATCTACTTCG
GCATGTTCTCGCCCTTTTTCTACGTCTCTAGCTACGGGGTAGCGCGGGGC
TTTTCCTCCTCCTTGTCGTTCTACACCATATCCATGCTGAACGGCGCATC
CCTCTTCGGGAGGGTCATTCCCGGTATACTAGCGGATAAATACGGACGGT
TTAACGTCTGTATCGTCTTTACGATTCTCGCGGGGATAGTTGCCCTCTGT
TGGACGAAGGCGACGAGTGTGGCGGGGCTGGTGGTGTTTTCGATAGCGTA
TGGGTTTTCTTCTGGTGCTATTCTCTCTCTCCAGCAAGCGTGCGCGTTGC
AGTTGGCGACGCCGAAGACGGTGGGGTTGGCGGTGGGGGTTGTTATGGGG
GCTACGGCTTTAAGTGCTATGGCTGGGATACCTATTTCCGGGGCGCTGGT
GCAGAAGTATGGGTTTCTGGCGCTGTCGATATACGCCGGGGTGAGTCTGC
TCGTGGGTGGGTTGTTGTTGTGTGTGGCGAGGGGGGCGCAGAGTATGGAG
TTGAGGGCTGTTGTTTAGATGTTCTGCACTGTTGGCTTCGTGAACTCCTT
CGGCCTATTCCTAGAGTACTACAAAAAGGACCAACTATCAGACCAACCCG
AATCGACCATCGCATGGATAGCAGCCATCGACATCTTCTTCATTTTTGGT
GTATCTGTCGTATCCGGGCCTCTCCTGGACACGATCGGCCCACGACTCCT
CCTCTGCATCGGCTCCCTCGGCTCCGTCTTCTCAATCATGATGACCTCCC
TCTGCAAAGAACTCTACCAATTCATCCTCGCGCAAGGCATCCTCCTCGGC
ATCTCCCTATCCCTTCTCACCTGTCCCATGATCGCCCTCGTCGGCCAACA
CATCAAGATCAAGCGCGGCGCAGCAGTCGGCATCGTCATCGGAGGATCCT
CTCTCGGTGGTGTCCTCTGGCCGATCATCGTCAACGAACTGCTACAGAAA
CCTAACATCGGGTTCGGATGGACCATGCGCATCGTCGGGTTTATTATGTT
GCCGCTGCTTACAGTGACTTGTTTTTGTTGTCAGCCTGCTGCACCACCGC
CATCACCATCACCATCCCAATATCAGCCAGAACCACAATCAGAGAAATCC
TCACCCGAACCCCAATCCCCGGATCCCACTAAAGATACAGAAACCCCCCT
CCTCCAAAACCGCACCCTCCACCTAACCTGCCTCTCTTTCTTCATCATCT
ACTTCGGCATGTTCTCGCCCTTTTTCTACGTCTCTAGCTACGGGGTAGCG
CGGGGCTTTTCCTCCTCCTTGTCGTTCTACACCATATCCATGCTGAACGG
CGCATCCCTCTTCGGGAGGGTCATTCCCGGTATACTAGCGGATAAATACG
GACGGTTTAACGTCTGTATCGTCTTTACGATTCTCGCGGGGATAGTTGCC
CTCTGTTGGACGAAGGCGACGAGTGTGGCGGGGCTGGTGGTGTTTTCGAT
AGCGTATGGGTTTTCTTCTGGTGCTATTCTCTCTCTCCAGCAAGCGTGCG
CGTTGCAGTTGGCGACGCCGAAGACGGTGGGGTTGGCGGTGGGGGTTGTT
ATGGGGGCTACGGCTTTAAGTGCTATGGCTGGGATACCTATTTCCGGGGC
GCTGGTGCAGAAGTATGGGTTTCTGGCGCTGTCGATATACGCCGGGGTGA
GTCTGCTCGTGGGTGGGTTGTTGTTGTGTGTGGCGAGGGGGGCGCAGAGT
ATGGAGTTGAGGGCTGTTGTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009997KJC3_009997Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009997-T2KJC3_009997-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009997-T2.utr5p1KJC3_009997-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009997-T2.utr5p2KJC3_009997-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009997-T2.utr5p3KJC3_009997-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009997-T2.exon1KJC3_009997-T2.exon1Aspergillus niger KJC3exon
KJC3_009997-T2.exon2KJC3_009997-T2.exon2Aspergillus niger KJC3exon
KJC3_009997-T2.exon3KJC3_009997-T2.exon3Aspergillus niger KJC3exon
KJC3_009997-T2.exon4KJC3_009997-T2.exon4Aspergillus niger KJC3exon
KJC3_009997-T2.exon5KJC3_009997-T2.exon5Aspergillus niger KJC3exon
KJC3_009997-T2.exon6KJC3_009997-T2.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009997-T2.cdsKJC3_009997-T2.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2034706..2036449 +
Powered by Drupal