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KJC3_010008-T1, KJC3_010008-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010008-T1
Unique NameKJC3_010008-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2066076..2067015+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010008-T1 ID=KJC3_010008-T1|Name=KJC3_010008-T1|organism=Aspergillus niger KJC3|type=mRNA|length=940bp|location=Sequence derived from alignment at ch7:2066076..2067015+ (Aspergillus niger KJC3)
ATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACACCCCAGTCGAAAA
AGTAAACAACAAATATGGAGGCTATCGCGGCGTATTCTCACTCCTGCTGC
GTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTAGACCCAGAAACC
GGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCAAGAGTACCCCAA
CCTGGAGGATGTAGACGCAATTGTTTTGTCCGGGTCAAGTGAGTTAGCTA
CCTACCCTTCGTGCTCTTCCTTAATTCCCGCGCACCGTGCAGCATGCACT
TCCTCTGCAAGGCGCGCCCTGTGACTCACATTGTCTCCTAGAACACGATT
CCTTTGAGGACCACCCTTGGATCCTCAAGCTGGTTGAATTCACCAAAAAA
GCTTTCGAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCA
GATCCTGGCACGTGCGCTTGGCGCCAGAGTTGGTCGCAACACTGCAGGAT
GGGAACTTGCAGTGTGTGAGGTGGACTTGACTGAGACGGGGAAGGAGTTG
TTCGGGAGGGATAAGCTTGTATGTCTACCATCCTTCTCTCCGTCACCAGG
GCATGCATATAGCTTTTATGTGTATGGGTTCTATGCTGACAAAGTATGTT
TACAGCGCATTCATCAAATGCACCAGGATATTGCGTACGGGTACCCATCC
GAGGTCATCTCCCTGGGCGCTTCCCCGAGGTGTGCAGTACAGGGCATGTA
TGTCCCTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAATTCAGAGAAG
ACATCATGACCGAGATCCTTACTTTGCGGACTGCGGCTGGTATCTTCTCG
AAAGAACAATCAGAAGATGCCTTTAATCGCGCAGGCATCCCACACGACGG
CATTGCGATTACCATGGCCTTCTTGAAGCTTCTGATTTGA
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Coding sequence (CDS) from alignment at ch7:2066076..2067015+

>KJC3_010008-T1 ID=KJC3_010008-T1|Name=KJC3_010008-T1|organism=Aspergillus niger KJC3|type=CDS|length=2250bp|location=Sequence derived from alignment at ch7:2066076..2067015+ (Aspergillus niger KJC3)
ATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACACCCCAGTCGAAAA
AGTAAACAACAAATATGGAGGCTATCGCGGCGTATTCTCACTCCTGCTGC
GTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTAGACCCAGAAACC
GGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCAAGAGTACCCCAA
CCTGGAGGATGTAGACGCAATTGTTTTGTCCGGGTCAAAACACGATTCCT
TTGAGGACCACCCTTGGATCCTCAAGCTGGTTGAATTCACCAAAAAAGCT
TTCGAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCAGAT
CCTGGCACGTGCGCTTGGCGCCAGAGTTGGTCGCAACACTGCAGGATGGG
AACTTGCAGTGTGTGAGGTGGACTTGACTGAGACGGGGAAGGAGTTGTTC
GGGAGGGATAAGCTTCGCATTCATCAAATGCACCAGGATATTGCGTACGG
GTACCCATCCGAGGTCATCTCCCTGGGCGCTTCCCCGAGGTGTGCAGTAC
AGGGCATGTATGTCCCTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAA
TTCAGAGAAGACATCATGACCGAGATCCTTACTTTGCGGACTGCGGCTGG
TATCTTCTCGAAAGAACAATCAGAAGATGCCTTTAATCGCGCAGGCATCC
CACACGACGGCATTGCGATTACCATGGCCTTCTTGAAGCTTCTGATTTGA
ATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACACCCCAGTCGAAAA
AGTAAACAACAAATATGGAGGCTATCGCGGCGTATTCTCACTCCTGCTGC
GTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTAGACCCAGAAACC
GGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCAAGAGTACCCCAA
CCTGGAGGATGTAGACGCAATTGTTTTGTCCGGGTCAAAACACGATTCCT
TTGAGGACCACCCTTGGATCCTCAAGCTGGTTGAATTCACCAAAAAAGCT
TTCGAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCAGAT
CCTGGCACGTGCGCTTGGCGCCAGAGTTGGTCGCAACACTGCAGGATGGG
AACTTGCAGTGTGTGAGGTGGACTTGACTGAGACGGGGAAGGAGTTGTTC
GGGAGGGATAAGCTTCGCATTCATCAAATGCACCAGGATATTGCGTACGG
GTACCCATCCGAGGTCATCTCCCTGGGCGCTTCCCCGAGGTGTGCAGTAC
AGGGCATGTATGTCCCTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAA
TTCAGAGAAGACATCATGACCGAGATCCTTACTTTGCGGACTGCGGCTGG
TATCTTCTCGAAAGAACAATCAGAAGATGCCTTTAATCGCGCAGGCATCC
CACACGACGGCATTGCGATTACCATGGCCTTCTTGAAGCTTCTGATTTGA
ATGCCCCCGCTTCGTATCGCCATCCTTGAATGCGACACCCCAGTCGAAAA
AGTAAACAACAAATATGGAGGCTATCGCGGCGTATTCTCACTCCTGCTGC
GTGAAAGTGCTGCAGCACTAGGACAACCCGATAAGCTAGACCCAGAAACC
GGCCTCGAGTTTAGCGGCTGGGACGTGGTAACTGCGCAAGAGTACCCCAA
CCTGGAGGATGTAGACGCAATTGTTTTGTCCGGGTCAAAACACGATTCCT
TTGAGGACCACCCTTGGATCCTCAAGCTGGTTGAATTCACCAAAAAAGCT
TTCGAAGACAAGCGCGTTAAGATTTTCGCTATTTGCTTCGGCCATCAGAT
CCTGGCACGTGCGCTTGGCGCCAGAGTTGGTCGCAACACTGCAGGATGGG
AACTTGCAGTGTGTGAGGTGGACTTGACTGAGACGGGGAAGGAGTTGTTC
GGGAGGGATAAGCTTCGCATTCATCAAATGCACCAGGATATTGCGTACGG
GTACCCATCCGAGGTCATCTCCCTGGGCGCTTCCCCGAGGTGTGCAGTAC
AGGGCATGTATGTCCCTGGGAAGTTGATCTCTGTCCAGGGCCATCCGGAA
TTCAGAGAAGACATCATGACCGAGATCCTTACTTTGCGGACTGCGGCTGG
TATCTTCTCGAAAGAACAATCAGAAGATGCCTTTAATCGCGCAGGCATCC
CACACGACGGCATTGCGATTACCATGGCCTTCTTGAAGCTTCTGATTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010008KJC3_010008Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010008-T1.exon1KJC3_010008-T1.exon1Aspergillus niger KJC3exon
KJC3_010008-T1.exon2KJC3_010008-T1.exon2Aspergillus niger KJC3exon
KJC3_010008-T1.exon3KJC3_010008-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010008-T1.cdsKJC3_010008-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010008-T1KJC3_010008-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteMEROPS:MER0043475
DBxrefInterPro:IPR029062
DBxrefInterPro:IPR017926
DBxrefPFAM:PF00117
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2066076..2067015 +
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