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KJC3_010020-T1, KJC3_010020-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010020-T1
Unique NameKJC3_010020-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2096397..2097455-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010020-T1 ID=KJC3_010020-T1|Name=KJC3_010020-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1059bp|location=Sequence derived from alignment at ch7:2096397..2097455- (Aspergillus niger KJC3)
CCACTTGCTTGTTCCTCCTTCGTTCTCTTCGGTCAAATTCATCTCCATCC
ATCCCCGCTCACATCCCGTCTGGGGGTTCCGATTTTCGACTCTCTTGCTT
CTAGCGCACTTCCGAATATCCTGTTTCTACCTCCGCCTTACTGTCGCATC
ACCCTTATCACAACATGGTAAGTGGACATTGCCCCGCATCGCGCTCCCGC
TCCCTTTCCCCCCTGCTAACCTGGAGCCTCCGTCCATGCAGTCTGAATCA
CGACTATATTCCTTTTCCCCCGAGACCAAAGAAAAGCTTCGCAAGTTCCG
CTTGGGAACCTCCCGCGCTAAGGATCCGCAGGCCATCATTTGTAGGATCC
CGTCTCCTGTCGTTGCTACATAACCCCGCTCTCTTATCCTCTATCTATCA
CGAGCACAACCGTCACAGCTATCGCGCGAACTTGTTCGCTTCACATCGGA
TATCTCAGAACAATGGGTCGTTGACAACAGGGTTGGCAGATATCATCGAT
AGTAAGAGCCAGGAGATCAGACCTGAAGATGGCGAGGTTTACTCCAAGAT
GGAGGATCTAGCCGACGAGCTGCCCGAGTCGTCCCCTCGGTTTATCCTCC
TTAGCTATCCCCTTACCCTCGTGAGTATTTCGACAAGCCTTGTTTCATCT
AGACTTAGCGAGGAAGACCTAACTTGTGTTTGTTGTATTAGGCTTCCGGC
CGTCTCACCGTTCCTTACGTCATGCTCTACTACCTCCCCGTGAACTGCAA
CCCGAATTCGCGCATGATGTATGCGGGTGCTGTCGAGTTGATGCGCAATA
CGGCGGAGGTTAATCGGGTGATTGAGGTGCATGAGGAAGATGATATTATC
TCGATCGAGTCGAAGCTGCAAAACGCAGATTAGGGAGATTTTAGATTAAG
GATCGTTGGTCTGTCAAGCTGGTTTTAGGCCTTTCTATATTGGTCATTCA
TGACGCTATGCGTTTACTTCATAATTATAGTGCTGGCATTGTATACATGA
TCAGGTTAGATACGGATACAACAATGAGTTGCTAGACGATTTCTCAGTTC
CGAATGCAC
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Coding sequence (CDS) from alignment at ch7:2096397..2097455-

>KJC3_010020-T1 ID=KJC3_010020-T1|Name=KJC3_010020-T1|organism=Aspergillus niger KJC3|type=CDS|length=1704bp|location=Sequence derived from alignment at ch7:2096397..2097455- (Aspergillus niger KJC3)
GCTTCCGGCCGTCTCACCGTTCCTTACGTCATGCTCTACTACCTCCCCGT
GAACTGCAACCCGAATTCGCGCATGATGTATGCGGGTGCTGTCGAGTTGA
TGCGCAATACGGCGGAGGTTAATCGGGTGATTGAGGTGCATGAGGAAGAT
GATATTATCTCGATCGAGTCGAAGCTGCAAAACGCAGATTAGATATCATC
GATAGTAAGAGCCAGGAGATCAGACCTGAAGATGGCGAGGTTTACTCCAA
GATGGAGGATCTAGCCGACGAGCTGCCCGAGTCGTCCCCTCGGTTTATCC
TCCTTAGCTATCCCCTTACCCTCTCTGAATCACGACTATATTCCTTTTCC
CCCGAGACCAAAGAAAAGCTTCGCAAGTTCCGCTTGGGAACCTCCCGCGC
TAAGGATCCGCAGGCCATCATTTATGGCTTCCGGCCGTCTCACCGTTCCT
TACGTCATGCTCTACTACCTCCCCGTGAACTGCAACCCGAATTCGCGCAT
GATGTATGCGGGTGCTGTCGAGTTGATGCGCAATACGGCGGAGGTTAATC
GGGTGATTGAGGTGCATGAGGAAGATGATATTATCTCGATCGAGTCGAAG
CTGCAAAACGCAGATTAGATATCATCGATAGTAAGAGCCAGGAGATCAGA
CCTGAAGATGGCGAGGTTTACTCCAAGATGGAGGATCTAGCCGACGAGCT
GCCCGAGTCGTCCCCTCGGTTTATCCTCCTTAGCTATCCCCTTACCCTCT
CTGAATCACGACTATATTCCTTTTCCCCCGAGACCAAAGAAAAGCTTCGC
AAGTTCCGCTTGGGAACCTCCCGCGCTAAGGATCCGCAGGCCATCATTTA
TGGCTTCCGGCCGTCTCACCGTTCCTTACGTCATGCTCTACTACCTCCCC
GTGAACTGCAACCCGAATTCGCGCATGATGTATGCGGGTGCTGTCGAGTT
GATGCGCAATACGGCGGAGGTTAATCGGGTGATTGAGGTGCATGAGGAAG
ATGATATTATCTCGATCGAGTCGAAGCTGCAAAACGCAGATTAGATATCA
TCGATAGTAAGAGCCAGGAGATCAGACCTGAAGATGGCGAGGTTTACTCC
AAGATGGAGGATCTAGCCGACGAGCTGCCCGAGTCGTCCCCTCGGTTTAT
CCTCCTTAGCTATCCCCTTACCCTCTCTGAATCACGACTATATTCCTTTT
CCCCCGAGACCAAAGAAAAGCTTCGCAAGTTCCGCTTGGGAACCTCCCGC
GCTAAGGATCCGCAGGCCATCATTTATGGCTTCCGGCCGTCTCACCGTTC
CTTACGTCATGCTCTACTACCTCCCCGTGAACTGCAACCCGAATTCGCGC
ATGATGTATGCGGGTGCTGTCGAGTTGATGCGCAATACGGCGGAGGTTAA
TCGGGTGATTGAGGTGCATGAGGAAGATGATATTATCTCGATCGAGTCGA
AGCTGCAAAACGCAGATTAGATATCATCGATAGTAAGAGCCAGGAGATCA
GACCTGAAGATGGCGAGGTTTACTCCAAGATGGAGGATCTAGCCGACGAG
CTGCCCGAGTCGTCCCCTCGGTTTATCCTCCTTAGCTATCCCCTTACCCT
CTCTGAATCACGACTATATTCCTTTTCCCCCGAGACCAAAGAAAAGCTTC
GCAAGTTCCGCTTGGGAACCTCCCGCGCTAAGGATCCGCAGGCCATCATT
TATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0034316negative regulation of Arp2/3 complex-mediated actin nucleation
Vocabulary: Molecular Function
TermDefinition
GO:0071933Arp2/3 complex binding
GO:0003779actin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010020KJC3_010020Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010020-T1KJC3_010020-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010020-T1.cdsKJC3_010020-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010020-T1.utr3p1KJC3_010020-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010020-T1.exon4KJC3_010020-T1.exon4Aspergillus niger KJC3exon
KJC3_010020-T1.exon3KJC3_010020-T1.exon3Aspergillus niger KJC3exon
KJC3_010020-T1.exon2KJC3_010020-T1.exon2Aspergillus niger KJC3exon
KJC3_010020-T1.exon1KJC3_010020-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010020-T1.utr5p1KJC3_010020-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265I60
DBxrefInterPro:IPR029006
DBxrefInterPro:IPR011171
DBxrefInterPro:IPR002108
DBxrefPFAM:PF00241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2096397..2097455 -
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