|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2194977..2199331- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010052-T1 ID=KJC3_010052-T1|Name=KJC3_010052-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4355bp|location=Sequence derived from alignment at ch7:2194977..2199331- (Aspergillus niger KJC3)
AACCTCCCGGCCATCAACCACCCCCTGGCCTTCTTGCTTGGAGCCGTCGG
TTTTGTTTCCTCTCAAGCAGGATCTTCTCTTGATTCTTACCAGGAGGAGC
AGCCATCTAACGGCAGGCTGTGAGCTTCGTGCACAAGATTGCTTTGCGTG
GTATGGCCTGACTCCCTTAGCACCCTGCACATTCCTGCATGCTCAGCCCA
CTGACCTCAATTGGCATCGAATCCAGCTTTGATCCCGATATGTTATGCAT
CGCAGTCAAGTTTCGGTGAAATTCAGGGTTTGGCACCGCAATTTCTCGAG
GTAATGCTGGAACGGGCTGCCGGATGTCTTGAGAACGCGGGACGGCGTTT
CTTCCGGGATCCCAACGGCGCTGTTCGAGGTCGGGGTTCGATATATTCAA
CTCTTGGGCAATTCAGTAGCGCAGGGGCGGAGCTTTTGGTTTTCCTACAG
GCAACGCAAAGATCCGCGTCGAATACTTCAACCGCCACCTCGACAACCGG
AAGGACAGCCACGGACCCGCGGGCCCCCGTTCTCGACTTTCTCTATCCCC
CCCGCACACAGGAGTTTATAGCGACATGCTTGATACGTTCGCCGAGAAGG
CTTGTCCCGCGACGGAAAAGGAAGGCCGTCCCTGGCCTTTCCAGAAATTA
CTCGTCAGAGGCTGTTAGCCTAGACCGCAGGGTGGACGCTGAGGCTCACA
TGCTCGACGACTCTGCTGAAATAATTGCCGATGAAGACCGCGCCATTGCC
AAGAATGAACTTCGAGCGTTATTGGATAAGGAGGAGATCGAAGATTCCGA
TAAATTATGGAGCCTTTTTTCGAAGGCTGGTCACCCTCTTGACCTGACTT
CTGCATTGCTGGCGGGAATTGGCAGCTCTGAGCGTGACGTTGATAGCAGA
AGGGCCAGACGACTCCTCAACTCTCTGCCTACCGAGTCCCGAACTTCTGA
GGATTATTTGCACATGACCAAGTCTTGTATTGCCACGGGAAATTTTTCGG
ATGTAATTGGGATATGTCGCGAAGCAGTCTCCTGTGGCCGCGGCGTCTCA
TGCTGGGCATACTGTTTTGCACAATTTGTGAACTCTGAACGATGGGATTA
TGTGCAAGATATTTGGAGATCGAGGCCGTTGGGCGACAACTCACTATGGC
ACGCTGTCGCGCCTTGGCTACAGTTGTCTTCCGTGCATAAGCCTTTGTTT
GCACTTGCTGATTATTTACAAGATCAGAGTCTCCACAGTCCAGTACGTCA
TGCTACTCGCTTCATACTCAACAATGTATTTTCTAGCACGGAATTTGCCG
AAGCTACTGCGACGGAGACCCTACTAGCACTACTGCAAAAGTTCAATCAT
TTGGACATGGTCACTTCCCGGAATTATTTTGATCTTATCAACATCCTCCA
AGAATCAGAGCACCGATCGACGTTTGTTCGATCTATCGTGGTATATCGGA
ATTTCCGTTGGCAGATGGAAGAAGAAACTCCACCCCGAAAGCTTCTGGCT
AAGCTGTTGAAGCGTCTTGCTTCGTTCGAGATCACAACTGGTATCTTATA
CTTCCTCGATGAGATTTCCCAATTCCATCGCAAACCGACAGAGGACGTCT
ACAGGCAGGCGCTTATTGTTTTTTCGAGAGCCGGTGATGTGGATAACGTC
CAGCATGTATTCGAGAGGTTTCTTTCGGACCACGGGAAGCCGCGAAGCCG
CAAACTCGTGGCTCCGCTTCTCTATGTTTACGCCAGAATCGGCGATGTTG
AAAAGACTACGCGTCAATTCCGAAGAATTTCAGAAGAGTTCAACCTTCAA
CCAAATATTATATGTTGGAACATCCTGCTTACGGCTTATTCCAAAGCAGG
AGATCTTTCAGGGACCTTCGCCATGTTCAAGAAAATGATTGAGGAGGGTG
TTGAGCCCAGCTCGCACACTTTCGGTATAATGATGGGTCTTTGTGCTAAC
CGGGGCGATGTCACTCATGTCCGCGATTTGCTCAGCCTGGCCCAACAACA
TAACGTGCAGATAACCGCCCCCATGATTGATACAGTTGTGGAGGCTTATT
GCAACAACTCCGAGTGGGAGATGGCTGAGCACGTTGCGGAGACTTGCCTC
GGCCTCGACGTCAAGGGTTCTCGCGTAAGAATGTGGAATATCCTACTCTG
GAATTATGCTTTCCGGATGGACCTGGAAGCTATCTCAAGGATACGCTCGC
GGATGGATGCCGCAGGATTGGAGCCCGATGATATGACTTATTCTGCTCTC
ATGCTCAGTCTTGTGCTTATAGGCCAGACGGATTCTGCCCGTCGCATCCT
CAGGGCACTCCACAGAGGCCGCCGCGTTTACGCTACTGAATTCCACTACG
CAGTCATCCTGTATGGCTATCTGAAGGATCGCAATCGGGATATGGTGCAC
ATCATCTTCCGCGAAATTAAAGACAGATTCAACCAGCCGGGACTTGGCTC
GAGGCTCCTCGTGCTCAAGAGTCAGATCCAGCGAGATTTACAACTTTTGG
CACAGGGTGGTCAGGTCGGCAACCACGCAAATATTCGTCTCGAAAACTCT
GAGAAGTTCCTCGCAGAGACTCTTGCGGATTACCACTCTACCAAATTGGC
GACAAAGTACCCCTTGCTGGGTTCTGGTAGAATGTCTGCCAGGAAGGGAT
TCCCTGCTGTTTACTACGAATATATGATCTCTGCCTATGGTATGAAGGGG
GCTTATCTGTCGGCTCGGAGGCTTTTCGATGACTATACCGCAAGTCATGC
ACCTAAAGACTCCGACGAAGAAAATTACCATGATATCGCCCCTCTTCGTT
TGCTGTCTGCCTTGATGCTCGCACATTTGAAGGCTGAACAGTACCACCAG
GTGGAAGAATGCTGGAACTTGGCTTTCACCCGCGCTTTGAAGATAGCCAG
TCCCACTTCCCCTGATATTGATGAGTGGCTTAGCCGTCAACTTAACCCAG
TTACACCGCCCTTACCATCTCATGCCGAACTCGTGGTGAATCCCGATTCC
TCCCAGGCTACGTCAAGCGAGCCAGCTACGACAAAGAAAGACCCGATCCT
ACCGGCGTACCGCTTCATGCTATCTCGCCCGCTCTCACTGTATCTGCGTT
CTTTGGCTTATGGAAACGAAGTTTCGAAGATCTCCGAGGTTATAGCAAAG
TATGTGGAGGCAGGCTTCTCCATGACAACCTTCAATTGGTCCACATTTGT
GCAGATGCTTGCATCCTCCGACAGATTGTCCGATCAGATTGAAGCTTTCA
CTGTCTTTGAACATAAGTTCATGCCCAACTTCCCTGGGTGGGATAATCTT
CGTCGAGGATATGGGGCACGACCGCCGGGTGTGCCTTCAACCATTGATGC
GATGGAGAATCCCAAACGTGCAAAGCCGCCTAATGTACTGGGCAAACTGG
GCCGGCGCTACTGGAGCAAAATCCAGCCGGACTTCATGCAGCCCACGTAC
GTGTCCATGGTATATCTGGCTGCTGCATTGAGGCGACTTCGCGAACGAAG
CATCCACGAGGGAGGCACGGACCTTCAAGCTATCTACGATGCGGCGCCGA
AGACAATCGCAGCCGTTGCTAGACTGCCTTACCTCCGTGAGAAGTTCCAA
GGTGTGCTCCTCCGGCGTCGGCAGGAGAAAGGCGAGATGGTTGATGAACT
TGGACGCGATCGCTATGTATGGACAGGCGGTATTCTTGGCGTTGGCGGCC
TGACTAGGTCTAAGTCGCGGGTTGAGCCGACTGGTGATAAGGCGGAGCAA
GACAGCAGCAATGTTCGAGTCGAATCAAAGGACGCCTCTTCGAATCCAAT
TGATGAGCCTCCGCTCAACGTTGGTATCTCTGAGCTGGACGATGATGAGC
AAGATTCCGATGTTGCACCCTCGCCGTTCAGAAAGACCCTCGACTACCCC
GACGAATACGACATGGAGGCCGAGACGCTGCTTGAGGAAAGAGGCAAGGA
ACTCGGAACGAAAGAGGAATTGATGGACGATGAAAGTCTTGTGGAAGATG
ATGAAGATGAGTTCGACGATCTGGAGGAGGACCTGGAGATGGAAGAAGAA
GAAGAAAAAGAAGAAGAGGAAGAAGACTGGATAGCAGAGGAGGCAGAAGA
AGGAGAAGATACTCCTGATGCCGCCGAACAGGACATATATGACCCTCAAG
ACGAAGGGCAAATCCCTCAAGGCGAGGGTGAGACTCGTTGAGTTGAAAGT
GTATTTCTAGGATGTACCCCAAACGGGGTGGGATGTTCAAGTTGGGCGAG
TATGTATATATGTATAAAGAGATTTGTGAATGTATAGTAGTATAGTCAAA
GCATAGCATCTGATCATTATTGGAATTGTACACTATGGATGAAGATTTCT
GTGAC back to topCoding sequence (CDS) from alignment at ch7:2194977..2199331- >KJC3_010052-T1 ID=KJC3_010052-T1|Name=KJC3_010052-T1|organism=Aspergillus niger KJC3|type=CDS|length=3888bp|location=Sequence derived from alignment at ch7:2194977..2199331- (Aspergillus niger KJC3)
ATGCTGGAACGGGCTGCCGGATGTCTTGAGAACGCGGGACGGCGTTTCTT
CCGGGATCCCAACGGCGCTGTTCGAGGTCGGGGTTCGATATATTCAACTC
TTGGGCAATTCAGTAGCGCAGGGGCGGAGCTTTTGGTTTTCCTACAGGCA
ACGCAAAGATCCGCGTCGAATACTTCAACCGCCACCTCGACAACCGGAAG
GACAGCCACGGACCCGCGGGCCCCCGTTCTCGACTTTCTCTATCCCCCCC
GCACACAGGAGTTTATAGCGACATGCTTGATACGTTCGCCGAGAAGGCTT
GTCCCGCGACGGAAAAGGAAGGCCGTCCCTGGCCTTTCCAGAAATTACTC
GTCAGAGGCTGTTAGCCTAGACCGCAGGGTGGACGCTGAGGCTCACATGC
TCGACGACTCTGCTGAAATAATTGCCGATGAAGACCGCGCCATTGCCAAG
AATGAACTTCGAGCGTTATTGGATAAGGAGGAGATCGAAGATTCCGATAA
ATTATGGAGCCTTTTTTCGAAGGCTGGTCACCCTCTTGACCTGACTTCTG
CATTGCTGGCGGGAATTGGCAGCTCTGAGCGTGACGTTGATAGCAGAAGG
GCCAGACGACTCCTCAACTCTCTGCCTACCGAGTCCCGAACTTCTGAGGA
TTATTTGCACATGACCAAGTCTTGTATTGCCACGGGAAATTTTTCGGATG
TAATTGGGATATGTCGCGAAGCAGTCTCCTGTGGCCGCGGCGTCTCATGC
TGGGCATACTGTTTTGCACAATTTGTGAACTCTGAACGATGGGATTATGT
GCAAGATATTTGGAGATCGAGGCCGTTGGGCGACAACTCACTATGGCACG
CTGTCGCGCCTTGGCTACAGTTGTCTTCCGTGCATAAGCCTTTGTTTGCA
CTTGCTGATTATTTACAAGATCAGAGTCTCCACAGTCCAGTACGTCATGC
TACTCGCTTCATACTCAACAATGTATTTTCTAGCACGGAATTTGCCGAAG
CTACTGCGACGGAGACCCTACTAGCACTACTGCAAAAGTTCAATCATTTG
GACATGGTCACTTCCCGGAATTATTTTGATCTTATCAACATCCTCCAAGA
ATCAGAGCACCGATCGACGTTTGTTCGATCTATCGTGGTATATCGGAATT
TCCGTTGGCAGATGGAAGAAGAAACTCCACCCCGAAAGCTTCTGGCTAAG
CTGTTGAAGCGTCTTGCTTCGTTCGAGATCACAACTGGTATCTTATACTT
CCTCGATGAGATTTCCCAATTCCATCGCAAACCGACAGAGGACGTCTACA
GGCAGGCGCTTATTGTTTTTTCGAGAGCCGGTGATGTGGATAACGTCCAG
CATGTATTCGAGAGGTTTCTTTCGGACCACGGGAAGCCGCGAAGCCGCAA
ACTCGTGGCTCCGCTTCTCTATGTTTACGCCAGAATCGGCGATGTTGAAA
AGACTACGCGTCAATTCCGAAGAATTTCAGAAGAGTTCAACCTTCAACCA
AATATTATATGTTGGAACATCCTGCTTACGGCTTATTCCAAAGCAGGAGA
TCTTTCAGGGACCTTCGCCATGTTCAAGAAAATGATTGAGGAGGGTGTTG
AGCCCAGCTCGCACACTTTCGGTATAATGATGGGTCTTTGTGCTAACCGG
GGCGATGTCACTCATGTCCGCGATTTGCTCAGCCTGGCCCAACAACATAA
CGTGCAGATAACCGCCCCCATGATTGATACAGTTGTGGAGGCTTATTGCA
ACAACTCCGAGTGGGAGATGGCTGAGCACGTTGCGGAGACTTGCCTCGGC
CTCGACGTCAAGGGTTCTCGCGTAAGAATGTGGAATATCCTACTCTGGAA
TTATGCTTTCCGGATGGACCTGGAAGCTATCTCAAGGATACGCTCGCGGA
TGGATGCCGCAGGATTGGAGCCCGATGATATGACTTATTCTGCTCTCATG
CTCAGTCTTGTGCTTATAGGCCAGACGGATTCTGCCCGTCGCATCCTCAG
GGCACTCCACAGAGGCCGCCGCGTTTACGCTACTGAATTCCACTACGCAG
TCATCCTGTATGGCTATCTGAAGGATCGCAATCGGGATATGGTGCACATC
ATCTTCCGCGAAATTAAAGACAGATTCAACCAGCCGGGACTTGGCTCGAG
GCTCCTCGTGCTCAAGAGTCAGATCCAGCGAGATTTACAACTTTTGGCAC
AGGGTGGTCAGGTCGGCAACCACGCAAATATTCGTCTCGAAAACTCTGAG
AAGTTCCTCGCAGAGACTCTTGCGGATTACCACTCTACCAAATTGGCGAC
AAAGTACCCCTTGCTGGGTTCTGGTAGAATGTCTGCCAGGAAGGGATTCC
CTGCTGTTTACTACGAATATATGATCTCTGCCTATGGTATGAAGGGGGCT
TATCTGTCGGCTCGGAGGCTTTTCGATGACTATACCGCAAGTCATGCACC
TAAAGACTCCGACGAAGAAAATTACCATGATATCGCCCCTCTTCGTTTGC
TGTCTGCCTTGATGCTCGCACATTTGAAGGCTGAACAGTACCACCAGGTG
GAAGAATGCTGGAACTTGGCTTTCACCCGCGCTTTGAAGATAGCCAGTCC
CACTTCCCCTGATATTGATGAGTGGCTTAGCCGTCAACTTAACCCAGTTA
CACCGCCCTTACCATCTCATGCCGAACTCGTGGTGAATCCCGATTCCTCC
CAGGCTACGTCAAGCGAGCCAGCTACGACAAAGAAAGACCCGATCCTACC
GGCGTACCGCTTCATGCTATCTCGCCCGCTCTCACTGTATCTGCGTTCTT
TGGCTTATGGAAACGAAGTTTCGAAGATCTCCGAGGTTATAGCAAAGTAT
GTGGAGGCAGGCTTCTCCATGACAACCTTCAATTGGTCCACATTTGTGCA
GATGCTTGCATCCTCCGACAGATTGTCCGATCAGATTGAAGCTTTCACTG
TCTTTGAACATAAGTTCATGCCCAACTTCCCTGGGTGGGATAATCTTCGT
CGAGGATATGGGGCACGACCGCCGGGTGTGCCTTCAACCATTGATGCGAT
GGAGAATCCCAAACGTGCAAAGCCGCCTAATGTACTGGGCAAACTGGGCC
GGCGCTACTGGAGCAAAATCCAGCCGGACTTCATGCAGCCCACGTACGTG
TCCATGGTATATCTGGCTGCTGCATTGAGGCGACTTCGCGAACGAAGCAT
CCACGAGGGAGGCACGGACCTTCAAGCTATCTACGATGCGGCGCCGAAGA
CAATCGCAGCCGTTGCTAGACTGCCTTACCTCCGTGAGAAGTTCCAAGGT
GTGCTCCTCCGGCGTCGGCAGGAGAAAGGCGAGATGGTTGATGAACTTGG
ACGCGATCGCTATGTATGGACAGGCGGTATTCTTGGCGTTGGCGGCCTGA
CTAGGTCTAAGTCGCGGGTTGAGCCGACTGGTGATAAGGCGGAGCAAGAC
AGCAGCAATGTTCGAGTCGAATCAAAGGACGCCTCTTCGAATCCAATTGA
TGAGCCTCCGCTCAACGTTGGTATCTCTGAGCTGGACGATGATGAGCAAG
ATTCCGATGTTGCACCCTCGCCGTTCAGAAAGACCCTCGACTACCCCGAC
GAATACGACATGGAGGCCGAGACGCTGCTTGAGGAAAGAGGCAAGGAACT
CGGAACGAAAGAGGAATTGATGGACGATGAAAGTCTTGTGGAAGATGATG
AAGATGAGTTCGACGATCTGGAGGAGGACCTGGAGATGGAAGAAGAAGAA
GAAAAAGAAGAAGAGGAAGAAGACTGGATAGCAGAGGAGGCAGAAGAAGG
AGAAGATACTCCTGATGCCGCCGAACAGGACATATATGACCCTCAAGACG
AAGGGCAAATCCCTCAAGGCGAGGGTGAGACTCGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010052-T1.utr3p1 | KJC3_010052-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR002885 |
| DBxref | PFAM:PF17177 |
| DBxref | PFAM:PF13812 |
| DBxref | PFAM:PF13041 |
| DBxref | PFAM:PF01535 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2194977..2199331 - |
|
