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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2221058..2222421+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010059-T1 ID=KJC3_010059-T1|Name=KJC3_010059-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1364bp|location=Sequence derived from alignment at ch7:2221058..2222421+ (Aspergillus niger KJC3) CCAGGAACCGAGAGCTCAACAACCACCTTTGAAAACGAACGTGAGCTGCC
CAAAATGGCGAACCAGGGCTACGACGTGGTAGTGGACGTTGACGCCGAGG
TAAGACCCCGTCAACAGTCCGCATCTGTAACCATAGTCTACTAACAGCAA
TTTCCAGGGCGATCTCGGCCATACCGACCTCCAAGAAGACCTCGAATTCC
ACCGTTCCAGTAAGCTAGCTGGCCTTGAGTACCAACACCTCATCCCAATG
CACACCTACTTACCTCCATTATCTCAGACTTCGAAAATGACCAACGCAAT
GCCAAGGCCCAACAAGACTCGGCCCCCTTCCTCGGCGGCGGTTCATCGCG
CGGCCGTGACCGATCCCCCGGCGGCACACCCTCCAAGCTCAACTGGTGGT
CGATCCACTACTACTCGCAATTCTTCGACGTAGACACGAACGAAGTCCTC
CGCCGCTGCGTCGCAGCTCTTTACCCGCGCAGCAACTTCCTCGACGTCCT
AGAAGGCAACCCAGACCTCTACGGCCCCTTCTGGATCGCAACCACCGTCG
TCGTCATCCTCTTCCTGACCGGCACCATCTCGCAATGGCTCTCCAACAAT
GACGACGAGCACTTCGAATACGACTTCACTTTGCTATCCGGCGCCGCGGG
CTTGGTTTACGGATACACGGGCATCATCCCCATTGCGCTGTGGGGTGCGC
TGAAGTGGTTTGGCAGCTCCAGCGCGGACTTGGTTGAGTCGTGGGCGCTC
TATGGATACTCGAACCTGGTTTGGATTGCCGTCGCCCTTGTCAGCTGGAG
CCCTTTGACGGCGTTGAACTGGGCTCTGGTGGGTGTTGGGTTCGGGTGGA
CTGTCTTCTTCCTCCTGCGCAATCTGTACCCGGTTTTGAGTGCTACGGAT
GCGAAGGCTAGTAAGATCTTGCTGATTCTGGTCATTGTGCTGCATGCTGG
GTTTGCGTTGGCTATTAAGATCTTGTTCTTTGCGTAAGTGGTTCCCTACT
ATTCTCCCTTCCGGTGTGATTATCTTACTGTGAGGGGTTCTGACTAACGT
GATAATTTATGCAGACATGGAAGCCCTGTTTCGAAGAAGAACAAGGACCA
TGATGACGACGATGATCACGACGACGACAAGCGACGGATGTTCGGTGGTT
GGTAGAAAAGAAAAGGTGCTAGATGTCGGTGTTGGTATCGGTGTCGTTTC
CGGATGTTATACTGTTCAGTTGCTGTCTTTCCCCTCACATGGGACCATGA
CATTGCTCCGGCAGCATTATGTCATGTCATGTCTCGACTTGCTGGTTTAT
GTTCTCAAGTGTTGTTATCTCTGATATCGTTTCCACCGTTTTGTCTGTTG
AACGTTTTTCCTCT back to topCoding sequence (CDS) from alignment at ch7:2221058..2222421+ >KJC3_010059-T1 ID=KJC3_010059-T1|Name=KJC3_010059-T1|organism=Aspergillus niger KJC3|type=CDS|length=3576bp|location=Sequence derived from alignment at ch7:2221058..2222421+ (Aspergillus niger KJC3) ATGGCGAACCAGGGCTACGACGTGGTAGTGGACGTTGACGCCGAGGGCGA TCTCGGCCATACCGACCTCCAAGAAGACCTCGAATTCCACCGTTCCAACT TCGAAAATGACCAACGCAATGCCAAGGCCCAACAAGACTCGGCCCCCTTC CTCGGCGGCGGTTCATCGCGCGGCCGTGACCGATCCCCCGGCGGCACACC CTCCAAGCTCAACTGGTGGTCGATCCACTACTACTCGCAATTCTTCGACG TAGACACGAACGAAGTCCTCCGCCGCTGCGTCGCAGCTCTTTACCCGCGC AGCAACTTCCTCGACGTCCTAGAAGGCAACCCAGACCTCTACGGCCCCTT CTGGATCGCAACCACCGTCGTCGTCATCCTCTTCCTGACCGGCACCATCT CGCAATGGCTCTCCAACAATGACGACGAGCACTTCGAATACGACTTCACT TTGCTATCCGGCGCCGCGGGCTTGGTTTACGGATACACGGGCATCATCCC CATTGCGCTGTGGGGTGCGCTGAAGTGGTTTGGCAGCTCCAGCGCGGACT TGGTTGAGTCGTGGGCGCTCTATGGATACTCGAACCTGGTTTGGATTGCC GTCGCCCTTGTCAGCTGGAGCCCTTTGACGGCGTTGAACTGGGCTCTGGT GGGTGTTGGGTTCGGGTGGACTGTCTTCTTCCTCCTGCGCAATCTGTACC CGGTTTTGAGTGCTACGGATGCGAAGGCTAGTAAGATCTTGCTGATTCTG GTCATTGTGCTGCATGCTGGGTTTGCGTTGGCTATTAAGATCTTGTTCTT TGCACATGGAAGCCCTGTTTCGAAGAAGAACAAGGACCATGATGACGACG ATGATCACGACGACGACAAGCGACGGATGTTCGGTGGTTGGTAGATGGCG AACCAGGGCTACGACGTGGTAGTGGACGTTGACGCCGAGGGCGATCTCGG CCATACCGACCTCCAAGAAGACCTCGAATTCCACCGTTCCAACTTCGAAA ATGACCAACGCAATGCCAAGGCCCAACAAGACTCGGCCCCCTTCCTCGGC GGCGGTTCATCGCGCGGCCGTGACCGATCCCCCGGCGGCACACCCTCCAA GCTCAACTGGTGGTCGATCCACTACTACTCGCAATTCTTCGACGTAGACA CGAACGAAGTCCTCCGCCGCTGCGTCGCAGCTCTTTACCCGCGCAGCAAC TTCCTCGACGTCCTAGAAGGCAACCCAGACCTCTACGGCCCCTTCTGGAT CGCAACCACCGTCGTCGTCATCCTCTTCCTGACCGGCACCATCTCGCAAT GGCTCTCCAACAATGACGACGAGCACTTCGAATACGACTTCACTTTGCTA TCCGGCGCCGCGGGCTTGGTTTACGGATACACGGGCATCATCCCCATTGC GCTGTGGGGTGCGCTGAAGTGGTTTGGCAGCTCCAGCGCGGACTTGGTTG AGTCGTGGGCGCTCTATGGATACTCGAACCTGGTTTGGATTGCCGTCGCC CTTGTCAGCTGGAGCCCTTTGACGGCGTTGAACTGGGCTCTGGTGGGTGT TGGGTTCGGGTGGACTGTCTTCTTCCTCCTGCGCAATCTGTACCCGGTTT TGAGTGCTACGGATGCGAAGGCTAGTAAGATCTTGCTGATTCTGGTCATT GTGCTGCATGCTGGGTTTGCGTTGGCTATTAAGATCTTGTTCTTTGCACA TGGAAGCCCTGTTTCGAAGAAGAACAAGGACCATGATGACGACGATGATC ACGACGACGACAAGCGACGGATGTTCGGTGGTTGGTAGATGGCGAACCAG GGCTACGACGTGGTAGTGGACGTTGACGCCGAGGGCGATCTCGGCCATAC CGACCTCCAAGAAGACCTCGAATTCCACCGTTCCAACTTCGAAAATGACC AACGCAATGCCAAGGCCCAACAAGACTCGGCCCCCTTCCTCGGCGGCGGT TCATCGCGCGGCCGTGACCGATCCCCCGGCGGCACACCCTCCAAGCTCAA CTGGTGGTCGATCCACTACTACTCGCAATTCTTCGACGTAGACACGAACG AAGTCCTCCGCCGCTGCGTCGCAGCTCTTTACCCGCGCAGCAACTTCCTC GACGTCCTAGAAGGCAACCCAGACCTCTACGGCCCCTTCTGGATCGCAAC CACCGTCGTCGTCATCCTCTTCCTGACCGGCACCATCTCGCAATGGCTCT CCAACAATGACGACGAGCACTTCGAATACGACTTCACTTTGCTATCCGGC GCCGCGGGCTTGGTTTACGGATACACGGGCATCATCCCCATTGCGCTGTG GGGTGCGCTGAAGTGGTTTGGCAGCTCCAGCGCGGACTTGGTTGAGTCGT GGGCGCTCTATGGATACTCGAACCTGGTTTGGATTGCCGTCGCCCTTGTC AGCTGGAGCCCTTTGACGGCGTTGAACTGGGCTCTGGTGGGTGTTGGGTT CGGGTGGACTGTCTTCTTCCTCCTGCGCAATCTGTACCCGGTTTTGAGTG CTACGGATGCGAAGGCTAGTAAGATCTTGCTGATTCTGGTCATTGTGCTG CATGCTGGGTTTGCGTTGGCTATTAAGATCTTGTTCTTTGCACATGGAAG CCCTGTTTCGAAGAAGAACAAGGACCATGATGACGACGATGATCACGACG ACGACAAGCGACGGATGTTCGGTGGTTGGTAGATGGCGAACCAGGGCTAC GACGTGGTAGTGGACGTTGACGCCGAGGGCGATCTCGGCCATACCGACCT CCAAGAAGACCTCGAATTCCACCGTTCCAACTTCGAAAATGACCAACGCA ATGCCAAGGCCCAACAAGACTCGGCCCCCTTCCTCGGCGGCGGTTCATCG CGCGGCCGTGACCGATCCCCCGGCGGCACACCCTCCAAGCTCAACTGGTG GTCGATCCACTACTACTCGCAATTCTTCGACGTAGACACGAACGAAGTCC TCCGCCGCTGCGTCGCAGCTCTTTACCCGCGCAGCAACTTCCTCGACGTC CTAGAAGGCAACCCAGACCTCTACGGCCCCTTCTGGATCGCAACCACCGT CGTCGTCATCCTCTTCCTGACCGGCACCATCTCGCAATGGCTCTCCAACA ATGACGACGAGCACTTCGAATACGACTTCACTTTGCTATCCGGCGCCGCG GGCTTGGTTTACGGATACACGGGCATCATCCCCATTGCGCTGTGGGGTGC GCTGAAGTGGTTTGGCAGCTCCAGCGCGGACTTGGTTGAGTCGTGGGCGC TCTATGGATACTCGAACCTGGTTTGGATTGCCGTCGCCCTTGTCAGCTGG AGCCCTTTGACGGCGTTGAACTGGGCTCTGGTGGGTGTTGGGTTCGGGTG GACTGTCTTCTTCCTCCTGCGCAATCTGTACCCGGTTTTGAGTGCTACGG ATGCGAAGGCTAGTAAGATCTTGCTGATTCTGGTCATTGTGCTGCATGCT GGGTTTGCGTTGGCTATTAAGATCTTGTTCTTTGCACATGGAAGCCCTGT TTCGAAGAAGAACAAGGACCATGATGACGACGATGATCACGACGACGACA AGCGACGGATGTTCGGTGGTTGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_010059-T1.utr5p1 | KJC3_010059-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_010059-T1.utr3p1 | KJC3_010059-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR006977 |
DBxref | PFAM:PF04893 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:2221058..2222421 + |
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