You are here

KJC3_010059-T1, KJC3_010059-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010059-T1
Unique NameKJC3_010059-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2221058..2222421+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010059-T1 ID=KJC3_010059-T1|Name=KJC3_010059-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1364bp|location=Sequence derived from alignment at ch7:2221058..2222421+ (Aspergillus niger KJC3)
CCAGGAACCGAGAGCTCAACAACCACCTTTGAAAACGAACGTGAGCTGCC CAAAATGGCGAACCAGGGCTACGACGTGGTAGTGGACGTTGACGCCGAGG TAAGACCCCGTCAACAGTCCGCATCTGTAACCATAGTCTACTAACAGCAA TTTCCAGGGCGATCTCGGCCATACCGACCTCCAAGAAGACCTCGAATTCC ACCGTTCCAGTAAGCTAGCTGGCCTTGAGTACCAACACCTCATCCCAATG CACACCTACTTACCTCCATTATCTCAGACTTCGAAAATGACCAACGCAAT GCCAAGGCCCAACAAGACTCGGCCCCCTTCCTCGGCGGCGGTTCATCGCG CGGCCGTGACCGATCCCCCGGCGGCACACCCTCCAAGCTCAACTGGTGGT CGATCCACTACTACTCGCAATTCTTCGACGTAGACACGAACGAAGTCCTC CGCCGCTGCGTCGCAGCTCTTTACCCGCGCAGCAACTTCCTCGACGTCCT AGAAGGCAACCCAGACCTCTACGGCCCCTTCTGGATCGCAACCACCGTCG TCGTCATCCTCTTCCTGACCGGCACCATCTCGCAATGGCTCTCCAACAAT GACGACGAGCACTTCGAATACGACTTCACTTTGCTATCCGGCGCCGCGGG CTTGGTTTACGGATACACGGGCATCATCCCCATTGCGCTGTGGGGTGCGC TGAAGTGGTTTGGCAGCTCCAGCGCGGACTTGGTTGAGTCGTGGGCGCTC TATGGATACTCGAACCTGGTTTGGATTGCCGTCGCCCTTGTCAGCTGGAG CCCTTTGACGGCGTTGAACTGGGCTCTGGTGGGTGTTGGGTTCGGGTGGA CTGTCTTCTTCCTCCTGCGCAATCTGTACCCGGTTTTGAGTGCTACGGAT GCGAAGGCTAGTAAGATCTTGCTGATTCTGGTCATTGTGCTGCATGCTGG GTTTGCGTTGGCTATTAAGATCTTGTTCTTTGCGTAAGTGGTTCCCTACT ATTCTCCCTTCCGGTGTGATTATCTTACTGTGAGGGGTTCTGACTAACGT GATAATTTATGCAGACATGGAAGCCCTGTTTCGAAGAAGAACAAGGACCA TGATGACGACGATGATCACGACGACGACAAGCGACGGATGTTCGGTGGTT GGTAGAAAAGAAAAGGTGCTAGATGTCGGTGTTGGTATCGGTGTCGTTTC CGGATGTTATACTGTTCAGTTGCTGTCTTTCCCCTCACATGGGACCATGA CATTGCTCCGGCAGCATTATGTCATGTCATGTCTCGACTTGCTGGTTTAT GTTCTCAAGTGTTGTTATCTCTGATATCGTTTCCACCGTTTTGTCTGTTG AACGTTTTTCCTCT
back to top

Coding sequence (CDS) from alignment at ch7:2221058..2222421+

>KJC3_010059-T1 ID=KJC3_010059-T1|Name=KJC3_010059-T1|organism=Aspergillus niger KJC3|type=CDS|length=3576bp|location=Sequence derived from alignment at ch7:2221058..2222421+ (Aspergillus niger KJC3)
ATGGCGAACCAGGGCTACGACGTGGTAGTGGACGTTGACGCCGAGGGCGA
TCTCGGCCATACCGACCTCCAAGAAGACCTCGAATTCCACCGTTCCAACT
TCGAAAATGACCAACGCAATGCCAAGGCCCAACAAGACTCGGCCCCCTTC
CTCGGCGGCGGTTCATCGCGCGGCCGTGACCGATCCCCCGGCGGCACACC
CTCCAAGCTCAACTGGTGGTCGATCCACTACTACTCGCAATTCTTCGACG
TAGACACGAACGAAGTCCTCCGCCGCTGCGTCGCAGCTCTTTACCCGCGC
AGCAACTTCCTCGACGTCCTAGAAGGCAACCCAGACCTCTACGGCCCCTT
CTGGATCGCAACCACCGTCGTCGTCATCCTCTTCCTGACCGGCACCATCT
CGCAATGGCTCTCCAACAATGACGACGAGCACTTCGAATACGACTTCACT
TTGCTATCCGGCGCCGCGGGCTTGGTTTACGGATACACGGGCATCATCCC
CATTGCGCTGTGGGGTGCGCTGAAGTGGTTTGGCAGCTCCAGCGCGGACT
TGGTTGAGTCGTGGGCGCTCTATGGATACTCGAACCTGGTTTGGATTGCC
GTCGCCCTTGTCAGCTGGAGCCCTTTGACGGCGTTGAACTGGGCTCTGGT
GGGTGTTGGGTTCGGGTGGACTGTCTTCTTCCTCCTGCGCAATCTGTACC
CGGTTTTGAGTGCTACGGATGCGAAGGCTAGTAAGATCTTGCTGATTCTG
GTCATTGTGCTGCATGCTGGGTTTGCGTTGGCTATTAAGATCTTGTTCTT
TGCACATGGAAGCCCTGTTTCGAAGAAGAACAAGGACCATGATGACGACG
ATGATCACGACGACGACAAGCGACGGATGTTCGGTGGTTGGTAGATGGCG
AACCAGGGCTACGACGTGGTAGTGGACGTTGACGCCGAGGGCGATCTCGG
CCATACCGACCTCCAAGAAGACCTCGAATTCCACCGTTCCAACTTCGAAA
ATGACCAACGCAATGCCAAGGCCCAACAAGACTCGGCCCCCTTCCTCGGC
GGCGGTTCATCGCGCGGCCGTGACCGATCCCCCGGCGGCACACCCTCCAA
GCTCAACTGGTGGTCGATCCACTACTACTCGCAATTCTTCGACGTAGACA
CGAACGAAGTCCTCCGCCGCTGCGTCGCAGCTCTTTACCCGCGCAGCAAC
TTCCTCGACGTCCTAGAAGGCAACCCAGACCTCTACGGCCCCTTCTGGAT
CGCAACCACCGTCGTCGTCATCCTCTTCCTGACCGGCACCATCTCGCAAT
GGCTCTCCAACAATGACGACGAGCACTTCGAATACGACTTCACTTTGCTA
TCCGGCGCCGCGGGCTTGGTTTACGGATACACGGGCATCATCCCCATTGC
GCTGTGGGGTGCGCTGAAGTGGTTTGGCAGCTCCAGCGCGGACTTGGTTG
AGTCGTGGGCGCTCTATGGATACTCGAACCTGGTTTGGATTGCCGTCGCC
CTTGTCAGCTGGAGCCCTTTGACGGCGTTGAACTGGGCTCTGGTGGGTGT
TGGGTTCGGGTGGACTGTCTTCTTCCTCCTGCGCAATCTGTACCCGGTTT
TGAGTGCTACGGATGCGAAGGCTAGTAAGATCTTGCTGATTCTGGTCATT
GTGCTGCATGCTGGGTTTGCGTTGGCTATTAAGATCTTGTTCTTTGCACA
TGGAAGCCCTGTTTCGAAGAAGAACAAGGACCATGATGACGACGATGATC
ACGACGACGACAAGCGACGGATGTTCGGTGGTTGGTAGATGGCGAACCAG
GGCTACGACGTGGTAGTGGACGTTGACGCCGAGGGCGATCTCGGCCATAC
CGACCTCCAAGAAGACCTCGAATTCCACCGTTCCAACTTCGAAAATGACC
AACGCAATGCCAAGGCCCAACAAGACTCGGCCCCCTTCCTCGGCGGCGGT
TCATCGCGCGGCCGTGACCGATCCCCCGGCGGCACACCCTCCAAGCTCAA
CTGGTGGTCGATCCACTACTACTCGCAATTCTTCGACGTAGACACGAACG
AAGTCCTCCGCCGCTGCGTCGCAGCTCTTTACCCGCGCAGCAACTTCCTC
GACGTCCTAGAAGGCAACCCAGACCTCTACGGCCCCTTCTGGATCGCAAC
CACCGTCGTCGTCATCCTCTTCCTGACCGGCACCATCTCGCAATGGCTCT
CCAACAATGACGACGAGCACTTCGAATACGACTTCACTTTGCTATCCGGC
GCCGCGGGCTTGGTTTACGGATACACGGGCATCATCCCCATTGCGCTGTG
GGGTGCGCTGAAGTGGTTTGGCAGCTCCAGCGCGGACTTGGTTGAGTCGT
GGGCGCTCTATGGATACTCGAACCTGGTTTGGATTGCCGTCGCCCTTGTC
AGCTGGAGCCCTTTGACGGCGTTGAACTGGGCTCTGGTGGGTGTTGGGTT
CGGGTGGACTGTCTTCTTCCTCCTGCGCAATCTGTACCCGGTTTTGAGTG
CTACGGATGCGAAGGCTAGTAAGATCTTGCTGATTCTGGTCATTGTGCTG
CATGCTGGGTTTGCGTTGGCTATTAAGATCTTGTTCTTTGCACATGGAAG
CCCTGTTTCGAAGAAGAACAAGGACCATGATGACGACGATGATCACGACG
ACGACAAGCGACGGATGTTCGGTGGTTGGTAGATGGCGAACCAGGGCTAC
GACGTGGTAGTGGACGTTGACGCCGAGGGCGATCTCGGCCATACCGACCT
CCAAGAAGACCTCGAATTCCACCGTTCCAACTTCGAAAATGACCAACGCA
ATGCCAAGGCCCAACAAGACTCGGCCCCCTTCCTCGGCGGCGGTTCATCG
CGCGGCCGTGACCGATCCCCCGGCGGCACACCCTCCAAGCTCAACTGGTG
GTCGATCCACTACTACTCGCAATTCTTCGACGTAGACACGAACGAAGTCC
TCCGCCGCTGCGTCGCAGCTCTTTACCCGCGCAGCAACTTCCTCGACGTC
CTAGAAGGCAACCCAGACCTCTACGGCCCCTTCTGGATCGCAACCACCGT
CGTCGTCATCCTCTTCCTGACCGGCACCATCTCGCAATGGCTCTCCAACA
ATGACGACGAGCACTTCGAATACGACTTCACTTTGCTATCCGGCGCCGCG
GGCTTGGTTTACGGATACACGGGCATCATCCCCATTGCGCTGTGGGGTGC
GCTGAAGTGGTTTGGCAGCTCCAGCGCGGACTTGGTTGAGTCGTGGGCGC
TCTATGGATACTCGAACCTGGTTTGGATTGCCGTCGCCCTTGTCAGCTGG
AGCCCTTTGACGGCGTTGAACTGGGCTCTGGTGGGTGTTGGGTTCGGGTG
GACTGTCTTCTTCCTCCTGCGCAATCTGTACCCGGTTTTGAGTGCTACGG
ATGCGAAGGCTAGTAAGATCTTGCTGATTCTGGTCATTGTGCTGCATGCT
GGGTTTGCGTTGGCTATTAAGATCTTGTTCTTTGCACATGGAAGCCCTGT
TTCGAAGAAGAACAAGGACCATGATGACGACGATGATCACGACGACGACA
AGCGACGGATGTTCGGTGGTTGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010059KJC3_010059Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010059-T1KJC3_010059-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010059-T1.utr5p1KJC3_010059-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010059-T1.exon1KJC3_010059-T1.exon1Aspergillus niger KJC3exon
KJC3_010059-T1.exon2KJC3_010059-T1.exon2Aspergillus niger KJC3exon
KJC3_010059-T1.exon3KJC3_010059-T1.exon3Aspergillus niger KJC3exon
KJC3_010059-T1.exon4KJC3_010059-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010059-T1.cdsKJC3_010059-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010059-T1.utr3p1KJC3_010059-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006977
DBxrefPFAM:PF04893
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2221058..2222421 +