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KJC3_010073-T1, KJC3_010073-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010073-T1
Unique NameKJC3_010073-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2255183..2256521-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010073-T1 ID=KJC3_010073-T1|Name=KJC3_010073-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1339bp|location=Sequence derived from alignment at ch7:2255183..2256521- (Aspergillus niger KJC3)
CGAGCGCCCTCTTAATCCTGCCCTCTGGCCGATACTACGTTGATCCCCGA
GCGGAGCCGGTCAATCTACTGCATACTTTACTGCGTCACTCCTCGTTCAA
ACTATTAACCGGTCAACAATGGCGCCTGCAAAGCCGAACAAAGTGTCTCG
CATTACAGTGGCTTGTAATTCCTGCCGGTTTCGGAAACAGAAGGTGAGAT
TATACCTGATCCTCGTGATTCTTCCCATCTAACAGTCTATGTGTTTCTAG
TGCAGTGGGAATAAGTAAGTAGGAGGTCCCTCGTTCTTACTTCAGACTTT
TACTCATGCAATCCAATTTGCAAGGCCAATTTGTACTCAATGCGACCAGC
ACAATCGGCCGTGCGACTGGCCCGAACAGTTGAAACGGTAAGCTACGCCA
ACTGCTGAAATTTGAAGTGTATCAACCTTATACCTCTTAGTGGCCCGGCA
AAAGGTTATATAGAAGCCTTGGAGCATCGTCTCCATGAAACAGAAAGTCT
GCTTCTGAATCTACTCGCCCAAATCCCAGATTCTCAGCTCTCTGCTTCGG
TTCAGGGACGCCAAGATCGTTCAAGCAGGCATAGGAATAGCGGCAGTCCG
CCACAAACGTACTCATCATCATCTTCCCGCCTCGGAAAGCGAGGCACCGA
CTATTGGAAGAGATTTCCTCTACACACTGTCCAGGACATCCGTGACTGGC
AGAATGATTGTTTGAGCAATGATGGAGATGGTTCGACACGACACTCTTCG
GGACCTGAAGCCGTTAAGCGTCCTTCTGCCTCACAGTCTGAATACCAACC
GGAGACTGTATCTCCAAAAGACCAGATGCCTGAGTTTCAAGGCTATCGCG
ACATGCCTACGCTACCACGGATACATCAGATCGAGATACCAAACAGCCCG
ATAGATGCCGGTTCATCGCCGGCCAAAGTTGCATATGGCAGTGGATTCGA
TGGTGAGGCCAGAGAGAATCGTCCACGGATGGATCCTGTTTTCGAAGCAA
TACAGTATCAGCGCGCTCGAGCAGAAGCGGTCCATGAGTTCCCTGGTATG
CAGAAACCGAGTTTGTGGCGAGGTGCACCTTCTGTGAGCTTTCAACAACA
ATTTCTTTGGTAGTCCATTAGACAATTGATATATGGGGCATGCAAGTACT
ATTTTATTGATTATAAACTTGGTCGGTCGCTGGGACGCCGCAACGTTATA
TCTCCCGCGTGGTTTACTTACAAATAATTGCTTATTTTATCATGGAGGAA
TCCTTGAGTCTACTTTGCTAAAGGAGGAACTATATGCTGTATGTACAATG
GCCTAATCGTATGCTATTTCTCTACAATGACCAAACGAG
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Coding sequence (CDS) from alignment at ch7:2255183..2256521-

>KJC3_010073-T1 ID=KJC3_010073-T1|Name=KJC3_010073-T1|organism=Aspergillus niger KJC3|type=CDS|length=3300bp|location=Sequence derived from alignment at ch7:2255183..2256521- (Aspergillus niger KJC3)
TGGCCCGGCAAAAGGTTATATAGAAGCCTTGGAGCATCGTCTCCATGAAA
CAGAAAGTCTGCTTCTGAATCTACTCGCCCAAATCCCAGATTCTCAGCTC
TCTGCTTCGGTTCAGGGACGCCAAGATCGTTCAAGCAGGCATAGGAATAG
CGGCAGTCCGCCACAAACGTACTCATCATCATCTTCCCGCCTCGGAAAGC
GAGGCACCGACTATTGGAAGAGATTTCCTCTACACACTGTCCAGGACATC
CGTGACTGGCAGAATGATTGTTTGAGCAATGATGGAGATGGTTCGACACG
ACACTCTTCGGGACCTGAAGCCGTTAAGCGTCCTTCTGCCTCACAGTCTG
AATACCAACCGGAGACTGTATCTCCAAAAGACCAGATGCCTGAGTTTCAA
GGCTATCGCGACATGCCTACGCTACCACGGATACATCAGATCGAGATACC
AAACAGCCCGATAGATGCCGGTTCATCGCCGGCCAAAGTTGCATATGGCA
GTGGATTCGATGGTGAGGCCAGAGAGAATCGTCCACGGATGGATCCTGTT
TTCGAAGCAATACAGTATCAGCGCGCTCGAGCAGAAGCGGTCCATGAGTT
CCCTGGTATGCAGAAACCGAGTTTGTGGCGAGGTGCACCTTCTGTGAGCT
TTCAACAACAATTTCTTTGGTAGGCCAATTTGTACTCAATGCGACCAGCA
CAATCGGCCGTGCGACTGGCCCGAACAGTTGAAACGTGCAGTGGGAATAA
ATGGCGCCTGCAAAGCCGAACAAAGTGTCTCGCATTACAGTGGCTTGTAA
TTCCTGCCGGTTTCGGAAACAGAAGTGGCCCGGCAAAAGGTTATATAGAA
GCCTTGGAGCATCGTCTCCATGAAACAGAAAGTCTGCTTCTGAATCTACT
CGCCCAAATCCCAGATTCTCAGCTCTCTGCTTCGGTTCAGGGACGCCAAG
ATCGTTCAAGCAGGCATAGGAATAGCGGCAGTCCGCCACAAACGTACTCA
TCATCATCTTCCCGCCTCGGAAAGCGAGGCACCGACTATTGGAAGAGATT
TCCTCTACACACTGTCCAGGACATCCGTGACTGGCAGAATGATTGTTTGA
GCAATGATGGAGATGGTTCGACACGACACTCTTCGGGACCTGAAGCCGTT
AAGCGTCCTTCTGCCTCACAGTCTGAATACCAACCGGAGACTGTATCTCC
AAAAGACCAGATGCCTGAGTTTCAAGGCTATCGCGACATGCCTACGCTAC
CACGGATACATCAGATCGAGATACCAAACAGCCCGATAGATGCCGGTTCA
TCGCCGGCCAAAGTTGCATATGGCAGTGGATTCGATGGTGAGGCCAGAGA
GAATCGTCCACGGATGGATCCTGTTTTCGAAGCAATACAGTATCAGCGCG
CTCGAGCAGAAGCGGTCCATGAGTTCCCTGGTATGCAGAAACCGAGTTTG
TGGCGAGGTGCACCTTCTGTGAGCTTTCAACAACAATTTCTTTGGTAGGC
CAATTTGTACTCAATGCGACCAGCACAATCGGCCGTGCGACTGGCCCGAA
CAGTTGAAACGTGCAGTGGGAATAAATGGCGCCTGCAAAGCCGAACAAAG
TGTCTCGCATTACAGTGGCTTGTAATTCCTGCCGGTTTCGGAAACAGAAG
TGGCCCGGCAAAAGGTTATATAGAAGCCTTGGAGCATCGTCTCCATGAAA
CAGAAAGTCTGCTTCTGAATCTACTCGCCCAAATCCCAGATTCTCAGCTC
TCTGCTTCGGTTCAGGGACGCCAAGATCGTTCAAGCAGGCATAGGAATAG
CGGCAGTCCGCCACAAACGTACTCATCATCATCTTCCCGCCTCGGAAAGC
GAGGCACCGACTATTGGAAGAGATTTCCTCTACACACTGTCCAGGACATC
CGTGACTGGCAGAATGATTGTTTGAGCAATGATGGAGATGGTTCGACACG
ACACTCTTCGGGACCTGAAGCCGTTAAGCGTCCTTCTGCCTCACAGTCTG
AATACCAACCGGAGACTGTATCTCCAAAAGACCAGATGCCTGAGTTTCAA
GGCTATCGCGACATGCCTACGCTACCACGGATACATCAGATCGAGATACC
AAACAGCCCGATAGATGCCGGTTCATCGCCGGCCAAAGTTGCATATGGCA
GTGGATTCGATGGTGAGGCCAGAGAGAATCGTCCACGGATGGATCCTGTT
TTCGAAGCAATACAGTATCAGCGCGCTCGAGCAGAAGCGGTCCATGAGTT
CCCTGGTATGCAGAAACCGAGTTTGTGGCGAGGTGCACCTTCTGTGAGCT
TTCAACAACAATTTCTTTGGTAGGCCAATTTGTACTCAATGCGACCAGCA
CAATCGGCCGTGCGACTGGCCCGAACAGTTGAAACGTGCAGTGGGAATAA
ATGGCGCCTGCAAAGCCGAACAAAGTGTCTCGCATTACAGTGGCTTGTAA
TTCCTGCCGGTTTCGGAAACAGAAGTGGCCCGGCAAAAGGTTATATAGAA
GCCTTGGAGCATCGTCTCCATGAAACAGAAAGTCTGCTTCTGAATCTACT
CGCCCAAATCCCAGATTCTCAGCTCTCTGCTTCGGTTCAGGGACGCCAAG
ATCGTTCAAGCAGGCATAGGAATAGCGGCAGTCCGCCACAAACGTACTCA
TCATCATCTTCCCGCCTCGGAAAGCGAGGCACCGACTATTGGAAGAGATT
TCCTCTACACACTGTCCAGGACATCCGTGACTGGCAGAATGATTGTTTGA
GCAATGATGGAGATGGTTCGACACGACACTCTTCGGGACCTGAAGCCGTT
AAGCGTCCTTCTGCCTCACAGTCTGAATACCAACCGGAGACTGTATCTCC
AAAAGACCAGATGCCTGAGTTTCAAGGCTATCGCGACATGCCTACGCTAC
CACGGATACATCAGATCGAGATACCAAACAGCCCGATAGATGCCGGTTCA
TCGCCGGCCAAAGTTGCATATGGCAGTGGATTCGATGGTGAGGCCAGAGA
GAATCGTCCACGGATGGATCCTGTTTTCGAAGCAATACAGTATCAGCGCG
CTCGAGCAGAAGCGGTCCATGAGTTCCCTGGTATGCAGAAACCGAGTTTG
TGGCGAGGTGCACCTTCTGTGAGCTTTCAACAACAATTTCTTTGGTAGGC
CAATTTGTACTCAATGCGACCAGCACAATCGGCCGTGCGACTGGCCCGAA
CAGTTGAAACGTGCAGTGGGAATAAATGGCGCCTGCAAAGCCGAACAAAG
TGTCTCGCATTACAGTGGCTTGTAATTCCTGCCGGTTTCGGAAACAGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010073KJC3_010073Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010073-T1KJC3_010073-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010073-T1.cdsKJC3_010073-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010073-T1.utr3p1KJC3_010073-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010073-T1.exon4KJC3_010073-T1.exon4Aspergillus niger KJC3exon
KJC3_010073-T1.exon3KJC3_010073-T1.exon3Aspergillus niger KJC3exon
KJC3_010073-T1.exon2KJC3_010073-T1.exon2Aspergillus niger KJC3exon
KJC3_010073-T1.exon1KJC3_010073-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010073-T1.utr5p1KJC3_010073-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2255183..2256521 -
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