You are here

Home

KJC3_010092-T1, KJC3_010092-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010092-T1
Unique NameKJC3_010092-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2322254..2324335+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010092-T1 ID=KJC3_010092-T1|Name=KJC3_010092-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2082bp|location=Sequence derived from alignment at ch7:2322254..2324335+ (Aspergillus niger KJC3)
TTTCTGCCTCGCCGATAAAGGGAAACTTGAAAACATCCCAATCAACTTCG
TCAATTTCACAATTTGCAGCGTTTTTGTCAGACAGTCATCATGGCCGGTC
AGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAGCAAGGAGACT
GTAAGGCAATCCGACCGACCTGTTTGTTGTATAGATAGGCAATACTGATC
AAGTTCATGAATTAACCAGCCTGCTCCTCCCGCTCAACTTGTCGCCGCTC
TCAGTGCTTTCTTGAGCGAATCTGGTTTCTCCAAGACCAAGGAAGCTTTC
ACCAAAGAACTTGCCAGCAAGTCGATCGACTCTGATGCGAAGAATGTGCC
GTCCCTGCTTGAACTGTACCAATCCTGGGAAAAGTCCTCCGAGAAGTCCT
CCGGTTCTAGCTCTTCGGACAGCGACAGCGACAGTGAAAGTGAGAGTGGA
AGCGAGAGCGATAGCGAAAGCAGTGACAGCAGCTCCGACGAATCCAGCGA
TTCTGATGTCGAGATGAACGACAAGTCCGAGTCCGACAGCGATAGCGACT
CCGATGACGAGGAGGAGAAGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCC
CAGGGCACCAAGCGCAAGGCCGAGTCCAGCTCCTCCGAGTCTGATTCCGA
ATCTGAGGCCGATGAGGCTCCCAAGTCGAAGAAGACCAAGGTGACTTCCG
CCATGGAAGAGTCTTCTGACTCGGACTCCTCCGACTCTGAGTCCGATTCT
TCCTCTTCCTCTTCCGAGTCTGAAGAGTCCTCCGACTCGGACTCCTCCAG
CGACGACTCCTCCAGCTCCTCTTCTGAGTCCGATTCCGACTCCGATTCTG
ATTCGGACTCTGACTCTTCCTCTGACGACGAGGACGACAAGAAGGACGAC
AAGAAGGCCGATAAGAAGGCACTGAAGGCTGCTACCAAGACCCCTCTGCC
TCCGTCCGAATCTAGCTCCAGCGGCTCTTCCCCGTCTTCTTCGTCCGACT
CTGACACCACCGGAACCGTCAGCAACTCCGACTCTGCCCCCAAAGAGCAG
TCCAAGTCTGCCCAGACATCCTACTCCAGCAGCGCCAGCCCTGCTCCCGG
CAACGGCCCCCAGAAGAAGAAGCACACCGGTGCTCGCCCCACTCCTCTGG
CTCAGCTGAGTGAGCTCCCCACCGACCACCTCCTCTCGAACGACTACGTT
CCCTACGCCTACGCCGAGAAGGCCTGGCAGGATCTGTCGGTCACCCGCGG
CAAGGGCTTCACCAAGGAGAAGAACAAGAAGAAGCGCGGTTCTTACCGCG
GTGGTCCCATCGACATCTCGGGTGGCAAGTCCTTCAAGTTCGATGACTAG
GTCCGCGATACTATTTTAAAGATGGAGACCAGTTTCGCTTCCTGATATAG
GGGGACAACTAAAACATACCTACAGCTTTTACATGCTCGAAAACATGGGT
ATACAAAAAGTTTTATTCGCTTATGATTCCATCCATATAGATCTATATGC
AGCCTAGATGGGTCACTGAATCATTTTCTACAGCAAGGCGCTACTGGAGC
CCGGTCGGATTGCTTTCTTTCAGCTTTTCTTTTTGCTTGTTGCTTCACGC
TTCTTCACCTGTATGTACTATCTACTTACATCATCTAGATCTTTAGAGGT
GTTAAACATGTATTCAGATATCCTTGCATTTTCATGTTAACCCTAGACTT
TGAAGTATTCGTACAAGTCATACTCGTGGTGGTAAATCGTAGGCATGAGT
CTCTTCCTAAGATCGATTCAGATTCATCCATGCATCCTGCCATGAACTAC
AGTCCCCAAGTCCAGCTAAAGGACTATACCCAGTCAAAAATGCATGGCTC
ATGCGTTTCCAATGAAACAAGTCTCCTTTGAAACCTCTCTGCGCAACATA
GCACGGAAGAGAGCACCCAGTACACACACCATATACAAGCCCCATGCCCC
CTTCCTTCAGTCTAAACCAACATCCTCTCCCTATCAACAACTACTCTTCT
ATCAATCAGCCCGTCTCCACGCCCCCGGTTTCTCCAACCTCTCCCACCTC
CGATCCCACCCCGTGATCTCCTCCGCAAGACC
back to top

Coding sequence (CDS) from alignment at ch7:2322254..2324335+

>KJC3_010092-T1 ID=KJC3_010092-T1|Name=KJC3_010092-T1|organism=Aspergillus niger KJC3|type=CDS|length=2382bp|location=Sequence derived from alignment at ch7:2322254..2324335+ (Aspergillus niger KJC3)
ATGGCCGGTCAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAG
CAAGGAGACTCCTGCTCCTCCCGCTCAACTTGTCGCCGCTCTCAGTGCTT
TCTTGAGCGAATCTGGTTTCTCCAAGACCAAGGAAGCTTTCACCAAAGAA
CTTGCCAGCAAGTCGATCGACTCTGATGCGAAGAATGTGCCGTCCCTGCT
TGAACTGTACCAATCCTGGGAAAAGTCCTCCGAGAAGTCCTCCGGTTCTA
GCTCTTCGGACAGCGACAGCGACAGTGAAAGTGAGAGTGGAAGCGAGAGC
GATAGCGAAAGCAGTGACAGCAGCTCCGACGAATCCAGCGATTCTGATGT
CGAGATGAACGACAAGTCCGAGTCCGACAGCGATAGCGACTCCGATGACG
AGGAGGAGAAGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCCCAGGGCACC
AAGCGCAAGGCCGAGTCCAGCTCCTCCGAGTCTGATTCCGAATCTGAGGC
CGATGAGGCTCCCAAGTCGAAGAAGACCAAGGTGACTTCCGCCATGGAAG
AGTCTTCTGACTCGGACTCCTCCGACTCTGAGTCCGATTCTTCCTCTTCC
TCTTCCGAGTCTGAAGAGTCCTCCGACTCGGACTCCTCCAGCGACGACTC
CTCCAGCTCCTCTTCTGAGTCCGATTCCGACTCCGATTCTGATTCGGACT
CTGACTCTTCCTCTGACGACGAGGACGACAAGAAGGACGACAAGAAGGCC
GATAAGAAGGCACTGAAGGCTGCTACCAAGACCCCTCTGCCTCCGTCCGA
ATCTAGCTCCAGCGGCTCTTCCCCGTCTTCTTCGTCCGACTCTGACACCA
CCGGAACCGTCAGCAACTCCGACTCTGCCCCCAAAGAGCAGTCCAAGTCT
GCCCAGACATCCTACTCCAGCAGCGCCAGCCCTGCTCCCGGCAACGGCCC
CCAGAAGAAGAAGCACACCGGTGCTCGCCCCACTCCTCTGGCTCAGCTGA
GTGAGCTCCCCACCGACCACCTCCTCTCGAACGACTACGTTCCCTACGCC
TACGCCGAGAAGGCCTGGCAGGATCTGTCGGTCACCCGCGGCAAGGGCTT
CACCAAGGAGAAGAACAAGAAGAAGCGCGGTTCTTACCGCGGTGGTCCCA
TCGACATCTCGGGTGGCAAGTCCTTCAAGTTCGATGACTAGATGGCCGGT
CAGAAGTCTAAGCAGGCGAAGCCCGCCAAAGCGTCCAAGAGCAAGGAGAC
TCCTGCTCCTCCCGCTCAACTTGTCGCCGCTCTCAGTGCTTTCTTGAGCG
AATCTGGTTTCTCCAAGACCAAGGAAGCTTTCACCAAAGAACTTGCCAGC
AAGTCGATCGACTCTGATGCGAAGAATGTGCCGTCCCTGCTTGAACTGTA
CCAATCCTGGGAAAAGTCCTCCGAGAAGTCCTCCGGTTCTAGCTCTTCGG
ACAGCGACAGCGACAGTGAAAGTGAGAGTGGAAGCGAGAGCGATAGCGAA
AGCAGTGACAGCAGCTCCGACGAATCCAGCGATTCTGATGTCGAGATGAA
CGACAAGTCCGAGTCCGACAGCGATAGCGACTCCGATGACGAGGAGGAGA
AGAAGAAGCCTGCTGCTCCTGCTGCTAAGTCCCAGGGCACCAAGCGCAAG
GCCGAGTCCAGCTCCTCCGAGTCTGATTCCGAATCTGAGGCCGATGAGGC
TCCCAAGTCGAAGAAGACCAAGGTGACTTCCGCCATGGAAGAGTCTTCTG
ACTCGGACTCCTCCGACTCTGAGTCCGATTCTTCCTCTTCCTCTTCCGAG
TCTGAAGAGTCCTCCGACTCGGACTCCTCCAGCGACGACTCCTCCAGCTC
CTCTTCTGAGTCCGATTCCGACTCCGATTCTGATTCGGACTCTGACTCTT
CCTCTGACGACGAGGACGACAAGAAGGACGACAAGAAGGCCGATAAGAAG
GCACTGAAGGCTGCTACCAAGACCCCTCTGCCTCCGTCCGAATCTAGCTC
CAGCGGCTCTTCCCCGTCTTCTTCGTCCGACTCTGACACCACCGGAACCG
TCAGCAACTCCGACTCTGCCCCCAAAGAGCAGTCCAAGTCTGCCCAGACA
TCCTACTCCAGCAGCGCCAGCCCTGCTCCCGGCAACGGCCCCCAGAAGAA
GAAGCACACCGGTGCTCGCCCCACTCCTCTGGCTCAGCTGAGTGAGCTCC
CCACCGACCACCTCCTCTCGAACGACTACGTTCCCTACGCCTACGCCGAG
AAGGCCTGGCAGGATCTGTCGGTCACCCGCGGCAAGGGCTTCACCAAGGA
GAAGAACAAGAAGAAGCGCGGTTCTTACCGCGGTGGTCCCATCGACATCT
CGGGTGGCAAGTCCTTCAAGTTCGATGACTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010092KJC3_010092Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010092-T1KJC3_010092-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010092-T1.utr5p1KJC3_010092-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010092-T1.exon1KJC3_010092-T1.exon1Aspergillus niger KJC3exon
KJC3_010092-T1.exon2KJC3_010092-T1.exon2Aspergillus niger KJC3exon
KJC3_010092-T1.exon3KJC3_010092-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010092-T1.cdsKJC3_010092-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010092-T1.utr3p1KJC3_010092-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_010092-T1.utr3p2KJC3_010092-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007718
DBxrefPFAM:PF05022
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2322254..2324335 +
Powered by Drupal