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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2347644..2348443+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010103-T1 ID=KJC3_010103-T1|Name=KJC3_010103-T1|organism=Aspergillus niger KJC3|type=mRNA|length=800bp|location=Sequence derived from alignment at ch7:2347644..2348443+ (Aspergillus niger KJC3)
ATGCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCT
CTACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCT
CCCACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGAC
ACTCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCAC
CGACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTG
GTGCGATGGGGGCAATGTATATTATCCATGCTAGTGCGTCCCCTCTTTTG
CTCCATACCACCTCTATAATTATCTATAGTGCCTGAACTAAGCTTTGATT
CTCCTATAGGTATCACGGAGTACTTGATCATTTTCGGTATGGCTTCCCCT
GTATCCCGGATATTTTTATGCCCTCGATTGCACGAGCTAACTACTCTCTC
CCTGTCCATTAGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCAC
ACGGCCGACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGT
CCCTGGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACC
TCCGCCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCT
CTGGAGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGC
CGATACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCA
GAATCACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGA
back to topCoding sequence (CDS) from alignment at ch7:2347644..2348443+ >KJC3_010103-T1 ID=KJC3_010103-T1|Name=KJC3_010103-T1|organism=Aspergillus niger KJC3|type=CDS|length=1944bp|location=Sequence derived from alignment at ch7:2347644..2348443+ (Aspergillus niger KJC3)
ATGCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCT
CTACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCT
CCCACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGAC
ACTCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCAC
CGACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTG
GTGCGATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTG
ATCATTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACAC
GGCCGACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCC
CTGGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTC
CGCCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCT
GGAGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCG
ATACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGA
ATCACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGAAT
GCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCTCT
ACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCTCC
CACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGACAC
TCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCACCG
ACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTGGT
GCGATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTGAT
CATTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGG
CCGACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCCCT
GGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCG
CCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGG
AGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGAT
ACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAAT
CACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGAATGC
GCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCTCTAC
AGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCTCCCA
CCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGACACTC
GCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCACCGAC
ACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTGGTGC
GATGGGGGCAATGTATATTATCCATGCTAGTATCACGGAGTACTTGATCA
TTTTCGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGGCC
GACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCCCTGG
ATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCGCC
GCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGGAG
TACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGATAC
CTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAATCA
CTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006716 |
| DBxref | PFAM:PF04622 |
| Product | Squalene epoxidase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2347644..2348443 + |
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