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KJC3_010109-T1, KJC3_010109-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010109-T1
Unique NameKJC3_010109-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2361184..2362509+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010109-T1 ID=KJC3_010109-T1|Name=KJC3_010109-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1326bp|location=Sequence derived from alignment at ch7:2361184..2362509+ (Aspergillus niger KJC3)
AGTCTGATATCTGCCACTCCCCTCCCTTATCATCACAGCGCCAATATGTC
TGTCAGCTCAGCGTCTGGAAACATGCTTAGGCGCACTCTCTTCAGCGTCA
GATTGACAACGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCC
AAACCCGCGGTGTTCGGATCATACAGGAATGTCCACCGTTCGGCACGTTT
GCCTGCTATCACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTC
ACCAGCACTCGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGTCCAGC
AAGCGCACGATATTCATTCAGACGGAAAACACACCGAACCCTGATGTAAG
ACTCCCCGTGGCACACCAGCACGAAGATTCCAACGAACGAACAAGCATCT
GACCCTTGTATGCGGAACCCAACAGGCATTGAAGTTCATCCCTAACCACC
GTGTCCTCCCCGAAAATTTCCCGACCACCTTCCTCGAATACCTGTCTCCC
CGCTCTACCCTCGCTCCTCCGCACCCCTCTCCCTTGGCAGCAAGCCTGCT
CAACGTCGACGGTGTTACCTCTGTATTTTACGGGCCTGACTTCATCACCG
TAACTAAGGCGACCGACTCCAACTGGGCGCACATCAAGCCCGAAATCTTC
AGTCTCATCACTCAAGCCGTGACATCGGGCGAGGCGATCGTGAACACCGT
TGCAAAGACTGGTGAGAGTGGCCAGGAAGGTGGCGAGTCGGAGTCCCTGG
CCTACGAGGAAGAAGAAGATGAGGTGATCGGCATGATCAAGGAGCTTTTG
GACACAAGGATTCGGCCCGCCATCCAGGAAGACGGTGGCGACATTGAGTT
CCGCGGCTTTGAGAACGGCATTGTCTTGTTGAAGCTGCGCGGTGCTTGCC
GGACCTGCGATTCGAGCACCGTGACGCTGCGTAACGGTATTGAGTCTATG
CTTATGCATTATGTGAGTATCACACTACCTGCATGCATCTTGACAATAAA
GTTTGACTAATTGTGTGCTTTTTACCTACAGATTGAAGAAGTCCAAGGAG
TCGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATGCACGAGTTCGCC
AAGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGCCGCTACTGCCTC
GACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGAACACCCTCCTACT
TCGCCTCTTATACATAATTACTTATATTTCACGTGTATTGTACTTTGGAC
GTCAGATATACTACCATCTGGATTACGGTCTATAGAAAGCTTTGCCAGAC
AATGCTCAATCTCCTCTCTATCAGTA
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Coding sequence (CDS) from alignment at ch7:2361184..2362509+

>KJC3_010109-T1 ID=KJC3_010109-T1|Name=KJC3_010109-T1|organism=Aspergillus niger KJC3|type=CDS|length=2979bp|location=Sequence derived from alignment at ch7:2361184..2362509+ (Aspergillus niger KJC3)
ATGTCTGTCAGCTCAGCGTCTGGAAACATGCTTAGGCGCACTCTCTTCAG
CGTCAGATTGACAACGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGA
TCGCCAAACCCGCGGTGTTCGGATCATACAGGAATGTCCACCGTTCGGCA
CGTTTGCCTGCTATCACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAA
GCCTCACCAGCACTCGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGT
CCAGCAAGCGCACGATATTCATTCAGACGGAAAACACACCGAACCCTGAT
GCATTGAAGTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTTCCCGAC
CACCTTCCTCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGCACC
CCTCTCCCTTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACCTCTGTA
TTTTACGGGCCTGACTTCATCACCGTAACTAAGGCGACCGACTCCAACTG
GGCGCACATCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCGTGACAT
CGGGCGAGGCGATCGTGAACACCGTTGCAAAGACTGGTGAGAGTGGCCAG
GAAGGTGGCGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGATGAGGT
GATCGGCATGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCGCCATCC
AGGAAGACGGTGGCGACATTGAGTTCCGCGGCTTTGAGAACGGCATTGTC
TTGTTGAAGCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCACCGTGAC
GCTGCGTAACGGTATTGAGTCTATGCTTATGCATTATATTGAAGAAGTCC
AAGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATGCACGAG
TTCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGCCGCTAC
TGCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGAATGTCTG
TCAGCTCAGCGTCTGGAAACATGCTTAGGCGCACTCTCTTCAGCGTCAGA
TTGACAACGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCCAA
ACCCGCGGTGTTCGGATCATACAGGAATGTCCACCGTTCGGCACGTTTGC
CTGCTATCACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTCAC
CAGCACTCGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGTCCAGCAA
GCGCACGATATTCATTCAGACGGAAAACACACCGAACCCTGATGCATTGA
AGTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTTCCCGACCACCTTC
CTCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGCACCCCTCTCC
CTTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACCTCTGTATTTTACG
GGCCTGACTTCATCACCGTAACTAAGGCGACCGACTCCAACTGGGCGCAC
ATCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCGTGACATCGGGCGA
GGCGATCGTGAACACCGTTGCAAAGACTGGTGAGAGTGGCCAGGAAGGTG
GCGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGATGAGGTGATCGGC
ATGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCGCCATCCAGGAAGA
CGGTGGCGACATTGAGTTCCGCGGCTTTGAGAACGGCATTGTCTTGTTGA
AGCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCACCGTGACGCTGCGT
AACGGTATTGAGTCTATGCTTATGCATTATATTGAAGAAGTCCAAGGAGT
CGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATGCACGAGTTCGCCA
AGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGCCGCTACTGCCTCG
ACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGAATGTCTGTCAGCTC
AGCGTCTGGAAACATGCTTAGGCGCACTCTCTTCAGCGTCAGATTGACAA
CGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCCAAACCCGCG
GTGTTCGGATCATACAGGAATGTCCACCGTTCGGCACGTTTGCCTGCTAT
CACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTCACCAGCACT
CGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGTCCAGCAAGCGCACG
ATATTCATTCAGACGGAAAACACACCGAACCCTGATGCATTGAAGTTCAT
CCCTAACCACCGTGTCCTCCCCGAAAATTTCCCGACCACCTTCCTCGAAT
ACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGCACCCCTCTCCCTTGGCA
GCAAGCCTGCTCAACGTCGACGGTGTTACCTCTGTATTTTACGGGCCTGA
CTTCATCACCGTAACTAAGGCGACCGACTCCAACTGGGCGCACATCAAGC
CCGAAATCTTCAGTCTCATCACTCAAGCCGTGACATCGGGCGAGGCGATC
GTGAACACCGTTGCAAAGACTGGTGAGAGTGGCCAGGAAGGTGGCGAGTC
GGAGTCCCTGGCCTACGAGGAAGAAGAAGATGAGGTGATCGGCATGATCA
AGGAGCTTTTGGACACAAGGATTCGGCCCGCCATCCAGGAAGACGGTGGC
GACATTGAGTTCCGCGGCTTTGAGAACGGCATTGTCTTGTTGAAGCTGCG
CGGTGCTTGCCGGACCTGCGATTCGAGCACCGTGACGCTGCGTAACGGTA
TTGAGTCTATGCTTATGCATTATATTGAAGAAGTCCAAGGAGTCGAGCAA
GTGCTAGACCAAGAAGAGGAGATTTCGATGCACGAGTTCGCCAAGTTCGA
GGAAAAGCTGCGCCAGCAAAAGGGCGCTGCCGCTACTGCCTCGACGGGCG
GCAAGGGAACATTGGATTCGGCACCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0005506iron ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010109KJC3_010109Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010109-T1KJC3_010109-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010109-T1.utr5p1KJC3_010109-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010109-T1.exon1KJC3_010109-T1.exon1Aspergillus niger KJC3exon
KJC3_010109-T1.exon2KJC3_010109-T1.exon2Aspergillus niger KJC3exon
KJC3_010109-T1.exon3KJC3_010109-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010109-T1.cdsKJC3_010109-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010109-T1.utr3p1KJC3_010109-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR034904
DBxrefInterPro:IPR035433
DBxrefInterPro:IPR036498
DBxrefInterPro:IPR001075
DBxrefInterPro:IPR014824
DBxrefPFAM:PF01106
DBxrefPFAM:PF08712
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2361184..2362509 +
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