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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2383452..2384529+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010114-T1 ID=KJC3_010114-T1|Name=KJC3_010114-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1078bp|location=Sequence derived from alignment at ch7:2383452..2384529+ (Aspergillus niger KJC3)
TCTCCATTCTCTACACCTACCCAACCCATTTTCAAAACCAATTCCAGACC
CCAAAGAATAACCATGGTAAAGCCTCTAACCTTCAAAGGCGACAAGCCCA
AAAAACGCAAACACACCTCCACATCAACCTCCACCGATCCCTCCCATCCA
GCCAAAAAACAATCCACATCAACCAGCACCCCAACCGCCAATGAAGCCGA
AGACCCCTCAACCCACGATGAACACACCCTCTCCGATCAATCCTGGGTCT
CCGCCGACACAAGCAGCGACATCTCCGGCCCAATCCTGCTCATCCTCCGC
ACCACACCACCCACCTGCCTCGCGACCGACGCGCACGGCACCGTCTTCGC
CTCTGCGCTCGAGAACATGATCGAGGGGGATCCCCGGACCGCGGAACCCC
ATGATGTGCGACAGGTTTGGATTGCGAGTAAGATTGCTGGCATTGAGGGG
TGGAGTTTGAAGGGATCAAACGGGCGGTATGCATACACTCATTTCTGAAT
GTTGTTGTGGATGATAAAAGGGCTAATGGGGCTATTGTGCGACGGTTAGA
TACTTGACTAGCGACAAGCACGGCATCTTGTCCGCCAATGCATCGGCTAT
TTCGCAGCACGAGATATATACGATTAGTGAGAGTGGGGCGGGGGGAGGAG
GGTTCTTTGTCTTTGGGACCGGGACGGGAGCGTCTTCTGCTTCGCAGGGG
GGTGATGGCGTGGATGATAAGGAGAAGAAGGAAAAGAAGCAGACGTATCT
TGTTGCGCGGACTGTTGCGTCGAAGACGACTGCTTCGGGGACGAAGGTTG
AAATTCGTGGGGATGAGACTACTCTTGATGATGGGGAGGAGGATGGGGGA
GGGACGAATATTCGTGTGCGCATGCAGGCGCGCTTCAAACCGCGCATCCA
AGCGAGTAAGGAGATCAAGGCGCGGGAGAAGATCGGGAGAAAGGAGTTGG
AGGGTATTGTGGGGAGACGGTTGGATGATGATGAAGTCAAGAGGTTGAGG
AAGGCGAGGAAGGAGGGCGATTTTCATGAGGTCGTGTTGGATGTTAGAGT
GAGAGGGAAACATGATAAGTTTGCTTGA back to topCoding sequence (CDS) from alignment at ch7:2383452..2384529+ >KJC3_010114-T1 ID=KJC3_010114-T1|Name=KJC3_010114-T1|organism=Aspergillus niger KJC3|type=CDS|length=1884bp|location=Sequence derived from alignment at ch7:2383452..2384529+ (Aspergillus niger KJC3)
ATGGTAAAGCCTCTAACCTTCAAAGGCGACAAGCCCAAAAAACGCAAACA
CACCTCCACATCAACCTCCACCGATCCCTCCCATCCAGCCAAAAAACAAT
CCACATCAACCAGCACCCCAACCGCCAATGAAGCCGAAGACCCCTCAACC
CACGATGAACACACCCTCTCCGATCAATCCTGGGTCTCCGCCGACACAAG
CAGCGACATCTCCGGCCCAATCCTGCTCATCCTCCGCACCACACCACCCA
CCTGCCTCGCGACCGACGCGCACGGCACCGTCTTCGCCTCTGCGCTCGAG
AACATGATCGAGGGGGATCCCCGGACCGCGGAACCCCATGATGTGCGACA
GGTTTGGATTGCGAGTAAGATTGCTGGCATTGAGGGGTGGAGTTTGAAGG
GATCAAACGGGCGATACTTGACTAGCGACAAGCACGGCATCTTGTCCGCC
AATGCATCGGCTATTTCGCAGCACGAGATATATACGATTAGTGAGAGTGG
GGCGGGGGGAGGAGGGTTCTTTGTCTTTGGGACCGGGACGGGAGCGTCTT
CTGCTTCGCAGGGGGGTGATGGCGTGGATGATAAGGAGAAGAAGGAAAAG
AAGCAGACGTATCTTGTTGCGCGGACTGTTGCGTCGAAGACGACTGCTTC
GGGGACGAAGGTTGAAATTCGTGGGGATGAGACTACTCTTGATGATGGGG
AGGAGGATGGGGGAGGGACGAATATTCGTGTGCGCATGCAGGCGCGCTTC
AAACCGCGCATCCAAGCGAGTAAGGAGATCAAGGCGCGGGAGAAGATCGG
GAGAAAGGAGTTGGAGGGTATTGTGGGGAGACGGTTGGATGATGATGAAG
TCAAGAGGTTGAGGAAGGCGAGGAAGGAGGGCGATTTTCATGAGGTCGTG
TTGGATGTTAGAGTGAGAGGGAAACATGATAAGTTTGCTTGAATGGTAAA
GCCTCTAACCTTCAAAGGCGACAAGCCCAAAAAACGCAAACACACCTCCA
CATCAACCTCCACCGATCCCTCCCATCCAGCCAAAAAACAATCCACATCA
ACCAGCACCCCAACCGCCAATGAAGCCGAAGACCCCTCAACCCACGATGA
ACACACCCTCTCCGATCAATCCTGGGTCTCCGCCGACACAAGCAGCGACA
TCTCCGGCCCAATCCTGCTCATCCTCCGCACCACACCACCCACCTGCCTC
GCGACCGACGCGCACGGCACCGTCTTCGCCTCTGCGCTCGAGAACATGAT
CGAGGGGGATCCCCGGACCGCGGAACCCCATGATGTGCGACAGGTTTGGA
TTGCGAGTAAGATTGCTGGCATTGAGGGGTGGAGTTTGAAGGGATCAAAC
GGGCGATACTTGACTAGCGACAAGCACGGCATCTTGTCCGCCAATGCATC
GGCTATTTCGCAGCACGAGATATATACGATTAGTGAGAGTGGGGCGGGGG
GAGGAGGGTTCTTTGTCTTTGGGACCGGGACGGGAGCGTCTTCTGCTTCG
CAGGGGGGTGATGGCGTGGATGATAAGGAGAAGAAGGAAAAGAAGCAGAC
GTATCTTGTTGCGCGGACTGTTGCGTCGAAGACGACTGCTTCGGGGACGA
AGGTTGAAATTCGTGGGGATGAGACTACTCTTGATGATGGGGAGGAGGAT
GGGGGAGGGACGAATATTCGTGTGCGCATGCAGGCGCGCTTCAAACCGCG
CATCCAAGCGAGTAAGGAGATCAAGGCGCGGGAGAAGATCGGGAGAAAGG
AGTTGGAGGGTATTGTGGGGAGACGGTTGGATGATGATGAAGTCAAGAGG
TTGAGGAAGGCGAGGAAGGAGGGCGATTTTCATGAGGTCGTGTTGGATGT
TAGAGTGAGAGGGAAACATGATAAGTTTGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010114-T1.utr5p1 | KJC3_010114-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008999 |
| DBxref | InterPro:IPR010414 |
| DBxref | PFAM:PF06229 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2383452..2384529 + |
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