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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2409005..2411124+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010124-T1 ID=KJC3_010124-T1|Name=KJC3_010124-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2120bp|location=Sequence derived from alignment at ch7:2409005..2411124+ (Aspergillus niger KJC3)
CCTGGAACTCCTGTCAGTGACGCCGATTGTTGGTCTCTGTCGCTCGGACG
TACGATCGCCGTGAATGCATGTCTGCTGCTAAACCCCTCCCCTTCTTCCC
CGCCTCCTACTTCTACACGCTTTTAATCACCAGCCATGTCCAATATCTTT
GATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGC
ATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCGACCGATTGAAGTCGT
TCTATTACTTTTCTAACGCCGCACATGTCTCCGCCGACCTCCGATACTCG
CTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTG
GGTCGATATCTTTACCGCTTATTGGAAAGCTGTGGGGGAGATTGTTCGAT
TTGACGACTCCCCAAGACATGCCAGTTGGGTGAAGGTGTTCGATGCTTGG
AAGGATACGGCAAATCAATTAATCAGGGGATACTCGACAGGCAGTTTGCA
AGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGAGATATTTGCGGGCAT
TCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAAGACTCCGTCACTTTC
GACGATCGCTTCCAAGATGATGCGACGGATGCCAAGAATCCAAAGTTGGA
GGAAGCTACACGAGTGCTCAACAGAATGTTCACTTTGTGTCTAAGTGACC
GGTAAGCTATGTCCGGAAGCGTCGTGGATATACCATGCTAATGTTGTCTA
GGGCACCGATCGAGGAATCGCGGAAATGGGGCATTTACGACACTACGAAC
CTGTTGTTCAAGACATACTTTAAGCTTAACACCGTTGGCCTCTCCAAGAA
CTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACCTTCCTGGCTTGGACG
CCTTCCCCAAGTCCCATATTGTCACCTTTGAGTACTATGTCGGTGTTATA
CACTTTCTGGATGAGAATTATGCCGAAGTATGTGCTTCAATCATCAATGT
TAGTTGCCGGTGCTAATAGCTGGTTTCAATAGGCTGAAGAGCATTTGTCG
TACGCATGGAGGATGTGCAACAAACATGCCACAAAGAATAGAGAGTCAGT
ACTCCACATGCCGCCCCATGCTACATTGCTGACTACTTCAAGATTGATTC
TCACCTACCTCGTCCCCTGCCACCTCGTCACCACACATACCCTGCCCAGC
AAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCCGTCCTTT
GTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGTTCGATGCCGCAATGA
CAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATATACTTGCCCCTGGAA
AGGGGACGCGATATCGCTTTACGGAACCTCTTCCGCAAGGTCTTTATTGC
CGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTCCTATCCGCCGCACAC
GGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGGATCGGTACTCATGCT
GACGACCGGTCCCGCATAGACATTGATGAGGTTGAATGTCTGTTGTCGAA
CCTTATCTACAAGGTGCGTGTTGAGGTGCCCGAACTCTATCAAAGCATTT
GACTGACCAAAATTGTAGGGGTTGATGAAAGGATACATTGCCCGTGAGCG
CGGCATGGTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGAACGGGGG
TTTAATCCTGCTATCATCTGTCATCGCATCTTTGATGACAGCCTCCGTTT
TCTTTACACCTATCGAACAGTATCGGGCCACCAGTATGCCATGCACAAGG
GCATAACCCAAGAGCCGTCAAGATCACGGCTATGGCAGGGAAATCTGCGT
CGCTTGCCAGCCTGTATGATATGCGCTACCACAGGTCATTGAGCAGCTCC
CATGCGGCATGTATATCCTAGATGGCGGTCTACAGGATCTATGCCTCCAA
CGGCGCTGGTACATTAACGGACGGTATACCCCGCAGTTATGCAAGTCGTC
CAGTTAGGGCTGGTGACATGCCTCAAATGCCTGCTTCAAGCTGAAACAGC
TGTAATTTATACCATGATAGACCAGTTTATAAATACCACATAAAATATGA
ATACCTCATGACTGATACAG back to topCoding sequence (CDS) from alignment at ch7:2409005..2411124+ >KJC3_010124-T1 ID=KJC3_010124-T1|Name=KJC3_010124-T1|organism=Aspergillus niger KJC3|type=CDS|length=6810bp|location=Sequence derived from alignment at ch7:2409005..2411124+ (Aspergillus niger KJC3)
ATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGG
TGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCG
ACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCC
GACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCA
AGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGG
GGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAG
GTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTC
GACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGA
GATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAA
GACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAA
GAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTT
TGTGTCTAAGTGACCGGGCACCGATCGAGGAATCGCGGAAATGGGGCATT
TACGACACTACGAACCTGTTGTTCAAGACATACTTTAAGCTTAACACCGT
TGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACC
TTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTAC
TATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAGCTGAAGA
GCATTTGTCGTACGCATGGAGGATGTGCAACAAACATGCCACAAAGAATA
GAGAATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACACAT
ACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCT
CTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGTTCG
ATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATATAC
TTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCGCAA
GGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTCCTA
TCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGGATC
GGTACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGAATG
TCTGTTGTCGAACCTTATCTACAAGGGGTTGATGAAAGGATACATTGCCC
GTGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGA
ACGGGGGTTTAAATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAA
GATCGGCTCTGGTGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTG
CGGAGTACCCCGACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCA
CATGTCTCCGCCGACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAG
GCTTCCCAAGCAAGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATT
GGAAAGCTGTGGGGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCC
AGTTGGGTGAAGGTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAAT
CAGGGGATACTCGACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGT
ATTCTGTCGGGAGATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAG
CTTTCTGCCCAAGACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGC
GACGGATGCCAAGAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACA
GAATGTTCACTTTGTGTCTAAGTGACCGGGCACCGATCGAGGAATCGCGG
AAATGGGGCATTTACGACACTACGAACCTGTTGTTCAAGACATACTTTAA
GCTTAACACCGTTGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCT
CGTCTGCCGACCTTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTC
ACCTTTGAGTACTATGTCGGTGTTATACACTTTCTGGATGAGAATTATGC
CGAAGCTGAAGAGCATTTGTCGTACGCATGGAGGATGTGCAACAAACATG
CCACAAAGAATAGAGAATTGATTCTCACCTACCTCGTCCCCTGCCACCTC
GTCACCACACATACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCG
TCTCGAGAAGCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACC
TGGGCGGGTTCGATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAG
AGACGCATATACTTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAA
CCTCTTCCGCAAGGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAG
GACAGCCTCCTATCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCG
GCATTAAGGATCGGTACTCATGCTGACGACCGGTCCCGCATAGACATTGA
TGAGGTTGAATGTCTGTTGTCGAACCTTATCTACAAGGGGTTGATGAAAG
GATACATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACT
GCATTCCCTGGAACGGGGGTTTAAATGTCCAATATCTTTGATGATTTCAA
GGAAGGCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGCATCTCTCTCCC
CCGTCGCGACTGCGGAGTACCCCGACCGATTGAAGTCGTTCTATTACTTT
TCTAACGCCGCACATGTCTCCGCCGACCTCCGATACTCGCTCTTCCAGGC
GAATGGCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTGGGTCGATATCT
TTACCGCTTATTGGAAAGCTGTGGGGGAGATTGTTCGATTTGACGACTCC
CCAAGACATGCCAGTTGGGTGAAGGTGTTCGATGCTTGGAAGGATACGGC
AAATCAATTAATCAGGGGATACTCGACAGGCAGTTTGCAAGCCTGGACAG
TGCCATGCTTGTATTCTGTCGGGAGATATTTGCGGGCATTCGCGATGAAG
GCAGATGCTGAGCTTTCTGCCCAAGACTCCGTCACTTTCGACGATCGCTT
CCAAGATGATGCGACGGATGCCAAGAATCCAAAGTTGGAGGAAGCTACAC
GAGTGCTCAACAGAATGTTCACTTTGTGTCTAAGTGACCGGGCACCGATC
GAGGAATCGCGGAAATGGGGCATTTACGACACTACGAACCTGTTGTTCAA
GACATACTTTAAGCTTAACACCGTTGGCCTCTCCAAGAACTTGCTGCGGG
CCCTCAATGCCTCGTCTGCCGACCTTCCTGGCTTGGACGCCTTCCCCAAG
TCCCATATTGTCACCTTTGAGTACTATGTCGGTGTTATACACTTTCTGGA
TGAGAATTATGCCGAAGCTGAAGAGCATTTGTCGTACGCATGGAGGATGT
GCAACAAACATGCCACAAAGAATAGAGAATTGATTCTCACCTACCTCGTC
CCCTGCCACCTCGTCACCACACATACCCTGCCCAGCAAAAAGCTGCTTGC
ACCGTTTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCGACTGCATCA
AAAGGGGAGACCTGGGCGGGTTCGATGCCGCAATGACAGCCGGGGAAGAG
GAATTTGTTAAGAGACGCATATACTTGCCCCTGGAAAGGGGACGCGATAT
CGCTTTACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTGGATTTGACG
AGCCCAAGGAAGGACAGCCTCCTATCCGCCGCACACGGGTTCCCGTTGCC
GAGTTTGCAGCGGCATTAAGGATCGGTACTCATGCTGACGACCGGTCCCG
CATAGACATTGATGAGGTTGAATGTCTGTTGTCGAACCTTATCTACAAGG
GGTTGATGAAAGGATACATTGCCCGTGAGCGCGGCATGGTCGTATTGAGC
AAAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAAATGTCCAATATCTT
TGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGG
CATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCGACCGATTGAAGTCG
TTCTATTACTTTTCTAACGCCGCACATGTCTCCGCCGACCTCCGATACTC
GCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCT
GGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGGGGGAGATTGTTCGA
TTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAGGTGTTCGATGCTTG
GAAGGATACGGCAAATCAATTAATCAGGGGATACTCGACAGGCAGTTTGC
AAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGAGATATTTGCGGGCA
TTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAAGACTCCGTCACTTT
CGACGATCGCTTCCAAGATGATGCGACGGATGCCAAGAATCCAAAGTTGG
AGGAAGCTACACGAGTGCTCAACAGAATGTTCACTTTGTGTCTAAGTGAC
CGGGCACCGATCGAGGAATCGCGGAAATGGGGCATTTACGACACTACGAA
CCTGTTGTTCAAGACATACTTTAAGCTTAACACCGTTGGCCTCTCCAAGA
ACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACCTTCCTGGCTTGGAC
GCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTACTATGTCGGTGTTAT
ACACTTTCTGGATGAGAATTATGCCGAAGCTGAAGAGCATTTGTCGTACG
CATGGAGGATGTGCAACAAACATGCCACAAAGAATAGAGAATTGATTCTC
ACCTACCTCGTCCCCTGCCACCTCGTCACCACACATACCCTGCCCAGCAA
AAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGT
GCGACTGCATCAAAAGGGGAGACCTGGGCGGGTTCGATGCCGCAATGACA
GCCGGGGAAGAGGAATTTGTTAAGAGACGCATATACTTGCCCCTGGAAAG
GGGACGCGATATCGCTTTACGGAACCTCTTCCGCAAGGTCTTTATTGCCG
GTGGATTTGACGAGCCCAAGGAAGGACAGCCTCCTATCCGCCGCACACGG
GTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGGATCGGTACTCATGCTGA
CGACCGGTCCCGCATAGACATTGATGAGGTTGAATGTCTGTTGTCGAACC
TTATCTACAAGGGGTTGATGAAAGGATACATTGCCCGTGAGCGCGGCATG
GTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAAAT
GTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGGTG
CCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCGAC
CGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCCGA
CCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCAAG
AGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGGGG
GAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAGGT
GTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTCGA
CAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGAGA
TATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAAGA
CTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAAGA
ATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTTTG
TGTCTAAGTGACCGGGCACCGATCGAGGAATCGCGGAAATGGGGCATTTA
CGACACTACGAACCTGTTGTTCAAGACATACTTTAAGCTTAACACCGTTG
GCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACCTT
CCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTACTA
TGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAGCTGAAGAGC
ATTTGTCGTACGCATGGAGGATGTGCAACAAACATGCCACAAAGAATAGA
GAATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACACATAC
CCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCT
TCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGTTCGAT
GCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATATACTT
GCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCGCAAGG
TCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTCCTATC
CGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGGATCGG
TACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGAATGTC
TGTTGTCGAACCTTATCTACAAGGGGTTGATGAAAGGATACATTGCCCGT
GAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGAAC
GGGGGTTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010124-T1.utr5p1 | KJC3_010124-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010124-T1.utr3p1 | KJC3_010124-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000717 |
| DBxref | InterPro:IPR036388 |
| DBxref | PFAM:PF01399 |
| Product | COP9 signalosome (CSN) subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2409005..2411124 + |
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