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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2441771..2443617- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010136-T1 ID=KJC3_010136-T1|Name=KJC3_010136-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1847bp|location=Sequence derived from alignment at ch7:2441771..2443617- (Aspergillus niger KJC3)
CGCCACAACTTCATTTAGCCTCCAATGCCGCTCTCCGTGCCGTGTATGGC
GCCTCCAGTGGATACGCGCAATGGATTAAGTTCATAATGCCATGACCGAG
GGGTAGTTACTTATTACCCCTCCAAACCTTCCCCTTCTCTCCCTTCATCC
CCCCCTGATCCTGCTTCGACCGCGTCTCTATACCTTGTCTCAACACGACC
TTGTTACTCCTTAATCACCATGGCCTCTCCCACAGTAAAGCTAAACAGCG
GCTACGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAACAACGAC
ACCTGCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCGTCTGTT
TGACGGCGCCTGCGGTACTACCCTCCCCTCCCCTTATAAATCACTACCAA
TTCCCAATCTAAACACGCAAACCAGACTATGGCAACGAAGTCGAAGCCGG
CCAAGGCATCGCCCGCGCCATTAAAGACGGTCTCGTCAAGCGCGAAGAGC
TCTTCATCGTCTCCAAGCTCTGGAACAGCTTCCACGATGGCGACCGCGTC
GAGCCCATTTGCCGCAAGCAGCTCGCTGACTGGGGCATCGACTACTTCGA
CCTGTACATTGTGCACTTCCCCATCTCTCTGAAATACGTCGACCCTGCGG
TCCGCTACCCGCCGGGCTGGAAGTCCGAGAAGGACGAACTGGAGTTCGGC
AACGCCACGATCCAGGAGACCTGGACAGCGATGGAGTCGCTCGTGGACAA
GAAGCTTGCCCGCAGCATTGGTATCAGTAACTTCTCTGCGCAGCTGGTCA
TGGATCTGCTGCGGTATGCGCGCATTCGTCCTGCCACGCTGCAGATCGAG
CATCACCCGTACCTCACGCAGACAAGATTGGTCGAGTATGCCCAGAAGGA
GGGGTTGACGGTTACGGCGTATAGTTCTTTTGGTCCGTTGAGTTTCCTCG
AGTTGAATGTGCAGAATGCGGTGGATTCGCCGCCGCTGTTCGAGCATCAG
CTTGTTAAGAGCATTGCCGAGAAGCACGGAAGGACGCCGGCGCAGGTGTT
GTTGAGGTGGGCGACGCAGAGGGGGATTGCTGTTATCCCCAAGAGTAACA
ACCCTCAGCGGTTGAAGCAGAATTTGGATGTTACTGGGTGGAATTTGGAG
GAGGAGGAGATCAAGGCTATTTCTGGGTTGGATCGCGGGTTGCGGTTCAA
TGATCCTTTGGGAGTGAGTTTCCTTCCGCTTTTTATTTGATACGTGGGGA
TATTTGCTAACTTGATTATTACAGTACGGACTCTACGCTCCTATTTTCTA
GACCATTCAGCTATGAGTGTATATGATATATATGAATACATAACAACTTA
GATGTTATACTTGATGCATGTGACATGTAGATAATAGATAAGATAAAATA
GATAAACCCGCCAAGACCGCGTCGCGATAACCACATTTCTCCATCCATTC
ATCCATTACCCTCTCTCTCCCTTTCAATTCATCCATTCATTACTCATGAA
CATCCCACCACACCCCCCTCAACTCCAATCCTAAGAACCGCACAATAAAG
ACAAAATGACCCTCAAACCCTTAACTAGCAGCATCCACATCAAAACCCAC
CCCGCCCCGCGCTCCCTCTCCGAAAGCAAACTCATTCTCTCCGCACTCCA
GAAATTCGGCGAAGTCGTGACATTTCGAAATCTAAAGGTAGCCCTCTCCC
CCCTTACCCCCCTTTTTCCTAAATACATAAACCCAATGCTAAAGAAATAT
GGTGAATTTAGTACGACCCCACAAACACATCCCCCAAATCCGCGCACAAC
ACCATCGCCATCTTCGAGTCCGCATCCGCGGCGTCTTCGGCCATTGC back to topCoding sequence (CDS) from alignment at ch7:2441771..2443617- >KJC3_010136-T1 ID=KJC3_010136-T1|Name=KJC3_010136-T1|organism=Aspergillus niger KJC3|type=CDS|length=1920bp|location=Sequence derived from alignment at ch7:2441771..2443617- (Aspergillus niger KJC3)
ACTATGGCAACGAAGTCGAAGCCGGCCAAGGCATCGCCCGCGCCATTAAA
GACGGTCTCGTCAAGCGCGAAGAGCTCTTCATCGTCTCCAAGCTCTGGAA
CAGCTTCCACGATGGCGACCGCGTCGAGCCCATTTGCCGCAAGCAGCTCG
CTGACTGGGGCATCGACTACTTCGACCTGTACATTGTGCACTTCCCCATC
TCTCTGAAATACGTCGACCCTGCGGTCCGCTACCCGCCGGGCTGGAAGTC
CGAGAAGGACGAACTGGAGTTCGGCAACGCCACGATCCAGGAGACCTGGA
CAGCGATGGAGTCGCTCGTGGACAAGAAGCTTGCCCGCAGCATTGGTATC
AGTAACTTCTCTGCGCAGCTGGTCATGGATCTGCTGCGGTATGCGCGCAT
TCGTCCTGCCACGCTGCAGATCGAGCATCACCCGTACCTCACGCAGACAA
GATTGGTCGAGTATGCCCAGAAGGAGGGGTTGACGGTTACGGCGTATAGT
TCTTTTGGTCCGTTGAGTTTCCTCGAGTTGAATGTGCAGAATGCGGTGGA
TTCGCCGCCGCTGTTCGAGCATCAGCTTGTTAAGAGCATTGCCGAGAAGC
ACGGAAGGACGCCGGCGCAGGTGTTGTTGAGGTGGGCGACGCAGAGGGGG
ATTGCTGTTATCCCCAAGAGTAACAACCCTCAGCGGTTGAAGCAGAATTT
GGATGTTACTGGGTGGAATTTGGAGGAGGAGGAGATCAAGGCTATTTCTG
GGTTGGATCGCGGGTTGCGGTTCAATGATCCTTTGGGAGTGAGTTTCCTT
CCGCTTTTTATTTGAATGGCCTCTCCCACAGTAAAGCTAAACAGCGGCTA
CGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAACAACGACACCT
GCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCGTCTGTTTGAC
GGCGCCTGCGACTATGGCAACGAAGTCGAAGCCGGCCAAGGCATCGCCCG
CGCCATTAAAGACGGTCTCGTCAAGCGCGAAGAGCTCTTCATCGTCTCCA
AGCTCTGGAACAGCTTCCACGATGGCGACCGCGTCGAGCCCATTTGCCGC
AAGCAGCTCGCTGACTGGGGCATCGACTACTTCGACCTGTACATTGTGCA
CTTCCCCATCTCTCTGAAATACGTCGACCCTGCGGTCCGCTACCCGCCGG
GCTGGAAGTCCGAGAAGGACGAACTGGAGTTCGGCAACGCCACGATCCAG
GAGACCTGGACAGCGATGGAGTCGCTCGTGGACAAGAAGCTTGCCCGCAG
CATTGGTATCAGTAACTTCTCTGCGCAGCTGGTCATGGATCTGCTGCGGT
ATGCGCGCATTCGTCCTGCCACGCTGCAGATCGAGCATCACCCGTACCTC
ACGCAGACAAGATTGGTCGAGTATGCCCAGAAGGAGGGGTTGACGGTTAC
GGCGTATAGTTCTTTTGGTCCGTTGAGTTTCCTCGAGTTGAATGTGCAGA
ATGCGGTGGATTCGCCGCCGCTGTTCGAGCATCAGCTTGTTAAGAGCATT
GCCGAGAAGCACGGAAGGACGCCGGCGCAGGTGTTGTTGAGGTGGGCGAC
GCAGAGGGGGATTGCTGTTATCCCCAAGAGTAACAACCCTCAGCGGTTGA
AGCAGAATTTGGATGTTACTGGGTGGAATTTGGAGGAGGAGGAGATCAAG
GCTATTTCTGGGTTGGATCGCGGGTTGCGGTTCAATGATCCTTTGGGAGT
GAGTTTCCTTCCGCTTTTTATTTGAATGGCCTCTCCCACAGTAAAGCTAA
ACAGCGGCTACGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAAC
AACGACACCTGCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCG
TCTGTTTGACGGCGCCTGCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010136-T1.utr3p1 | KJC3_010136-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010136-T1.utr5p1 | KJC3_010136-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018170 |
| DBxref | InterPro:IPR036812 |
| DBxref | InterPro:IPR023210 |
| DBxref | InterPro:IPR020471 |
| DBxref | PFAM:PF00248 |
| Product | NAD(P)H-dependent D-xylose reductase (XR) |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2441771..2443617 - |
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