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KJC3_010136-T2, KJC3_010136-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010136-T2
Unique NameKJC3_010136-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2441771..2443617-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010136-T2 ID=KJC3_010136-T2|Name=KJC3_010136-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1847bp|location=Sequence derived from alignment at ch7:2441771..2443617- (Aspergillus niger KJC3)
CGCCACAACTTCATTTAGCCTCCAATGCCGCTCTCCGTGCCGTGTATGGC
GCCTCCAGTGGATACGCGCAATGGATTAAGTTCATAATGCCATGACCGAG
GGGTAGTTACTTATTACCCCTCCAAACCTTCCCCTTCTCTCCCTTCATCC
CCCCCTGATCCTGCTTCGACCGCGTCTCTATACCTTGTCTCAACACGACC
TTGTTACTCCTTAATCACCATGGCCTCTCCCACAGTAAAGCTAAACAGCG
GCTACGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAACAACGAC
ACCTGCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCGTCTGTT
TGACGGCGCCTGCGGTACTACCCTCCCCTCCCCTTATAAATCACTACCAA
TTCCCAATCTAAACACGCAAACCAGACTATGGCAACGAAGTCGAAGCCGG
CCAAGGCATCGCCCGCGCCATTAAAGACGGTCTCGTCAAGCGCGAAGAGC
TCTTCATCGTCTCCAAGCTCTGGAACAGCTTCCACGATGGCGACCGCGTC
GAGCCCATTTGCCGCAAGCAGCTCGCTGACTGGGGCATCGACTACTTCGA
CCTGTACATTGTGCACTTCCCCATCTCTCTGAAATACGTCGACCCTGCGG
TCCGCTACCCGCCGGGCTGGAAGTCCGAGAAGGACGAACTGGAGTTCGGC
AACGCCACGATCCAGGAGACCTGGACAGCGATGGAGTCGCTCGTGGACAA
GAAGCTTGCCCGCAGCATTGGTATCAGTAACTTCTCTGCGCAGCTGGTCA
TGGATCTGCTGCGGTATGCGCGCATTCGTCCTGCCACGCTGCAGATCGAG
CATCACCCGTACCTCACGCAGACAAGATTGGTCGAGTATGCCCAGAAGGA
GGGGTTGACGGTTACGGCGTATAGTTCTTTTGGTCCGTTGAGTTTCCTCG
AGTTGAATGTGCAGAATGCGGTGGATTCGCCGCCGCTGTTCGAGCATCAG
CTTGTTAAGAGCATTGCCGAGAAGCACGGAAGGACGCCGGCGCAGGTGTT
GTTGAGGTGGGCGACGCAGAGGGGGATTGCTGTTATCCCCAAGAGTAACA
ACCCTCAGCGGTTGAAGCAGAATTTGGATGTTACTGGGTGGAATTTGGAG
GAGGAGGAGATCAAGGCTATTTCTGGGTTGGATCGCGGGTTGCGGTTCAA
TGATCCTTTGGGAGTGAGTTTCCTTCCGCTTTTTATTTGATACGTGGGGA
TATTTGCTAACTTGATTATTACAGTACGGACTCTACGCTCCTATTTTCTA
GACCATTCAGCTATGAGTGTATATGATATATATGAATACATAACAACTTA
GATGTTATACTTGATGCATGTGACATGTAGATAATAGATAAGATAAAATA
GATAAACCCGCCAAGACCGCGTCGCGATAACCACATTTCTCCATCCATTC
ATCCATTACCCTCTCTCTCCCTTTCAATTCATCCATTCATTACTCATGAA
CATCCCACCACACCCCCCTCAACTCCAATCCTAAGAACCGCACAATAAAG
ACAAAATGACCCTCAAACCCTTAACTAGCAGCATCCACATCAAAACCCAC
CCCGCCCCGCGCTCCCTCTCCGAAAGCAAACTCATTCTCTCCGCACTCCA
GAAATTCGGCGAAGTCGTGACATTTCGAAATCTAAAGGTAGCCCTCTCCC
CCCTTACCCCCCTTTTTCCTAAATACATAAACCCAATGCTAAAGAAATAT
GGTGAATTTAGTACGACCCCACAAACACATCCCCCAAATCCGCGCACAAC
ACCATCGCCATCTTCGAGTCCGCATCCGCGGCGTCTTCGGCCATTGC
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Coding sequence (CDS) from alignment at ch7:2441771..2443617-

>KJC3_010136-T2 ID=KJC3_010136-T2|Name=KJC3_010136-T2|organism=Aspergillus niger KJC3|type=CDS|length=2880bp|location=Sequence derived from alignment at ch7:2441771..2443617- (Aspergillus niger KJC3)
TACGGACTCTACGCTCCTATTTTCTAGACTATGGCAACGAAGTCGAAGCC
GGCCAAGGCATCGCCCGCGCCATTAAAGACGGTCTCGTCAAGCGCGAAGA
GCTCTTCATCGTCTCCAAGCTCTGGAACAGCTTCCACGATGGCGACCGCG
TCGAGCCCATTTGCCGCAAGCAGCTCGCTGACTGGGGCATCGACTACTTC
GACCTGTACATTGTGCACTTCCCCATCTCTCTGAAATACGTCGACCCTGC
GGTCCGCTACCCGCCGGGCTGGAAGTCCGAGAAGGACGAACTGGAGTTCG
GCAACGCCACGATCCAGGAGACCTGGACAGCGATGGAGTCGCTCGTGGAC
AAGAAGCTTGCCCGCAGCATTGGTATCAGTAACTTCTCTGCGCAGCTGGT
CATGGATCTGCTGCGGTATGCGCGCATTCGTCCTGCCACGCTGCAGATCG
AGCATCACCCGTACCTCACGCAGACAAGATTGGTCGAGTATGCCCAGAAG
GAGGGGTTGACGGTTACGGCGTATAGTTCTTTTGGTCCGTTGAGTTTCCT
CGAGTTGAATGTGCAGAATGCGGTGGATTCGCCGCCGCTGTTCGAGCATC
AGCTTGTTAAGAGCATTGCCGAGAAGCACGGAAGGACGCCGGCGCAGGTG
TTGTTGAGGTGGGCGACGCAGAGGGGGATTGCTGTTATCCCCAAGAGTAA
CAACCCTCAGCGGTTGAAGCAGAATTTGGATGTTACTGGGTGGAATTTGG
AGGAGGAGGAGATCAAGGCTATTTCTGGGTTGGATCGCGGGTTGCGGTTC
AATGATCCTTTGGGAATGGCCTCTCCCACAGTAAAGCTAAACAGCGGCTA
CGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAACAACGACACCT
GCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCGTCTGTTTGAC
GGCGCCTGCGTACGGACTCTACGCTCCTATTTTCTAGACTATGGCAACGA
AGTCGAAGCCGGCCAAGGCATCGCCCGCGCCATTAAAGACGGTCTCGTCA
AGCGCGAAGAGCTCTTCATCGTCTCCAAGCTCTGGAACAGCTTCCACGAT
GGCGACCGCGTCGAGCCCATTTGCCGCAAGCAGCTCGCTGACTGGGGCAT
CGACTACTTCGACCTGTACATTGTGCACTTCCCCATCTCTCTGAAATACG
TCGACCCTGCGGTCCGCTACCCGCCGGGCTGGAAGTCCGAGAAGGACGAA
CTGGAGTTCGGCAACGCCACGATCCAGGAGACCTGGACAGCGATGGAGTC
GCTCGTGGACAAGAAGCTTGCCCGCAGCATTGGTATCAGTAACTTCTCTG
CGCAGCTGGTCATGGATCTGCTGCGGTATGCGCGCATTCGTCCTGCCACG
CTGCAGATCGAGCATCACCCGTACCTCACGCAGACAAGATTGGTCGAGTA
TGCCCAGAAGGAGGGGTTGACGGTTACGGCGTATAGTTCTTTTGGTCCGT
TGAGTTTCCTCGAGTTGAATGTGCAGAATGCGGTGGATTCGCCGCCGCTG
TTCGAGCATCAGCTTGTTAAGAGCATTGCCGAGAAGCACGGAAGGACGCC
GGCGCAGGTGTTGTTGAGGTGGGCGACGCAGAGGGGGATTGCTGTTATCC
CCAAGAGTAACAACCCTCAGCGGTTGAAGCAGAATTTGGATGTTACTGGG
TGGAATTTGGAGGAGGAGGAGATCAAGGCTATTTCTGGGTTGGATCGCGG
GTTGCGGTTCAATGATCCTTTGGGAATGGCCTCTCCCACAGTAAAGCTAA
ACAGCGGCTACGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAAC
AACGACACCTGCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCG
TCTGTTTGACGGCGCCTGCGTACGGACTCTACGCTCCTATTTTCTAGACT
ATGGCAACGAAGTCGAAGCCGGCCAAGGCATCGCCCGCGCCATTAAAGAC
GGTCTCGTCAAGCGCGAAGAGCTCTTCATCGTCTCCAAGCTCTGGAACAG
CTTCCACGATGGCGACCGCGTCGAGCCCATTTGCCGCAAGCAGCTCGCTG
ACTGGGGCATCGACTACTTCGACCTGTACATTGTGCACTTCCCCATCTCT
CTGAAATACGTCGACCCTGCGGTCCGCTACCCGCCGGGCTGGAAGTCCGA
GAAGGACGAACTGGAGTTCGGCAACGCCACGATCCAGGAGACCTGGACAG
CGATGGAGTCGCTCGTGGACAAGAAGCTTGCCCGCAGCATTGGTATCAGT
AACTTCTCTGCGCAGCTGGTCATGGATCTGCTGCGGTATGCGCGCATTCG
TCCTGCCACGCTGCAGATCGAGCATCACCCGTACCTCACGCAGACAAGAT
TGGTCGAGTATGCCCAGAAGGAGGGGTTGACGGTTACGGCGTATAGTTCT
TTTGGTCCGTTGAGTTTCCTCGAGTTGAATGTGCAGAATGCGGTGGATTC
GCCGCCGCTGTTCGAGCATCAGCTTGTTAAGAGCATTGCCGAGAAGCACG
GAAGGACGCCGGCGCAGGTGTTGTTGAGGTGGGCGACGCAGAGGGGGATT
GCTGTTATCCCCAAGAGTAACAACCCTCAGCGGTTGAAGCAGAATTTGGA
TGTTACTGGGTGGAATTTGGAGGAGGAGGAGATCAAGGCTATTTCTGGGT
TGGATCGCGGGTTGCGGTTCAATGATCCTTTGGGAATGGCCTCTCCCACA
GTAAAGCTAAACAGCGGCTACGACATGCCCCTCGTGGGCTTCGGTCTCTG
GAAGGTGAACAACGACACCTGCGCCGACCAGATCTACCACGCCATCAAGG
AAGGATACCGTCTGTTTGACGGCGCCTGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
XYL1_1KJC3_010136Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010136-T2KJC3_010136-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010136-T2.cdsKJC3_010136-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010136-T2.utr3p2KJC3_010136-T2.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_010136-T2.utr3p1KJC3_010136-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010136-T2.exon4KJC3_010136-T2.exon4Aspergillus niger KJC3exon
KJC3_010136-T2.exon3KJC3_010136-T2.exon3Aspergillus niger KJC3exon
KJC3_010136-T2.exon2KJC3_010136-T2.exon2Aspergillus niger KJC3exon
KJC3_010136-T2.exon1KJC3_010136-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010136-T2.utr5p1KJC3_010136-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018170
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR020471
DBxrefPFAM:PF00248
Product variant 2
ProductNAD(P)H-dependent D-xylose reductase (XR)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2441771..2443617 -
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