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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2446899..2450261- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010138-T2 ID=KJC3_010138-T2|Name=KJC3_010138-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3363bp|location=Sequence derived from alignment at ch7:2446899..2450261- (Aspergillus niger KJC3)
CAATTTTAGTGGCACACATTGTCACAATCATGGAGAGCACCAGAGTATTT
GTCTCTGGCCTTCCGCCAACCTTGTCTGATGATCAATTGAGGAAGCACTT
CGCTACTCGCTTCCAAGTCACGGACGCTCATGTATTGCCTAAACGCAGGA
TTGGCTTCGTGGGCTTTAAGAGCCATGAGGTGGCCCAGCAGGCTGTGTCT
TACTTCAATAAGACTTACGTGAAGATGTCCAAAATCTCAGTAGACATTGC
TAAGCCGGTATGTGCTCTACTCCCTATTCCCACTTGCTTTGTTTCTTTTG
TTTTCCCCGCTGACAGTCAAGGTGGTCTTGTGACTGACCAGTAATCTTGT
AGATCGATGCCGAACCCACTCGCAAAGCTGGAAAACATGATAAGAGTTCT
GCTAGCAATGCTGCAGATACTTCCCTCAAGCGTAAACGGGATGGCGAGAA
CGCCCCGCAAGACGCTCGCTTGCAAGAGTATCTCTCTGTAATGCAACATT
CGTCTAAGACCAAGACATGGGCAAATGATGATGTGCCCAAGCCGCCGGAG
AATGACTCACCTGCAGAACAGCCCGCTGAAGTAGAGGAGCAACCTCAGGA
GCTTACCTATGCACAGAGGAAGAAGGCGAAGCTTGGCGAGGAATATGATC
ACTCTAAGGAGATGCACACAGCTGACCGCGAAGCTCATGGATCACCTGAA
CCCATGGTGGTAGACCACAGTGGAGAAGGCAACGCCGAGGCACCGGCAGA
GCAAGATGATACTGTCGCCGAGGCTGAGGCGCCAGCTGTTTCGGATGCGG
ACTGGCTCCGCTCCAAGACAAGTCGCCTTCTTGGTCTGCTTGATGAGGAA
GAGCAGGCGGATTTCGACGCTGCTGCGCAGCAGAAGGAATCTGCAGCTCC
AGAAGAAGCAGAGGATCCAGGTGCTGACTCTAGGGATGCCCAGATTGTCG
CTCCCGCAGCGACTGAGGATAAGACGGTTCAGGAGCCGCAGGTCGACACG
AATATTGAGAATATCCGTCTATCTGCACGTCTGTTCGTGCGAAACCTTGC
TTATGACACCTCGGAGTCAGATCTTGAACCGCTATTTGCTCCCTTCGGAC
GAATTGAAGAGGTTAGTGAATCCATGAGTTTTATTTTCTGCCATCCACGA
CCCCCTCCCCAGCTCAATGATGATCGTCCTGATAGGGACATCAGATGCAA
AGCACATGATGTTACCAGGAAAGAGTATTTTAGTAGATGCCTCTTGTTAT
CTGATGAGCTATACACCTCAATATTGTTGCTTGATTCACTCATTAGTTAT
CTGAATTATGCTAATGTGCCTAGATCCATGTGGCTTTCGATACTAGGGTT
AATACCAGCAAGGGCTTTGCCTATATTCAGTACCTCGACGCAGATGCGGC
CGTAGAGGCCTACAAGAATCTTGACGGAAAGCACTTCCAAGGTCGCTTGA
TGCATATTCTGCCAGCAGCTGCAAAGAAGACTTACAAGATTGATGATGCG
GAGCTGGCGAAACTACCCCTGAAAAAGCAAAAGCAGATCAAAAAGAAGAT
GGATGCTTCGTCTTCTACGTTTAGCTGGAACTCTCTCTACATGAACGTGA
GTAGCTCGTATGATAGCCGCCAGTACTATACGCTAATATATTGCAGACGG
ATGCCGTTATGTCTTCAGTAGCTGAGCGACTTGGTGTTTCCAAAGCAGAT
CTTTTGGATCCTACTTCATCTGATGCTGCTGTGAAGCAGGCCCACGCTGA
AACCCACGTAATTCAAGAAACGAAAGCTTACTTCTCAGCTAATGGGGTTA
ATATCGAAGCCTTCAAGCAGCGGGAGCGTGGAAACACTGCTATCCTTGTA
AAGAACTTCTCGTACGGCGTCAAGACTGATGAGCTCAGGAAAATGTTCGA
ACCATTCGGGCAAATAACGAGGTTACTCATGCCCCCTAGTGGAACGATAG
CTATCGTGGAGTTTTCGAGACCCGATGAGGCCCAGAAGGCTTTCAAGGGA
CTTGCCTACCGGAAACTCGGAGACTCCATCCTCTTCCTGGAGAAGGCACC
CAAGGATCTGTTTGATGCTGCAGTCGTGCCACAGAAGGCAACGATAGAGA
CTAAGGCTGTCTCTCAAGGCTTCTCCACTGCTGACACTTTCGCGGCAGAT
GAGGTTGATGACCTTACGCCCACTACAACCCTCTTCGTAAAGAACCTCAA
CTTTGCTACTACGAACCAGAGTTTTGTGGACCTCTTCCGGCCACTGGACG
GCTTTGTGTCTGCTAAGATCAAGACGAAGCCTGACCCTAAGCATCCTGGA
CAGACGCTCAGCATGGGTTTTGGTTTCGTGGAGTTCAGGTCAAAAGCCCA
GGCTCAATCTGCGCTTGCCGCCATGAATGGCTACAAACTTGATCAGCATG
AACTGGTAGTTAGGGTGTCTCACCGTGGAATGGATGCAGCTGAAGAGCGG
AGACGTGAAGATACCGCGAAGAAGGTTGCAGCCAGAAGGACGAAGATCAT
CATTAAGAACTTGCCGTTCCAGGCCACCAAGAAGGATGTTCGGTCACTCT
TTGGAGCCTACGGGCAACTTCGCTCTGTGCGGGTTCCTCAGAAGTTTGAT
AGATCGGCTCGTGGTTTCGGTTTTGCGGATTTTGTAAGCGCTCGCGAAGC
GGAAAACGCCATGGACGCGTTGAAGAATACCCATCTTCTGGGCAGAAAGC
TGGTCCTGGAGTTTGCAAACGAGGAGGCAATCGATGCCGAGGAAGAAATC
AAGCAGATCGAAAAGAAAGTAGGGGAACAGATGGACAGGGTCAAGCTACA
AAAGCTTGCCGGGCCTGGGCGCAAGAAGTTCACTGTAGGGGCCCAGGACG
GCGAAGAGGACTAAGTCCCTACTCTTTCTCCCTGTTGGTAGGGACAGACA
ATAGCAATGGTTCGATTTTGATATTAATATCCCTTGCGTTCCCGGACGCT
GAGCATGGTGCGGACGCAGGTTTAACACGTTCCTGCGGCTGTCAACACGT
ACATACGCGCGCGTCCTGCAGAGTTACCCGTCCGCTCGTGCAGTGGACTT
CTTTCATCCGAGTCTATTCCTGTCATCCCATCGCGGGTTCCTTTATCCTC
GCCGATTCAAGGCTTCCTTCCCTTAACTCCTTATACACCTAGTTGCTCGA
GCCCTGGTTATCCAAGTGAAGATTAGTCTGGTCCTGGGATTGTCCAGGCC
ATACATTCCAACATGATCTACGTAACCACCTCTTACATTCCACTGCCGTG
GCACTGGACGATGTCGTTGGCCACTGCTCATTCCAGAGGATGGCCATTGC
CACGGACCTGGACGTCTAGCTGCTCCTAAATGTATCTCAAATTAGCAGTC
ACTGCTCGTCTCG back to topCoding sequence (CDS) from alignment at ch7:2446899..2450261- >KJC3_010138-T2 ID=KJC3_010138-T2|Name=KJC3_010138-T2|organism=Aspergillus niger KJC3|type=CDS|length=6336bp|location=Sequence derived from alignment at ch7:2446899..2450261- (Aspergillus niger KJC3)
ACGGATGCCGTTATGTCTTCAGTAGCTGAGCGACTTGGTGTTTCCAAAGC
AGATCTTTTGGATCCTACTTCATCTGATGCTGCTGTGAAGCAGGCCCACG
CTGAAACCCACGTAATTCAAGAAACGAAAGCTTACTTCTCAGCTAATGGG
GTTAATATCGAAGCCTTCAAGCAGCGGGAGCGTGGAAACACTGCTATCCT
TGTAAAGAACTTCTCGTACGGCGTCAAGACTGATGAGCTCAGGAAAATGT
TCGAACCATTCGGGCAAATAACGAGGTTACTCATGCCCCCTAGTGGAACG
ATAGCTATCGTGGAGTTTTCGAGACCCGATGAGGCCCAGAAGGCTTTCAA
GGGACTTGCCTACCGGAAACTCGGAGACTCCATCCTCTTCCTGGAGAAGG
CACCCAAGGATCTGTTTGATGCTGCAGTCGTGCCACAGAAGGCAACGATA
GAGACTAAGGCTGTCTCTCAAGGCTTCTCCACTGCTGACACTTTCGCGGC
AGATGAGGTTGATGACCTTACGCCCACTACAACCCTCTTCGTAAAGAACC
TCAACTTTGCTACTACGAACCAGAGTTTTGTGGACCTCTTCCGGCCACTG
GACGGCTTTGTGTCTGCTAAGATCAAGACGAAGCCTGACCCTAAGCATCC
TGGACAGACGCTCAGCATGGGTTTTGGTTTCGTGGAGTTCAGGTCAAAAG
CCCAGGCTCAATCTGCGCTTGCCGCCATGAATGGCTACAAACTTGATCAG
CATGAACTGGTAGTTAGGGTGTCTCACCGTGGAATGGATGCAGCTGAAGA
GCGGAGACGTGAAGATACCGCGAAGAAGGTTGCAGCCAGAAGGACGAAGA
TCATCATTAAGAACTTGCCGTTCCAGGCCACCAAGAAGGATGTTCGGTCA
CTCTTTGGAGCCTACGGGCAACTTCGCTCTGTGCGGGTTCCTCAGAAGTT
TGATAGATCGGCTCGTGGTTTCGGTTTTGCGGATTTTGTAAGCGCTCGCG
AAGCGGAAAACGCCATGGACGCGTTGAAGAATACCCATCTTCTGGGCAGA
AAGCTGGTCCTGGAGTTTGCAAACGAGGAGGCAATCGATGCCGAGGAAGA
AATCAAGCAGATCGAAAAGAAAGTAGGGGAACAGATGGACAGGGTCAAGC
TACAAAAGCTTGCCGGGCCTGGGCGCAAGAAGTTCACTGTAGGGGCCCAG
GACGGCGAAGAGGACTAAATCCATGTGGCTTTCGATACTAGGGTTAATAC
CAGCAAGGGCTTTGCCTATATTCAGTACCTCGACGCAGATGCGGCCGTAG
AGGCCTACAAGAATCTTGACGGAAAGCACTTCCAAGGTCGCTTGATGCAT
ATTCTGCCAGCAGCTGCAAAGAAGACTTACAAGATTGATGATGCGGAGCT
GGCGAAACTACCCCTGAAAAAGCAAAAGCAGATCAAAAAGAAGATGGATG
CTTCGTCTTCTACGTTTAGCTGGAACTCTCTCTACATGAACATGCAACAT
TCGTCTAAGACCAAGACATGGGCAAATGATGATGTGCCCAAGCCGCCGGA
GAATGACTCACCTGCAGAACAGCCCGCTGAAGTAGAGGAGCAACCTCAGG
AGCTTACCTATGCACAGAGGAAGAAGGCGAAGCTTGGCGAGGAATATGAT
CACTCTAAGGAGATGCACACAGCTGACCGCGAAGCTCATGGATCACCTGA
ACCCATGGTGGTAGACCACAGTGGAGAAGGCAACGCCGAGGCACCGGCAG
AGCAAGATGATACTGTCGCCGAGGCTGAGGCGCCAGCTGTTTCGGATGCG
GACTGGCTCCGCTCCAAGACAAGTCGCCTTCTTGGTCTGCTTGATGAGGA
AGAGCAGGCGGATTTCGACGCTGCTGCGCAGCAGAAGGAATCTGCAGCTC
CAGAAGAAGCAGAGGATCCAGGTGCTGACTCTAGGGATGCCCAGATTGTC
GCTCCCGCAGCGACTGAGGATAAGACGGTTCAGGAGCCGCAGGTCGACAC
GAATATTGAGAATATCCGTCTATCTGCACGTCTGTTCGTGCGAAACCTTG
CTTATGACACCTCGGAGTCAGATCTTGAACCGCTATTTGCTCCCTTCGGA
CGAATTGAAGAGACGGATGCCGTTATGTCTTCAGTAGCTGAGCGACTTGG
TGTTTCCAAAGCAGATCTTTTGGATCCTACTTCATCTGATGCTGCTGTGA
AGCAGGCCCACGCTGAAACCCACGTAATTCAAGAAACGAAAGCTTACTTC
TCAGCTAATGGGGTTAATATCGAAGCCTTCAAGCAGCGGGAGCGTGGAAA
CACTGCTATCCTTGTAAAGAACTTCTCGTACGGCGTCAAGACTGATGAGC
TCAGGAAAATGTTCGAACCATTCGGGCAAATAACGAGGTTACTCATGCCC
CCTAGTGGAACGATAGCTATCGTGGAGTTTTCGAGACCCGATGAGGCCCA
GAAGGCTTTCAAGGGACTTGCCTACCGGAAACTCGGAGACTCCATCCTCT
TCCTGGAGAAGGCACCCAAGGATCTGTTTGATGCTGCAGTCGTGCCACAG
AAGGCAACGATAGAGACTAAGGCTGTCTCTCAAGGCTTCTCCACTGCTGA
CACTTTCGCGGCAGATGAGGTTGATGACCTTACGCCCACTACAACCCTCT
TCGTAAAGAACCTCAACTTTGCTACTACGAACCAGAGTTTTGTGGACCTC
TTCCGGCCACTGGACGGCTTTGTGTCTGCTAAGATCAAGACGAAGCCTGA
CCCTAAGCATCCTGGACAGACGCTCAGCATGGGTTTTGGTTTCGTGGAGT
TCAGGTCAAAAGCCCAGGCTCAATCTGCGCTTGCCGCCATGAATGGCTAC
AAACTTGATCAGCATGAACTGGTAGTTAGGGTGTCTCACCGTGGAATGGA
TGCAGCTGAAGAGCGGAGACGTGAAGATACCGCGAAGAAGGTTGCAGCCA
GAAGGACGAAGATCATCATTAAGAACTTGCCGTTCCAGGCCACCAAGAAG
GATGTTCGGTCACTCTTTGGAGCCTACGGGCAACTTCGCTCTGTGCGGGT
TCCTCAGAAGTTTGATAGATCGGCTCGTGGTTTCGGTTTTGCGGATTTTG
TAAGCGCTCGCGAAGCGGAAAACGCCATGGACGCGTTGAAGAATACCCAT
CTTCTGGGCAGAAAGCTGGTCCTGGAGTTTGCAAACGAGGAGGCAATCGA
TGCCGAGGAAGAAATCAAGCAGATCGAAAAGAAAGTAGGGGAACAGATGG
ACAGGGTCAAGCTACAAAAGCTTGCCGGGCCTGGGCGCAAGAAGTTCACT
GTAGGGGCCCAGGACGGCGAAGAGGACTAAATCCATGTGGCTTTCGATAC
TAGGGTTAATACCAGCAAGGGCTTTGCCTATATTCAGTACCTCGACGCAG
ATGCGGCCGTAGAGGCCTACAAGAATCTTGACGGAAAGCACTTCCAAGGT
CGCTTGATGCATATTCTGCCAGCAGCTGCAAAGAAGACTTACAAGATTGA
TGATGCGGAGCTGGCGAAACTACCCCTGAAAAAGCAAAAGCAGATCAAAA
AGAAGATGGATGCTTCGTCTTCTACGTTTAGCTGGAACTCTCTCTACATG
AACATGCAACATTCGTCTAAGACCAAGACATGGGCAAATGATGATGTGCC
CAAGCCGCCGGAGAATGACTCACCTGCAGAACAGCCCGCTGAAGTAGAGG
AGCAACCTCAGGAGCTTACCTATGCACAGAGGAAGAAGGCGAAGCTTGGC
GAGGAATATGATCACTCTAAGGAGATGCACACAGCTGACCGCGAAGCTCA
TGGATCACCTGAACCCATGGTGGTAGACCACAGTGGAGAAGGCAACGCCG
AGGCACCGGCAGAGCAAGATGATACTGTCGCCGAGGCTGAGGCGCCAGCT
GTTTCGGATGCGGACTGGCTCCGCTCCAAGACAAGTCGCCTTCTTGGTCT
GCTTGATGAGGAAGAGCAGGCGGATTTCGACGCTGCTGCGCAGCAGAAGG
AATCTGCAGCTCCAGAAGAAGCAGAGGATCCAGGTGCTGACTCTAGGGAT
GCCCAGATTGTCGCTCCCGCAGCGACTGAGGATAAGACGGTTCAGGAGCC
GCAGGTCGACACGAATATTGAGAATATCCGTCTATCTGCACGTCTGTTCG
TGCGAAACCTTGCTTATGACACCTCGGAGTCAGATCTTGAACCGCTATTT
GCTCCCTTCGGACGAATTGAAGAGACGGATGCCGTTATGTCTTCAGTAGC
TGAGCGACTTGGTGTTTCCAAAGCAGATCTTTTGGATCCTACTTCATCTG
ATGCTGCTGTGAAGCAGGCCCACGCTGAAACCCACGTAATTCAAGAAACG
AAAGCTTACTTCTCAGCTAATGGGGTTAATATCGAAGCCTTCAAGCAGCG
GGAGCGTGGAAACACTGCTATCCTTGTAAAGAACTTCTCGTACGGCGTCA
AGACTGATGAGCTCAGGAAAATGTTCGAACCATTCGGGCAAATAACGAGG
TTACTCATGCCCCCTAGTGGAACGATAGCTATCGTGGAGTTTTCGAGACC
CGATGAGGCCCAGAAGGCTTTCAAGGGACTTGCCTACCGGAAACTCGGAG
ACTCCATCCTCTTCCTGGAGAAGGCACCCAAGGATCTGTTTGATGCTGCA
GTCGTGCCACAGAAGGCAACGATAGAGACTAAGGCTGTCTCTCAAGGCTT
CTCCACTGCTGACACTTTCGCGGCAGATGAGGTTGATGACCTTACGCCCA
CTACAACCCTCTTCGTAAAGAACCTCAACTTTGCTACTACGAACCAGAGT
TTTGTGGACCTCTTCCGGCCACTGGACGGCTTTGTGTCTGCTAAGATCAA
GACGAAGCCTGACCCTAAGCATCCTGGACAGACGCTCAGCATGGGTTTTG
GTTTCGTGGAGTTCAGGTCAAAAGCCCAGGCTCAATCTGCGCTTGCCGCC
ATGAATGGCTACAAACTTGATCAGCATGAACTGGTAGTTAGGGTGTCTCA
CCGTGGAATGGATGCAGCTGAAGAGCGGAGACGTGAAGATACCGCGAAGA
AGGTTGCAGCCAGAAGGACGAAGATCATCATTAAGAACTTGCCGTTCCAG
GCCACCAAGAAGGATGTTCGGTCACTCTTTGGAGCCTACGGGCAACTTCG
CTCTGTGCGGGTTCCTCAGAAGTTTGATAGATCGGCTCGTGGTTTCGGTT
TTGCGGATTTTGTAAGCGCTCGCGAAGCGGAAAACGCCATGGACGCGTTG
AAGAATACCCATCTTCTGGGCAGAAAGCTGGTCCTGGAGTTTGCAAACGA
GGAGGCAATCGATGCCGAGGAAGAAATCAAGCAGATCGAAAAGAAAGTAG
GGGAACAGATGGACAGGGTCAAGCTACAAAAGCTTGCCGGGCCTGGGCGC
AAGAAGTTCACTGTAGGGGCCCAGGACGGCGAAGAGGACTAAATCCATGT
GGCTTTCGATACTAGGGTTAATACCAGCAAGGGCTTTGCCTATATTCAGT
ACCTCGACGCAGATGCGGCCGTAGAGGCCTACAAGAATCTTGACGGAAAG
CACTTCCAAGGTCGCTTGATGCATATTCTGCCAGCAGCTGCAAAGAAGAC
TTACAAGATTGATGATGCGGAGCTGGCGAAACTACCCCTGAAAAAGCAAA
AGCAGATCAAAAAGAAGATGGATGCTTCGTCTTCTACGTTTAGCTGGAAC
TCTCTCTACATGAACATGCAACATTCGTCTAAGACCAAGACATGGGCAAA
TGATGATGTGCCCAAGCCGCCGGAGAATGACTCACCTGCAGAACAGCCCG
CTGAAGTAGAGGAGCAACCTCAGGAGCTTACCTATGCACAGAGGAAGAAG
GCGAAGCTTGGCGAGGAATATGATCACTCTAAGGAGATGCACACAGCTGA
CCGCGAAGCTCATGGATCACCTGAACCCATGGTGGTAGACCACAGTGGAG
AAGGCAACGCCGAGGCACCGGCAGAGCAAGATGATACTGTCGCCGAGGCT
GAGGCGCCAGCTGTTTCGGATGCGGACTGGCTCCGCTCCAAGACAAGTCG
CCTTCTTGGTCTGCTTGATGAGGAAGAGCAGGCGGATTTCGACGCTGCTG
CGCAGCAGAAGGAATCTGCAGCTCCAGAAGAAGCAGAGGATCCAGGTGCT
GACTCTAGGGATGCCCAGATTGTCGCTCCCGCAGCGACTGAGGATAAGAC
GGTTCAGGAGCCGCAGGTCGACACGAATATTGAGAATATCCGTCTATCTG
CACGTCTGTTCGTGCGAAACCTTGCTTATGACACCTCGGAGTCAGATCTT
GAACCGCTATTTGCTCCCTTCGGACGAATTGAAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010138-T2.utr3p1 | KJC3_010138-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034482 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF13893 |
| DBxref | PFAM:PF00076 |
| Product | variant 2 |
| Product | Multiple RNA-binding domain-containing protein 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2446899..2450261 - |
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