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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2481239..2484753+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010151-T1 ID=KJC3_010151-T1|Name=KJC3_010151-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3515bp|location=Sequence derived from alignment at ch7:2481239..2484753+ (Aspergillus niger KJC3)
GTTACTTTGATCGAGAGCGACTCGATTTGCCATCTAAAATTTCTGCCTAA
GGTGTCAAACCCCTTCCCGTTGCACGGGCAACGAAGCGTCAACATCGCGT
CTCCATACCTGAGACCCATCCTCGACCAAACTTTCTATGACTTAGCCTCG
ATCTCGCCCCCGAAGCTTGACAGGTCATCCCATCTCATAACTTGAAGGCC
TTCTATCCTTTCTGCCAATTAAACCATAGCTCCCATCCGACAATTGAACC
GCCGACACGCCATACAGGAGTCGGGGGAGTTATCTACGAGATATCCACAT
GGAATAGAGGCACTGCCTAAACATCCAGTTTACTTCAAAGGGGTTCTCCT
TGCATTTTCTCAATATGTCCGGCTTTCTGTACGAAGCTACGACCCCGTGC
CCTTCAAGGACGAGCGCTTCAATCTTCAGCCGCGGTAGCGACAGATGCTC
GTCCGACAGCATGTGGGAAGATAGCCTGGGCAACTGGGACGATACTGCTA
ATGTCGAGTTCACGACCGAAATCAAACAGTCAGTTCTCACAGGGGCAAAG
CCCAGACGAAGAACTAAGACAAGTACATCTTTTGCTATTCACGAAGACCT
TGGAGGGAAACCTACACAGCCCACATACAAACCGAAGCGGGATTCAAGTA
TAGCAGCACCAACCACGAGCCGCAAGACATCCTTACTTGCGCAGCCAGCT
CAGAGATTTCGTCCCAAAGTCAGCTTCGGTCCGAGTCCAGACACGCAGTT
GCGACAAGAAGGGTTGGCTCACAAGTCAACAACTAAGAGAACGGACACAG
AGAAGAACAACGCGCTTTTAATGCGGATAAATGGAGCAGATGGTCAGGGG
AAAGTAAAGGAAAGCCTCAAAATGGATGTGCGCCGTAATACGGTTTATAT
TCCCCCGGATGATGGTACAGTGGCCAGCGTTTTCATGGGTCTCTTTAGCC
CGCTCAAATCGGACGACTTTGAGAAGTGTATGAATGAAGATACTCAAGTC
AACAGCTTGGAGTCACAAATTGCCAGGAAGCGACAAGCTAAGCGGTCTCT
CGCCTCGTCTGCCCAACGGGCCCCATTACGACCCAGCTCTAAAGTAATGC
AGGAGTCCTGCATTCATCACGATATTGCCGGGAAGAATGGCGGAAAGGAA
AATGTACCTCCAGGAACAGTCATAGCTGAAGGCAAGAAAGGAAATCAGCC
CTTAAAAATCAAGGGGGATTTGGGAAGCCGCCTTAATGCTCCTCCGATGG
CGGCTAGAAGAGCTGGTGCTACAAACGCCCCTGCGAAGCCTACATCCAAG
CCTCTATCTACCAAGACAAACAACACACTTCATAGGAGCAATGTACTGAG
CAACAGCCAGAACAGCACTAAATCACAACAGAACAAACCCGAGCACAATC
GTACCATGAAGCCAAGTTTGACATCAGAATACAACCGACTCGGTTCTATG
CGAAGCCCAAACTCATCTACACCCCGAAAGCCATCGAAAACAAGCACAAT
ACTCAAGCCAACTACTTCGCGCAGTAATGTGAAGCCTATCGCAAAGGAAT
GTCCAATTATTCTTGACAGCATCACAAACCCGGCACTGTACGAAGAGAAT
TGGCTCTCGCACCAGGAGGTGGCAATAACACAGTTGGTGAATGAATTGCT
CCGATGTACTTATGAGGAGTCGGAGATTGACAACCATACCATGCTTCGAC
ATGAGCTCCTCGCCTTGTACCAGGGAGAATCTTTTGCATACCTCCACAAA
CGTCTCCAAGCATCATTGTTATACGGCGCAATGAGTATACCGAAAGACGT
ACTCATGCGCAGTAGCCGTCTTCACAATGATCTGGGCTTAAAACGAAAGT
TTTTGGATATTTGGATCAAGACCTACGATCCACGAGCATTGCGAGCCGCA
TTGGAAGCAGTCACTGGAAGGAAGATACCTACCCCCAAGTTGGTTCATGA
AAGCGATACCTCGGATAACGACAAGGCGATGAAACGCAGGTTGGAAGGAT
TTCTAGACGCATTCTTGTTACAAAACCAGGATATTAACCATCAAGAAAAG
ACCTGTGTTGGAGAGGATGGCGGTGCAGCTGGCCGGACCTACCGTCGGAC
TGTTCTTCGAAGCATAATGATGGTCATCCTTCTGGACAAGGCAAGAATGT
GTCAAGGGACCGCCGTTCCCCGACGCCTTTTCCTCTCTTCGTCACCCGTC
AAGTCCTCCGTTGCAGTTCTCCAGGCACTGGGTCGGTTTCTGCTGCCATC
ATGCGGAGATATGATCAAAGCATTGAGCCATCTGGACTGTGAACTGAGTT
ATGAGCAGCATCCATTGGAGGAATATGACTACCGGGTCGACAACCTTGCT
GTAGATCTCCGGGACGGTGTGAGGTTGACAAGGGTTGTGGAAATGTTACT
CTATCCTTCAACCTCATCCGGTGAACTGTCGAACGGAAGTTTCCCGCTTT
CGAGTCATCTGAAGTTCCCATGCAGAAGTCGCGCAGTAAAGCTTTTCAAC
ATCAAAATTGCCCTGGATGCGCTAGCTTCTGAACCAGGAACAAGGAAGCT
CGCGAAAGACATACGCGCGGAAGACATCGTCGACGGACATCGCGAGAAGA
CTATTGCGTTGTTGTGGAAGCTGGTCAGCACATGGGGTCTTGCTGGATTG
GTGGACTGGACAGAAGTCAGGAAGGAGATTGAAAGACTCAGGCAGAAAGC
CGCTCTTCACGCTGGTCACGGGGATGCTGAGGACAATATTTGGCACGACA
TGTGCATAAACAGGAACGACGAGAGCGACGAACCAACCTTGCTGCTTAAG
CAATGGGCATCTACTCTAGCACATCTGAAGGGCGTACCACTCGACAATCT
AAGCACTAGCTTTAGCGATGGCAAGATATACGAAAGTATCATTGACGAAT
ACGAGGGATATATCGTGGATCGCCCCGAGAGTTATAGCAGAACAGCATCT
CTAGAGTCGCGCCTTCGAGCACTGGGATGCAGTGCACAATTCGGTGAGTT
TACCAAAGACCTTACTCCCTTCACAGCGACTAACATTGACCAGCCAAACT
CGTGGCCCCCTCTTCGGAGACTCGTATCGTCGATAGCGATTTTACAATCG
GAGCACTCGCGTTCCTTTGTTCGCGGCTTCTGCCCGCTACGAAACGCGCG
CGAGCCGCGACAGTACTTCAGTCGGCATGGCGACGGATCCTTACGCGTCG
AGACGATGAGCGCCGAGCCGTCGCAAGGGACATTGCCAGACAATGCGCCG
CAGTTGTACAAACTCAGCACCGGATCCTATGGGCGAAGGAAGTGATTGTG
CGATGGTGGAGGCAGACTCGGGCTCAACAGCGTCGCCGAGCAGTTGCTAC
GCAGGCTCACAAGGACAAACGATATCTATGAACGCAAGTCACCATATTAT
GATAGGGATTATTGCATTGTTCAGGCGTTTATCTACAGACCAGAAGGTCT
CCAAGTTTAGCACTATTGTCTAATTCATGTATTCCAACACTAATACATCA
TACCAATCACACAGC back to topCoding sequence (CDS) from alignment at ch7:2481239..2484753+ >KJC3_010151-T1 ID=KJC3_010151-T1|Name=KJC3_010151-T1|organism=Aspergillus niger KJC3|type=CDS|length=5934bp|location=Sequence derived from alignment at ch7:2481239..2484753+ (Aspergillus niger KJC3)
ATGTCCGGCTTTCTGTACGAAGCTACGACCCCGTGCCCTTCAAGGACGAG
CGCTTCAATCTTCAGCCGCGGTAGCGACAGATGCTCGTCCGACAGCATGT
GGGAAGATAGCCTGGGCAACTGGGACGATACTGCTAATGTCGAGTTCACG
ACCGAAATCAAACAGTCAGTTCTCACAGGGGCAAAGCCCAGACGAAGAAC
TAAGACAAGTACATCTTTTGCTATTCACGAAGACCTTGGAGGGAAACCTA
CACAGCCCACATACAAACCGAAGCGGGATTCAAGTATAGCAGCACCAACC
ACGAGCCGCAAGACATCCTTACTTGCGCAGCCAGCTCAGAGATTTCGTCC
CAAAGTCAGCTTCGGTCCGAGTCCAGACACGCAGTTGCGACAAGAAGGGT
TGGCTCACAAGTCAACAACTAAGAGAACGGACACAGAGAAGAACAACGCG
CTTTTAATGCGGATAAATGGAGCAGATGGTCAGGGGAAAGTAAAGGAAAG
CCTCAAAATGGATGTGCGCCGTAATACGGTTTATATTCCCCCGGATGATG
GTACAGTGGCCAGCGTTTTCATGGGTCTCTTTAGCCCGCTCAAATCGGAC
GACTTTGAGAAGTGTATGAATGAAGATACTCAAGTCAACAGCTTGGAGTC
ACAAATTGCCAGGAAGCGACAAGCTAAGCGGTCTCTCGCCTCGTCTGCCC
AACGGGCCCCATTACGACCCAGCTCTAAAGTAATGCAGGAGTCCTGCATT
CATCACGATATTGCCGGGAAGAATGGCGGAAAGGAAAATGTACCTCCAGG
AACAGTCATAGCTGAAGGCAAGAAAGGAAATCAGCCCTTAAAAATCAAGG
GGGATTTGGGAAGCCGCCTTAATGCTCCTCCGATGGCGGCTAGAAGAGCT
GGTGCTACAAACGCCCCTGCGAAGCCTACATCCAAGCCTCTATCTACCAA
GACAAACAACACACTTCATAGGAGCAATGTACTGAGCAACAGCCAGAACA
GCACTAAATCACAACAGAACAAACCCGAGCACAATCGTACCATGAAGCCA
AGTTTGACATCAGAATACAACCGACTCGGTTCTATGCGAAGCCCAAACTC
ATCTACACCCCGAAAGCCATCGAAAACAAGCACAATACTCAAGCCAACTA
CTTCGCGCAGTAATGTGAAGCCTATCGCAAAGGAATGTCCAATTATTCTT
GACAGCATCACAAACCCGGCACTGTACGAAGAGAATTGGCTCTCGCACCA
GGAGGTGGCAATAACACAGTTGGTGAATGAATTGCTCCGATGTACTTATG
AGGAGTCGGAGATTGACAACCATACCATGCTTCGACATGAGCTCCTCGCC
TTGTACCAGGGAGAATCTTTTGCATACCTCCACAAACGTCTCCAAGCATC
ATTGTTATACGGCGCAATGAGTATACCGAAAGACGTACTCATGCGCAGTA
GCCGTCTTCACAATGATCTGGGCTTAAAACGAAAGTTTTTGGATATTTGG
ATCAAGACCTACGATCCACGAGCATTGCGAGCCGCATTGGAAGCAGTCAC
TGGAAGGAAGATACCTACCCCCAAGTTGGTTCATGAAAGCGATACCTCGG
ATAACGACAAGGCGATGAAACGCAGGTTGGAAGGATTTCTAGACGCATTC
TTGTTACAAAACCAGGATATTAACCATCAAGAAAAGACCTGTGTTGGAGA
GGATGGCGGTGCAGCTGGCCGGACCTACCGTCGGACTGTTCTTCGAAGCA
TAATGATGGTCATCCTTCTGGACAAGGCAAGAATGTGTCAAGGGACCGCC
GTTCCCCGACGCCTTTTCCTCTCTTCGTCACCCGTCAAGTCCTCCGTTGC
AGTTCTCCAGGCACTGGGTCGGTTTCTGCTGCCATCATGCGGAGATATGA
TCAAAGCATTGAGCCATCTGGACTGTGAACTGAGTTATGAGCAGCATCCA
TTGGAGGAATATGACTACCGGGTCGACAACCTTGCTGTAGATCTCCGGGA
CGGTGTGAGGTTGACAAGGGTTGTGGAAATGTTACTCTATCCTTCAACCT
CATCCGGTGAACTGTCGAACGGAAGTTTCCCGCTTTCGAGTCATCTGAAG
TTCCCATGCAGAAGTCGCGCAGTAAAGCTTTTCAACATCAAAATTGCCCT
GGATGCGCTAGCTTCTGAACCAGGAACAAGGAAGCTCGCGAAAGACATAC
GCGCGGAAGACATCGTCGACGGACATCGCGAGAAGACTATTGCGTTGTTG
TGGAAGCTGGTCAGCACATGGGGTCTTGCTGGATTGGTGGACTGGACAGA
AGTCAGGAAGGAGATTGAAAGACTCAGGCAGAAAGCCGCTCTTCACGCTG
GTCACGGGGATGCTGAGGACAATATTTGGCACGACATGTGCATAAACAGG
AACGACGAGAGCGACGAACCAACCTTGCTGCTTAAGCAATGGGCATCTAC
TCTAGCACATCTGAAGGGCGTACCACTCGACAATCTAAGCACTAGCTTTA
GCGATGGCAAGATATACGAAAGTATCATTGACGAATACGAGGGATATATC
GTGGATCGCCCCGAGAGTTATAGCAGAACAGCATCTCTAGAGTCGCGCCT
TCGAGCACTGGGATGCAGTGCACAATTCGCCAAACTCGTGGCCCCCTCTT
CGGAGACTCGTATCGTCGATAGCGATTTTACAATCGGAGCACTCGCGTTC
CTTTGTTCGCGGCTTCTGCCCGCTACGAAACGCGCGCGAGCCGCGACAGT
ACTTCAGTCGGCATGGCGACGGATCCTTACGCGTCGAGACGATGAGCGCC
GAGCCGTCGCAAGGGACATTGCCAGACAATGCGCCGCAGTTGTACAAACT
CAGCACCGGATCCTATGGGCGAAGGAAGTGATTGTGCGATGGTGGAGGCA
GACTCGGGCTCAACAGCGTCGCCGAGCAGTTGCTACGCAGGCTCACAAGG
ACAAACGATATCTATGAATGTCCGGCTTTCTGTACGAAGCTACGACCCCG
TGCCCTTCAAGGACGAGCGCTTCAATCTTCAGCCGCGGTAGCGACAGATG
CTCGTCCGACAGCATGTGGGAAGATAGCCTGGGCAACTGGGACGATACTG
CTAATGTCGAGTTCACGACCGAAATCAAACAGTCAGTTCTCACAGGGGCA
AAGCCCAGACGAAGAACTAAGACAAGTACATCTTTTGCTATTCACGAAGA
CCTTGGAGGGAAACCTACACAGCCCACATACAAACCGAAGCGGGATTCAA
GTATAGCAGCACCAACCACGAGCCGCAAGACATCCTTACTTGCGCAGCCA
GCTCAGAGATTTCGTCCCAAAGTCAGCTTCGGTCCGAGTCCAGACACGCA
GTTGCGACAAGAAGGGTTGGCTCACAAGTCAACAACTAAGAGAACGGACA
CAGAGAAGAACAACGCGCTTTTAATGCGGATAAATGGAGCAGATGGTCAG
GGGAAAGTAAAGGAAAGCCTCAAAATGGATGTGCGCCGTAATACGGTTTA
TATTCCCCCGGATGATGGTACAGTGGCCAGCGTTTTCATGGGTCTCTTTA
GCCCGCTCAAATCGGACGACTTTGAGAAGTGTATGAATGAAGATACTCAA
GTCAACAGCTTGGAGTCACAAATTGCCAGGAAGCGACAAGCTAAGCGGTC
TCTCGCCTCGTCTGCCCAACGGGCCCCATTACGACCCAGCTCTAAAGTAA
TGCAGGAGTCCTGCATTCATCACGATATTGCCGGGAAGAATGGCGGAAAG
GAAAATGTACCTCCAGGAACAGTCATAGCTGAAGGCAAGAAAGGAAATCA
GCCCTTAAAAATCAAGGGGGATTTGGGAAGCCGCCTTAATGCTCCTCCGA
TGGCGGCTAGAAGAGCTGGTGCTACAAACGCCCCTGCGAAGCCTACATCC
AAGCCTCTATCTACCAAGACAAACAACACACTTCATAGGAGCAATGTACT
GAGCAACAGCCAGAACAGCACTAAATCACAACAGAACAAACCCGAGCACA
ATCGTACCATGAAGCCAAGTTTGACATCAGAATACAACCGACTCGGTTCT
ATGCGAAGCCCAAACTCATCTACACCCCGAAAGCCATCGAAAACAAGCAC
AATACTCAAGCCAACTACTTCGCGCAGTAATGTGAAGCCTATCGCAAAGG
AATGTCCAATTATTCTTGACAGCATCACAAACCCGGCACTGTACGAAGAG
AATTGGCTCTCGCACCAGGAGGTGGCAATAACACAGTTGGTGAATGAATT
GCTCCGATGTACTTATGAGGAGTCGGAGATTGACAACCATACCATGCTTC
GACATGAGCTCCTCGCCTTGTACCAGGGAGAATCTTTTGCATACCTCCAC
AAACGTCTCCAAGCATCATTGTTATACGGCGCAATGAGTATACCGAAAGA
CGTACTCATGCGCAGTAGCCGTCTTCACAATGATCTGGGCTTAAAACGAA
AGTTTTTGGATATTTGGATCAAGACCTACGATCCACGAGCATTGCGAGCC
GCATTGGAAGCAGTCACTGGAAGGAAGATACCTACCCCCAAGTTGGTTCA
TGAAAGCGATACCTCGGATAACGACAAGGCGATGAAACGCAGGTTGGAAG
GATTTCTAGACGCATTCTTGTTACAAAACCAGGATATTAACCATCAAGAA
AAGACCTGTGTTGGAGAGGATGGCGGTGCAGCTGGCCGGACCTACCGTCG
GACTGTTCTTCGAAGCATAATGATGGTCATCCTTCTGGACAAGGCAAGAA
TGTGTCAAGGGACCGCCGTTCCCCGACGCCTTTTCCTCTCTTCGTCACCC
GTCAAGTCCTCCGTTGCAGTTCTCCAGGCACTGGGTCGGTTTCTGCTGCC
ATCATGCGGAGATATGATCAAAGCATTGAGCCATCTGGACTGTGAACTGA
GTTATGAGCAGCATCCATTGGAGGAATATGACTACCGGGTCGACAACCTT
GCTGTAGATCTCCGGGACGGTGTGAGGTTGACAAGGGTTGTGGAAATGTT
ACTCTATCCTTCAACCTCATCCGGTGAACTGTCGAACGGAAGTTTCCCGC
TTTCGAGTCATCTGAAGTTCCCATGCAGAAGTCGCGCAGTAAAGCTTTTC
AACATCAAAATTGCCCTGGATGCGCTAGCTTCTGAACCAGGAACAAGGAA
GCTCGCGAAAGACATACGCGCGGAAGACATCGTCGACGGACATCGCGAGA
AGACTATTGCGTTGTTGTGGAAGCTGGTCAGCACATGGGGTCTTGCTGGA
TTGGTGGACTGGACAGAAGTCAGGAAGGAGATTGAAAGACTCAGGCAGAA
AGCCGCTCTTCACGCTGGTCACGGGGATGCTGAGGACAATATTTGGCACG
ACATGTGCATAAACAGGAACGACGAGAGCGACGAACCAACCTTGCTGCTT
AAGCAATGGGCATCTACTCTAGCACATCTGAAGGGCGTACCACTCGACAA
TCTAAGCACTAGCTTTAGCGATGGCAAGATATACGAAAGTATCATTGACG
AATACGAGGGATATATCGTGGATCGCCCCGAGAGTTATAGCAGAACAGCA
TCTCTAGAGTCGCGCCTTCGAGCACTGGGATGCAGTGCACAATTCGCCAA
ACTCGTGGCCCCCTCTTCGGAGACTCGTATCGTCGATAGCGATTTTACAA
TCGGAGCACTCGCGTTCCTTTGTTCGCGGCTTCTGCCCGCTACGAAACGC
GCGCGAGCCGCGACAGTACTTCAGTCGGCATGGCGACGGATCCTTACGCG
TCGAGACGATGAGCGCCGAGCCGTCGCAAGGGACATTGCCAGACAATGCG
CCGCAGTTGTACAAACTCAGCACCGGATCCTATGGGCGAAGGAAGTGATT
GTGCGATGGTGGAGGCAGACTCGGGCTCAACAGCGTCGCCGAGCAGTTGC
TACGCAGGCTCACAAGGACAAACGATATCTATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010151-T1.utr5p1 | KJC3_010151-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010151-T1.utr3p1 | KJC3_010151-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000048 |
| DBxref | InterPro:IPR001715 |
| DBxref | InterPro:IPR036872 |
| DBxref | PFAM:PF00307 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2481239..2484753 + |
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