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KJC3_010166-T1, KJC3_010166-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010166-T1
Unique NameKJC3_010166-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2539715..2541478+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010166-T1 ID=KJC3_010166-T1|Name=KJC3_010166-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1764bp|location=Sequence derived from alignment at ch7:2539715..2541478+ (Aspergillus niger KJC3)
CGAACTTCATCGTCACGATTCAGATCGGACAACCACGAAAGTCGAAACAT
TTCACTTGCCCTTAAACATCCTATCTTCAGCGAATTAAGGAGACATGGGG
GGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCT
CGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCAGCTCTC
AGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTG
ATGGGTAAGAACACCATGGTATGATGATCCTCTGAAACCACCGGTGCCCG
TTCCGCATGCTGATGAGTTGTCCAGGTTCGCCGTGCCATCAAGGGCTTCG
TCAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGGTAAG
TGAAGTTGCTTCCAGAGTCTGCGGCGATGTCAATTGGCTAACATTTGCCT
TCCGCACAGGTAACGTTGGTTTCATCTTCACCAACGGTGACCTCAAGGCC
ACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTCCCGCTCGTGCCGG
TGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGTAACACCGGTATGG
AACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGTCCCCACCAAGATT
GCTCGTGGTACCATTGAAATTACCACCGACCTCAAGCTCGTTGAGGCTGG
AAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAACATGCTGAACATCT
CTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTACGACCAGGGTCAG
TGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTCAGCTCCTCGAGGC
CTTCTCCAGCGCCATTAACACCATCACCACCATCTCCCTGGCTGTCAGCT
ACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAACAGCTACAAGAAG
GTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGCCCGAGATTGAGGA
GCTCAAGGACCGTATTGCCAACCCTGACGCTTACGCCTCCGCTGCTCCTG
CCGCTGCCGCTGCCCCTGCTGCCGGTGGTGCTCCCGCCGCTGAGGCTCCC
AAGGAGGAAGAGGAGGAGTCCGATGAGGACATGGGCTTCGGCCTCTTCGA
CTAAACGTCTCGTGTAAATGCTGCACGGGATACGACTGCCATGTATTAGA
TACTTTTCTTGCCGGTCTTGACGATTGGGTAAATGAAAATGATTGTCATG
GTCATGAAACAATGATCTTCTTTCATCTAGATAGGGACGTAGTCGCGTTC
CCTGATCTGATGAACTGAAAAAGGTGAGCTTCAATCATTTGGTTTTCCTT
GCTTCGCATACATGCCCACTCCCCGGTGATATGATGATACATTTTTAACC
CAGAGCTACTTGCTTTGACGAACAAAAACAGCAACAACAAACACTCTAAT
TTTTTGCTGACACCATTCCATTCAACTTGCCATTTGTCACGCATTACTTT
CAATGGTCTGATAGCTAACAGCTTTCAGGTTCACAGATTCAATGTAGCCC
CGGACGTAAGGCCGTCGCGCTGTTCATTACCTCAGAGGCTTGTCCTGGGG
TTTGTGTTCAAGTAGCGACTAGAAGAGCGTAGTACTTGAGGCTGTTGTTT
GTTGCGAAGGATTTGTGGGGCATTGTATTGGTCGTCGCTGTCGGGACGCG
AGGGAGGAATATTCTCGGTACTTAATAGCACATACATGTCAATAAAATCA
ACATCGCATTGCCT
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Coding sequence (CDS) from alignment at ch7:2539715..2541478+

>KJC3_010166-T1 ID=KJC3_010166-T1|Name=KJC3_010166-T1|organism=Aspergillus niger KJC3|type=CDS|length=2817bp|location=Sequence derived from alignment at ch7:2539715..2541478+ (Aspergillus niger KJC3)
ATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGC
CCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCA
GCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTC
GTCCTGATGGGTAAGAACACCATGGTTCGCCGTGCCATCAAGGGCTTCGT
CAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGGTAACG
TTGGTTTCATCTTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATC
CTGGCCAACCGTGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGG
CGATGTCTGGGTCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCT
CTTTCTTCCAGGCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATT
GAAATTACCACCGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCC
CTCCGAGGCCACCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATG
GTATGACCATCCAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCT
GTCCTGGACATTGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCAT
TAACACCATCACCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCG
CTGTCATGCACTCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCT
GTTGAGACCGAGTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTAT
TGCCAACCCTGACGCTTACGCCTCCGCTGCTCCTGCCGCTGCCGCTGCCC
CTGCTGCCGGTGGTGCTCCCGCCGCTGAGGCTCCCAAGGAGGAAGAGGAG
GAGTCCGATGAGGACATGGGCTTCGGCCTCTTCGACTAAATGGGGGGCAA
GTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCTCGATG
AGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCAGCTCTCAGCAG
ATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTGATGGG
TAAGAACACCATGGTTCGCCGTGCCATCAAGGGCTTCGTCAACGACAACC
CCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGGTAACGTTGGTTTCATC
TTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACCG
TGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGGG
TCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCAG
GCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCAC
CGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCA
CCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATGGTATGACCATC
CAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACAT
TGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATCA
CCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCAC
TCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCGA
GTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTATTGCCAACCCTG
ACGCTTACGCCTCCGCTGCTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGT
GGTGCTCCCGCCGCTGAGGCTCCCAAGGAGGAAGAGGAGGAGTCCGATGA
GGACATGGGCTTCGGCCTCTTCGACTAAATGGGGGGCAAGTCTGCTACCA
AGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCTCGATGAGTACAAGACG
GTCTTCATTGTCGGTGTCGACAATGTCAGCTCTCAGCAGATGCACGAGAT
TCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTGATGGGTAAGAACACCA
TGGTTCGCCGTGCCATCAAGGGCTTCGTCAACGACAACCCCGAGTACGAG
CGTCTGCTCCCCTTCGTTAAGGGTAACGTTGGTTTCATCTTCACCAACGG
TGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTC
CCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGT
AACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGT
CCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAAGC
TCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAAC
ATGCTGAACATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTA
CGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTC
AGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCTCC
CTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAA
CAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGC
CCGAGATTGAGGAGCTCAAGGACCGTATTGCCAACCCTGACGCTTACGCC
TCCGCTGCTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGTGGTGCTCCCGC
CGCTGAGGCTCCCAAGGAGGAAGAGGAGGAGTCCGATGAGGACATGGGCT
TCGGCCTCTTCGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
60SKJC3_010166Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010166-T1KJC3_010166-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010166-T1.utr5p1KJC3_010166-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010166-T1.exon1KJC3_010166-T1.exon1Aspergillus niger KJC3exon
KJC3_010166-T1.exon2KJC3_010166-T1.exon2Aspergillus niger KJC3exon
KJC3_010166-T1.exon3KJC3_010166-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010166-T1.cdsKJC3_010166-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010166-T1.utr3p1KJC3_010166-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264G1I
DBxrefInterPro:IPR043141
DBxrefInterPro:IPR040637
DBxrefInterPro:IPR030670
DBxrefInterPro:IPR043164
DBxrefInterPro:IPR001790
DBxrefPFAM:PF17777
DBxrefPFAM:PF00466
DBxrefPFAM:PF00428
Product60s acidic ribosomal protein P2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2539715..2541478 +
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