|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2543057..2543883- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010168-T1 ID=KJC3_010168-T1|Name=KJC3_010168-T1|organism=Aspergillus niger KJC3|type=mRNA|length=827bp|location=Sequence derived from alignment at ch7:2543057..2543883- (Aspergillus niger KJC3)
TAACAACGTCCTCTATCAGTCTCAATGACAGCAGCTATCTTGTTATCATG
GAGCTCCGCACGTCCAGCCCGATGCGGGTCAGTCCGGCAGTTAACCACAC
AGAGTTTGCTCCGTCTTGATGCTACCCCATCTTTCTATCTCTCTCCCAAT
TACCCCTCCAATCGCTCTATATTTCATATCTCAATACAGCATACAACAAG
CACATACCATCATGGAGACCGATCCCGGATTCATCGCTGCTGTGGAAGAA
GCCAAGCAAGGCGCTGCTGAGGGTGGTGTGCCCATTGGAGCTTGTTTGGT
CTCCAAGGATGGCAAGATTCTAGGCCGCGGCCACAATATGCGCGTCCAGA
AGGGTAGTCCCGTGTTGCATGTTCGTTGATCCCATCCCTTGCCTTCTGAG
GGTCGTCTGGGGTTCTAATTCTAATCTCTACCGTCATAGGCTGAGATGTC
CGCGCTCGAGAACTCCGGTCGTCTGCCCGCTTCGGCCTACGAAGGCGCTA
CTATGTACACGACCCTGTCGCCATGCGACATGTGCACCGGTGCCTGCATC
CTCTACAAGGTTAAGCGCGTTGTTGTGGGCGAGAACAAGAGCTTCATGGG
TGGCGAGGACTATCTTAAGAGCCGTGGGAAGGAGGTTGTGGTTTTGGATA
ATGCAGAGTGTAAGCAGCTGATGGAGAAGTTCATGAAGGAGAAGCCGGAG
CTTTGGTAGGTTTCCCATGCATCTCACTGGACTGGTCTAGTCTTTTGTTG
GAATGTACGCTGACTGTACGATGTCTTTGCAGGAATGAGGACATTTCCGT
CTGAGCTTTTGAATTCGTGAAGGTGTC back to topCoding sequence (CDS) from alignment at ch7:2543057..2543883- >KJC3_010168-T1 ID=KJC3_010168-T1|Name=KJC3_010168-T1|organism=Aspergillus niger KJC3|type=CDS|length=1620bp|location=Sequence derived from alignment at ch7:2543057..2543883- (Aspergillus niger KJC3)
GAATGAGGACATTTCCGTCTGAGCTGAGATGTCCGCGCTCGAGAACTCCG
GTCGTCTGCCCGCTTCGGCCTACGAAGGCGCTACTATGTACACGACCCTG
TCGCCATGCGACATGTGCACCGGTGCCTGCATCCTCTACAAGGTTAAGCG
CGTTGTTGTGGGCGAGAACAAGAGCTTCATGGGTGGCGAGGACTATCTTA
AGAGCCGTGGGAAGGAGGTTGTGGTTTTGGATAATGCAGAGTGTAAGCAG
CTGATGGAGAAGTTCATGAAGGAGAAGCCGGAGCTTTGATGCTACCCCAT
CTTTCTATCTCTCTCCCAATTACCCCTCCAATCGCTCTATATTTCATATC
TCAATACAGCATACAACAAGCACATACCATCATGGAGACCGATCCCGGAT
TCATCGCTGCTGTGGAAGAAGCCAAGCAAGGCGCTGCTGAGGGTGGTGTG
CCCATTGGAGCTTGTTTGGTCTCCAAGGATGGCAAGATTCTAGGCCGCGG
CCACAATATGCGCGTCCAGAAGGGTAGTCCCGTGTTGCATGAATGAGGAC
ATTTCCGTCTGAGCTGAGATGTCCGCGCTCGAGAACTCCGGTCGTCTGCC
CGCTTCGGCCTACGAAGGCGCTACTATGTACACGACCCTGTCGCCATGCG
ACATGTGCACCGGTGCCTGCATCCTCTACAAGGTTAAGCGCGTTGTTGTG
GGCGAGAACAAGAGCTTCATGGGTGGCGAGGACTATCTTAAGAGCCGTGG
GAAGGAGGTTGTGGTTTTGGATAATGCAGAGTGTAAGCAGCTGATGGAGA
AGTTCATGAAGGAGAAGCCGGAGCTTTGATGCTACCCCATCTTTCTATCT
CTCTCCCAATTACCCCTCCAATCGCTCTATATTTCATATCTCAATACAGC
ATACAACAAGCACATACCATCATGGAGACCGATCCCGGATTCATCGCTGC
TGTGGAAGAAGCCAAGCAAGGCGCTGCTGAGGGTGGTGTGCCCATTGGAG
CTTGTTTGGTCTCCAAGGATGGCAAGATTCTAGGCCGCGGCCACAATATG
CGCGTCCAGAAGGGTAGTCCCGTGTTGCATGAATGAGGACATTTCCGTCT
GAGCTGAGATGTCCGCGCTCGAGAACTCCGGTCGTCTGCCCGCTTCGGCC
TACGAAGGCGCTACTATGTACACGACCCTGTCGCCATGCGACATGTGCAC
CGGTGCCTGCATCCTCTACAAGGTTAAGCGCGTTGTTGTGGGCGAGAACA
AGAGCTTCATGGGTGGCGAGGACTATCTTAAGAGCCGTGGGAAGGAGGTT
GTGGTTTTGGATAATGCAGAGTGTAAGCAGCTGATGGAGAAGTTCATGAA
GGAGAAGCCGGAGCTTTGATGCTACCCCATCTTTCTATCTCTCTCCCAAT
TACCCCTCCAATCGCTCTATATTTCATATCTCAATACAGCATACAACAAG
CACATACCATCATGGAGACCGATCCCGGATTCATCGCTGCTGTGGAAGAA
GCCAAGCAAGGCGCTGCTGAGGGTGGTGTGCCCATTGGAGCTTGTTTGGT
CTCCAAGGATGGCAAGATTCTAGGCCGCGGCCACAATATGCGCGTCCAGA
AGGGTAGTCCCGTGTTGCAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010168-T1.utr3p1 | KJC3_010168-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010168-T1.utr5p1 | KJC3_010168-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016193 |
| DBxref | InterPro:IPR002125 |
| DBxref | PFAM:PF14437 |
| DBxref | PFAM:PF00383 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2543057..2543883 - |
|
