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KJC3_010172-T2, KJC3_010172-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010172-T2
Unique NameKJC3_010172-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2551758..2554738-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010172-T2 ID=KJC3_010172-T2|Name=KJC3_010172-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2981bp|location=Sequence derived from alignment at ch7:2551758..2554738- (Aspergillus niger KJC3)
CTCCATCTTCTTGCTTCTCTTCCTTCCCTCTCATAACACTCCTCCTCCAC
ATCGAGGTTCGCAGTTGCTTAACTGGGACCGTTCTCGATTTCTCGATTAT
CGCATCGAGTATCTCTCTCGCTTACACTCCTTCTTCCTATTCCTTCCTAC
GAAACCTCTTCGAATCGATCGTTGTATGTTTTATTGATCCGATCTCGAAC
TACTAAAGGCGAGCAGCGCTCGTTTCGCCTCCACAACACTCAACTTCTAC
CATTCTCTCCTTCGCCCTCTGTCTTCTTACGAAACCTTACTACGAAAAAA
AATCTCGCCTCTATCAGCATGAAGGGCGGAAAAGGATCTCGCGGTCGCTC
GGGGGGTTCGGATCGTGGGGGCATCCGCAAGCGGGGTGCTACGACCCGGG
TCGACCGAGAAGGTGATCTGATGATGGATGCTGGCTCTGCACGAAACCGT
GGAAAGAAGGTTCGTGGCGATTCTGGCCGGTCGCAGGCAGCGAACAAAGC
CATGGATGCGATCCAGAAGGCCATCTCCAGCAACTCAGACACTCAAGCGA
ACATCCGACAAGGAGGACGGGGAAGTGGTCTGGAACAGGTTATTGTTCGT
GGCTGGAAACAAAGCAAGGCAGCATCTAACCGCGACGGCGGTCTCGAATC
CCTCATCGCCTTCCTCGAGAAAAAACTCAGCCCACCCGACTCGAAAGCTG
GCACACGCGCAAGGATTACAAAGGTATGTGCAACACCAGAACTGGCGGTC
ACCGACATCAATTATCAGCTTCGTCCTCTCCGATGTGCTCTCGTTTGCAG
GGGTGGTGCGTTCAGAACGACGATCGGCACTTTCTTAGTCTCTCCTGGCG
TTTGTTCTTTTGGATGAATGGCGCGGCTCGCAAGGTCCCTTATGCCTTAC
TAACGTTCATTAGTCGCGGGTTGAAGGCGACGCTCTTATCGTCTCTATTC
GGCCAGAGTTGTTGGAAAGGATGCTTCAGCTCAATGGGTTTAGTTTTGCA
GGTGCCCCTCTTACCACCGAAAAGTATGACCCGTCTACTGGTGGGTTGCT
GGACCAGCCTATGCTGTCTGCTATGGCACAAAATGGCGGCACATCCTCTG
CTGCCGAGACCAAGGCGAAAATGACGACAATTCTCGGCAAGCGCTACACC
CAGCAGACAAAATTACTCGATCTTTCGAAATTGGGAACCGATCCGGATCT
CTTGGCTATGGGAATCTTTGGCAGCACATCCACCGAGTCGAAATTCTTCC
CGGCACTGATGAAGGTTTGGGAGCTGAATTTCGACAATGCCACTGCGCGT
CGAGAGGCAGTGGAGAGTGTCAGTCTCGCTCATAATCAGCTTGCCAACAT
CACAGCTGTGACGGCACTAGCATCGACAATTCCAGACCTGAAAAATCTGG
ATCTTTCCAACAATGAATTCAAAGATGCGCAATCCTTGATTGGATGGCGC
TGGAAATTCCGCAATCTCGAGTTTCTCGATCTCTCAAACACTCCGTTCAG
CGCCGACCCTACTTTCAAGGATACCATGTTGAAGTGGTATCCCAAGCTCC
GGTTCCTGAACAATGTCGAAGTCCGTACCGCAGAAGAAATAGCGGCGCAG
AAGAAGACGCCGATTCCTGTGCAACCACCGCACTTCCAGGACGACTCTCA
GATCGCAGAGAACTTTGTTAGGGCTTTCTTCGCGGGCTACGACAACGACC
GAAGCGGCATTCTCAACAGTGTCTACGACAACCACACGACGTTCACTCTC
AATGTGAATACATCGGCTCCCAGGGCCCAACAAACAGAAACAGCGCCCTG
GGATGCGTATATCAAGAAAAGCAGAAACCTTCTCAAGATCAGCCATCTTC
CTGCACGCATGTCTAGGGTATACACCGGTGCGGAGAAAATCCGCGAGTTG
TGGACTAGTCTTCCCGCGACTAGACATCCTGACATTGCGACGCGCCCGGA
AGAATGGCTTATCGAGTGCTACCCTATCCCGGGTCTTCCTGATATTTCCG
GGCAGAGCTCCACGGGTGTTGGTGGACTTCTCATCATGGTGCACGGGAAG
TTCGACGAGATTAATGGGGCCAAGGTTGAAACTCGCAGTTTCGATAGGAC
ATTCATCATCGGGCCCGGTGGTGGTATGGGCGGAATCAGGGTCGTCAGTG
ATATTCTCTGCTTGCGAGCCTATGGTGGACACGAGGCATGGATTCCTGAG
GTTCCACCAGCCGTACCCCAAGCTGCACCTCCAGCTGCACCAGCACCAGC
ACCCGCAGCCCCTGCAGCCCCTGCGGCACTACCAGTAGCCATTCCGGGTG
CTCCCGAAGGCTACGGCATGCCAGCGCCTGGAAAAGCAGACGCACAAGTC
CAGCAAGAGCAGCTAGTACTTCAGATGAGCTCTAATACTCGAATGACCCT
CCAGTACTCTGAGATGGCTTTGTCTGGAAACGGCTGGAATATGGAGGCTG
CACTGAAGAACTTTGAGGAACTTAAGGTAAGTTCGAAGTGTATTCTCCGT
CTACGATCATGCGCTAACAAGCTTTTGCAGGCGCAGGGAACATTGCCTCC
GGAGGCTTTTCTACCCGCAGCAGTGTAGTTTGACCAAGGAGGACAGGGCC
AAATACGAAAAGAACAAAAGAAAAATAAAAATAAAAATAAGAAGATATAC
CAAATGGACGGGGAACAACTTCTCGAGCGACTCTCTCCCAGACTTGTCTG
GTCTTCGCATCCCCGACTCTCGTCGGGAGGTTCCTGGTGGTGTTTGATCG
GAGTCAACTGTCTCTTTATTTGTGATTTGCTGATGCATGGCTTGGGCGAA
TGGCTTCGGAGCTCGTTACAATTGCTTTAATTTTCTTTCGTTGTACACTA
AAAGACTACGACCATTTTCATGTCCATATAGACGAGACCTGCAGTACAAG
GGGTGGTTTAATCATAACAGAAACCTAGGGTCGATTCTAGGGGGAGGAAT
GGCCTCCAAATTGATACCACTTGACCTATCC
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Coding sequence (CDS) from alignment at ch7:2551758..2554738-

>KJC3_010172-T2 ID=KJC3_010172-T2|Name=KJC3_010172-T2|organism=Aspergillus niger KJC3|type=CDS|length=3108bp|location=Sequence derived from alignment at ch7:2551758..2554738- (Aspergillus niger KJC3)
GCGCAGGGAACATTGCCTCCGGAGGCTTTTCTACCCGCAGCAGTGTAGAT
GCTTCAGCTCAATGGGTTTAGTTTTGCAGGTGCCCCTCTTACCACCGAAA
AGTATGACCCGTCTACTGGTGGGTTGCTGGACCAGCCTATGCTGTCTGCT
ATGGCACAAAATGGCGGCACATCCTCTGCTGCCGAGACCAAGGCGAAAAT
GACGACAATTCTCGGCAAGCGCTACACCCAGCAGACAAAATTACTCGATC
TTTCGAAATTGGGAACCGATCCGGATCTCTTGGCTATGGGAATCTTTGGC
AGCACATCCACCGAGTCGAAATTCTTCCCGGCACTGATGAAGGTTTGGGA
GCTGAATTTCGACAATGCCACTGCGCGTCGAGAGGCAGTGGAGAGTGTCA
GTCTCGCTCATAATCAGCTTGCCAACATCACAGCTGTGACGGCACTAGCA
TCGACAATTCCAGACCTGAAAAATCTGGATCTTTCCAACAATGAATTCAA
AGATGCGCAATCCTTGATTGGATGGCGCTGGAAATTCCGCAATCTCGAGT
TTCTCGATCTCTCAAACACTCCGTTCAGCGCCGACCCTACTTTCAAGGAT
ACCATGTTGAAGTGGTATCCCAAGCTCCGGTTCCTGAACAATGTCGAAGT
CCGTACCGCAGAAGAAATAGCGGCGCAGAAGAAGACGCCGATTCCTGTGC
AACCACCGCACTTCCAGGACGACTCTCAGATCGCAGAGAACTTTGTTAGG
GCTTTCTTCGCGGGCTACGACAACGACCGAAGCGGCATTCTCAACAGTGT
CTACGACAACCACACGACGTTCACTCTCAATGTGAATACATCGGCTCCCA
GGGCCCAACAAACAGAAACAGCGCCCTGGGATGCGTATATCAAGAAAAGC
AGAAACCTTCTCAAGATCAGCCATCTTCCTGCACGCATGTCTAGGGTATA
CACCGGTGCGGAGAAAATCCGCGAGTTGTGGACTAGTCTTCCCGCGACTA
GACATCCTGACATTGCGACGCGCCCGGAAGAATGGCTTATCGAGTGCTAC
CCTATCCCGGGTCTTCCTGATATTTCCGGGCAGAGCTCCACGGGTGTTGG
TGGACTTCTCATCATGGTGCACGGGAAGTTCGACGAGATTAATGGGGCCA
AGGTTGAAACTCGCAGTTTCGATAGGACATTCATCATCGGGCCCGGTGGT
GGTATGGGCGGAATCAGGGTCGTCAGTGATATTCTCTGCTTGCGAGCCTA
TGGTGGACACGAGGCATGGATTCCTGAGGTTCCACCAGCCGTACCCCAAG
CTGCACCTCCAGCTGCACCAGCACCAGCACCCGCAGCCCCTGCAGCCCCT
GCGGCACTACCAGTAGCCATTCCGGGTGCTCCCGAAGGCTACGGCATGCC
AGCGCCTGGAAAAGCAGACGCACAAGTCCAGCAAGAGCAGCTAGTACTTC
AGATGAGCTCTAATACTCGAATGACCCTCCAGTACTCTGAGATGGCTTTG
TCTGGAAACGGCTGGAATATGGAGGCTGCACTGAAGAACTTTGAGGAACT
TAAGGCGCAGGGAACATTGCCTCCGGAGGCTTTTCTACCCGCAGCAGTGT
AGATGCTTCAGCTCAATGGGTTTAGTTTTGCAGGTGCCCCTCTTACCACC
GAAAAGTATGACCCGTCTACTGGTGGGTTGCTGGACCAGCCTATGCTGTC
TGCTATGGCACAAAATGGCGGCACATCCTCTGCTGCCGAGACCAAGGCGA
AAATGACGACAATTCTCGGCAAGCGCTACACCCAGCAGACAAAATTACTC
GATCTTTCGAAATTGGGAACCGATCCGGATCTCTTGGCTATGGGAATCTT
TGGCAGCACATCCACCGAGTCGAAATTCTTCCCGGCACTGATGAAGGTTT
GGGAGCTGAATTTCGACAATGCCACTGCGCGTCGAGAGGCAGTGGAGAGT
GTCAGTCTCGCTCATAATCAGCTTGCCAACATCACAGCTGTGACGGCACT
AGCATCGACAATTCCAGACCTGAAAAATCTGGATCTTTCCAACAATGAAT
TCAAAGATGCGCAATCCTTGATTGGATGGCGCTGGAAATTCCGCAATCTC
GAGTTTCTCGATCTCTCAAACACTCCGTTCAGCGCCGACCCTACTTTCAA
GGATACCATGTTGAAGTGGTATCCCAAGCTCCGGTTCCTGAACAATGTCG
AAGTCCGTACCGCAGAAGAAATAGCGGCGCAGAAGAAGACGCCGATTCCT
GTGCAACCACCGCACTTCCAGGACGACTCTCAGATCGCAGAGAACTTTGT
TAGGGCTTTCTTCGCGGGCTACGACAACGACCGAAGCGGCATTCTCAACA
GTGTCTACGACAACCACACGACGTTCACTCTCAATGTGAATACATCGGCT
CCCAGGGCCCAACAAACAGAAACAGCGCCCTGGGATGCGTATATCAAGAA
AAGCAGAAACCTTCTCAAGATCAGCCATCTTCCTGCACGCATGTCTAGGG
TATACACCGGTGCGGAGAAAATCCGCGAGTTGTGGACTAGTCTTCCCGCG
ACTAGACATCCTGACATTGCGACGCGCCCGGAAGAATGGCTTATCGAGTG
CTACCCTATCCCGGGTCTTCCTGATATTTCCGGGCAGAGCTCCACGGGTG
TTGGTGGACTTCTCATCATGGTGCACGGGAAGTTCGACGAGATTAATGGG
GCCAAGGTTGAAACTCGCAGTTTCGATAGGACATTCATCATCGGGCCCGG
TGGTGGTATGGGCGGAATCAGGGTCGTCAGTGATATTCTCTGCTTGCGAG
CCTATGGTGGACACGAGGCATGGATTCCTGAGGTTCCACCAGCCGTACCC
CAAGCTGCACCTCCAGCTGCACCAGCACCAGCACCCGCAGCCCCTGCAGC
CCCTGCGGCACTACCAGTAGCCATTCCGGGTGCTCCCGAAGGCTACGGCA
TGCCAGCGCCTGGAAAAGCAGACGCACAAGTCCAGCAAGAGCAGCTAGTA
CTTCAGATGAGCTCTAATACTCGAATGACCCTCCAGTACTCTGAGATGGC
TTTGTCTGGAAACGGCTGGAATATGGAGGCTGCACTGAAGAACTTTGAGG
AACTTAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0051028mRNA transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010172KJC3_010172Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010172-T2KJC3_010172-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010172-T2.cdsKJC3_010172-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010172-T2.utr3p1KJC3_010172-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010172-T2.exon2KJC3_010172-T2.exon2Aspergillus niger KJC3exon
KJC3_010172-T2.exon1KJC3_010172-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010172-T2.utr5p1KJC3_010172-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263MNN
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR032710
DBxrefInterPro:IPR018222
DBxrefInterPro:IPR002075
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR005637
DBxrefPFAM:PF03943
DBxrefPFAM:PF02136
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2551758..2554738 -
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