You are here

Home

KJC3_010202-T1, KJC3_010202-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010202-T1
Unique NameKJC3_010202-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2661194..2662960+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010202-T1 ID=KJC3_010202-T1|Name=KJC3_010202-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1767bp|location=Sequence derived from alignment at ch7:2661194..2662960+ (Aspergillus niger KJC3)
GCTGCTTGCCGGGCTTCTGGTTTTGTCTGTCACTGACCAGGCACTCGACA
ACGCTTTGTCTGTGATCGCTTCAAACTGTGAACACTGCGGTCGCCAGAGT
CCCCTCACACAGTCTAGACAGCCTGTCACCCTCCGATCATTCCACACACA
CTGAGCTGCTAGACTCTCCTGGGAGTCCCCGCTCCGAAATATCGCCAATT
ATTATTCCGCACCGCCATATTATTCTCAGGTAATAAGTCCGATACTGGAA
TTTCGGTCAAAGTGTATCATAAACGGTTTGGGACGCTGGTCGATATTCTT
CTCGCAATTATCATTACGCCAAATACCTCATCCATTCAATCCACCAAATA
TACCATCTCGTTACAATAATGGCAGGCCAGTCGAAGCCCGCACTTTCCCC
TTGGGGAAGTGCCGTTGCAGGTGCTACAGGTGCGGTTCTAGCGAACGCTT
TGGTCTACCCTCTCGATCTGTATGCAAGTGCCTGTTGTCGCTTTAGAACT
GGAAACAAAGAATATGCTAATAACCATGCGTCAATCCACAGAGTCAAGAC
GAAGCTTCAAGTACAAGTTAAGACAAACGACGCGAAAGACGAGAACTCCG
AAACAGTTCACTATAAATCGACATTAGATGCGATCACCAAGATTGTCGAA
AAGGAAGGAGTCGAAGGCCTATACTCCGGAATCGTTGGCTCACTCATCGG
TGTGGCGTCCACCAACTTCGCCTACTTCTACTGGTACACCGTTGTGAGGG
CCTTCTATATGGCATCTAACAAGGTCCCTAAACCTCCTGGAACTGCCATT
GAGCTTTCCCTCGGTGCCGTGGCGGGCGCGGTCGCCCAGATCTTCACTAT
TCCCGTCGCCGTAATCACCACACGGCAGCAGACACAAGCCAAAAACGAGA
GGAAGGGTTTGATTGAAACTGGAAAGGAGATTGTCGATAGTGAAGATGGT
TGGACCGGTCTATGGAGAGGACTCAAAGCTAGTTTGATCCTGGTGGTCAA
CCCTGCAATCACATACGGCGCCTATCAGCGCCTCAAAGATATCATCTTCC
CAGGCAAGAACAGTCTGAAGCCTTGGGAGGCTTTCCGTAAGTAACCCTAT
TACCGTCCATATCTTACGAGCCAAACCAATGACTTTTGCAGTCCTCGGCG
CTCTCTCCAAGGCGCTAGCTACTATCGCGACGCAGCCATTGATCGTGGCT
AAGGTCGGCCTCCAGTCCCGCCCACCTCCGAGCCGCGAAGGAAAGCCTTT
CAAGACATTCGGCGAAGTTATGCGCTATATTGTGCAGAACGAGGGTCTCC
TGTCCCTATTCAAGGGAATTGGACCCCAGATCATGAAGGGACTCCTTGTG
CAAGGCCTTTTGATGATGACTAAGGAGAGGTATGTTTGGTCTTGATTAAG
GGGCGCAATCACATGCTGACAGCGACCAGGGTTGAACTCATCTTCGTTCT
TCTTTTCGCATACCTGCGCAAGATTAGAGAGCAGAAGCTCAAGAAGCTGG
CGGACTCTGCTGCATCGACAGCGAAGACCAGTCTTCCGGCGACCCTCAAA
TAGACGTTTGATTGATTCTGATTTATGGCTCGGTAACTACCATTTTTATT
GTACGAATTTGTTTTTATTCTCACTGCGGCGCACTGGTTGTGGGATTTCG
CCTGTCCTGTCAGTTTCTGGTATGACCGAAGATACTACTGCAGTTGTCTA
TAGATAATAACAGCATGATATCTAGAACATACAATAGCATCAAAAGGATC
ATCGCACTGCGGCAAGG
back to top

Coding sequence (CDS) from alignment at ch7:2661194..2662960+

>KJC3_010202-T1 ID=KJC3_010202-T1|Name=KJC3_010202-T1|organism=Aspergillus niger KJC3|type=CDS|length=4032bp|location=Sequence derived from alignment at ch7:2661194..2662960+ (Aspergillus niger KJC3)
ATGGCAGGCCAGTCGAAGCCCGCACTTTCCCCTTGGGGAAGTGCCGTTGC
AGGTGCTACAGGTGCGGTTCTAGCGAACGCTTTGGTCTACCCTCTCGATC
TAGTCAAGACGAAGCTTCAAGTACAAGTTAAGACAAACGACGCGAAAGAC
GAGAACTCCGAAACAGTTCACTATAAATCGACATTAGATGCGATCACCAA
GATTGTCGAAAAGGAAGGAGTCGAAGGCCTATACTCCGGAATCGTTGGCT
CACTCATCGGTGTGGCGTCCACCAACTTCGCCTACTTCTACTGGTACACC
GTTGTGAGGGCCTTCTATATGGCATCTAACAAGGTCCCTAAACCTCCTGG
AACTGCCATTGAGCTTTCCCTCGGTGCCGTGGCGGGCGCGGTCGCCCAGA
TCTTCACTATTCCCGTCGCCGTAATCACCACACGGCAGCAGACACAAGCC
AAAAACGAGAGGAAGGGTTTGATTGAAACTGGAAAGGAGATTGTCGATAG
TGAAGATGGTTGGACCGGTCTATGGAGAGGACTCAAAGCTAGTTTGATCC
TGGTGGTCAACCCTGCAATCACATACGGCGCCTATCAGCGCCTCAAAGAT
ATCATCTTCCCAGGCAAGAACAGTCTGAAGCCTTGGGAGGCTTTCCTCCT
CGGCGCTCTCTCCAAGGCGCTAGCTACTATCGCGACGCAGCCATTGATCG
TGGCTAAGGTCGGCCTCCAGTCCCGCCCACCTCCGAGCCGCGAAGGAAAG
CCTTTCAAGACATTCGGCGAAGTTATGCGCTATATTGTGCAGAACGAGGG
TCTCCTGTCCCTATTCAAGGGAATTGGACCCCAGATCATGAAGGGACTCC
TTGTGCAAGGCCTTTTGATGATGACTAAGGAGAGGGTTGAACTCATCTTC
GTTCTTCTTTTCGCATACCTGCGCAAGATTAGAGAGCAGAAGCTCAAGAA
GCTGGCGGACTCTGCTGCATCGACAGCGAAGACCAGTCTTCCGGCGACCC
TCAAATAGATGGCAGGCCAGTCGAAGCCCGCACTTTCCCCTTGGGGAAGT
GCCGTTGCAGGTGCTACAGGTGCGGTTCTAGCGAACGCTTTGGTCTACCC
TCTCGATCTAGTCAAGACGAAGCTTCAAGTACAAGTTAAGACAAACGACG
CGAAAGACGAGAACTCCGAAACAGTTCACTATAAATCGACATTAGATGCG
ATCACCAAGATTGTCGAAAAGGAAGGAGTCGAAGGCCTATACTCCGGAAT
CGTTGGCTCACTCATCGGTGTGGCGTCCACCAACTTCGCCTACTTCTACT
GGTACACCGTTGTGAGGGCCTTCTATATGGCATCTAACAAGGTCCCTAAA
CCTCCTGGAACTGCCATTGAGCTTTCCCTCGGTGCCGTGGCGGGCGCGGT
CGCCCAGATCTTCACTATTCCCGTCGCCGTAATCACCACACGGCAGCAGA
CACAAGCCAAAAACGAGAGGAAGGGTTTGATTGAAACTGGAAAGGAGATT
GTCGATAGTGAAGATGGTTGGACCGGTCTATGGAGAGGACTCAAAGCTAG
TTTGATCCTGGTGGTCAACCCTGCAATCACATACGGCGCCTATCAGCGCC
TCAAAGATATCATCTTCCCAGGCAAGAACAGTCTGAAGCCTTGGGAGGCT
TTCCTCCTCGGCGCTCTCTCCAAGGCGCTAGCTACTATCGCGACGCAGCC
ATTGATCGTGGCTAAGGTCGGCCTCCAGTCCCGCCCACCTCCGAGCCGCG
AAGGAAAGCCTTTCAAGACATTCGGCGAAGTTATGCGCTATATTGTGCAG
AACGAGGGTCTCCTGTCCCTATTCAAGGGAATTGGACCCCAGATCATGAA
GGGACTCCTTGTGCAAGGCCTTTTGATGATGACTAAGGAGAGGGTTGAAC
TCATCTTCGTTCTTCTTTTCGCATACCTGCGCAAGATTAGAGAGCAGAAG
CTCAAGAAGCTGGCGGACTCTGCTGCATCGACAGCGAAGACCAGTCTTCC
GGCGACCCTCAAATAGATGGCAGGCCAGTCGAAGCCCGCACTTTCCCCTT
GGGGAAGTGCCGTTGCAGGTGCTACAGGTGCGGTTCTAGCGAACGCTTTG
GTCTACCCTCTCGATCTAGTCAAGACGAAGCTTCAAGTACAAGTTAAGAC
AAACGACGCGAAAGACGAGAACTCCGAAACAGTTCACTATAAATCGACAT
TAGATGCGATCACCAAGATTGTCGAAAAGGAAGGAGTCGAAGGCCTATAC
TCCGGAATCGTTGGCTCACTCATCGGTGTGGCGTCCACCAACTTCGCCTA
CTTCTACTGGTACACCGTTGTGAGGGCCTTCTATATGGCATCTAACAAGG
TCCCTAAACCTCCTGGAACTGCCATTGAGCTTTCCCTCGGTGCCGTGGCG
GGCGCGGTCGCCCAGATCTTCACTATTCCCGTCGCCGTAATCACCACACG
GCAGCAGACACAAGCCAAAAACGAGAGGAAGGGTTTGATTGAAACTGGAA
AGGAGATTGTCGATAGTGAAGATGGTTGGACCGGTCTATGGAGAGGACTC
AAAGCTAGTTTGATCCTGGTGGTCAACCCTGCAATCACATACGGCGCCTA
TCAGCGCCTCAAAGATATCATCTTCCCAGGCAAGAACAGTCTGAAGCCTT
GGGAGGCTTTCCTCCTCGGCGCTCTCTCCAAGGCGCTAGCTACTATCGCG
ACGCAGCCATTGATCGTGGCTAAGGTCGGCCTCCAGTCCCGCCCACCTCC
GAGCCGCGAAGGAAAGCCTTTCAAGACATTCGGCGAAGTTATGCGCTATA
TTGTGCAGAACGAGGGTCTCCTGTCCCTATTCAAGGGAATTGGACCCCAG
ATCATGAAGGGACTCCTTGTGCAAGGCCTTTTGATGATGACTAAGGAGAG
GGTTGAACTCATCTTCGTTCTTCTTTTCGCATACCTGCGCAAGATTAGAG
AGCAGAAGCTCAAGAAGCTGGCGGACTCTGCTGCATCGACAGCGAAGACC
AGTCTTCCGGCGACCCTCAAATAGATGGCAGGCCAGTCGAAGCCCGCACT
TTCCCCTTGGGGAAGTGCCGTTGCAGGTGCTACAGGTGCGGTTCTAGCGA
ACGCTTTGGTCTACCCTCTCGATCTAGTCAAGACGAAGCTTCAAGTACAA
GTTAAGACAAACGACGCGAAAGACGAGAACTCCGAAACAGTTCACTATAA
ATCGACATTAGATGCGATCACCAAGATTGTCGAAAAGGAAGGAGTCGAAG
GCCTATACTCCGGAATCGTTGGCTCACTCATCGGTGTGGCGTCCACCAAC
TTCGCCTACTTCTACTGGTACACCGTTGTGAGGGCCTTCTATATGGCATC
TAACAAGGTCCCTAAACCTCCTGGAACTGCCATTGAGCTTTCCCTCGGTG
CCGTGGCGGGCGCGGTCGCCCAGATCTTCACTATTCCCGTCGCCGTAATC
ACCACACGGCAGCAGACACAAGCCAAAAACGAGAGGAAGGGTTTGATTGA
AACTGGAAAGGAGATTGTCGATAGTGAAGATGGTTGGACCGGTCTATGGA
GAGGACTCAAAGCTAGTTTGATCCTGGTGGTCAACCCTGCAATCACATAC
GGCGCCTATCAGCGCCTCAAAGATATCATCTTCCCAGGCAAGAACAGTCT
GAAGCCTTGGGAGGCTTTCCTCCTCGGCGCTCTCTCCAAGGCGCTAGCTA
CTATCGCGACGCAGCCATTGATCGTGGCTAAGGTCGGCCTCCAGTCCCGC
CCACCTCCGAGCCGCGAAGGAAAGCCTTTCAAGACATTCGGCGAAGTTAT
GCGCTATATTGTGCAGAACGAGGGTCTCCTGTCCCTATTCAAGGGAATTG
GACCCCAGATCATGAAGGGACTCCTTGTGCAAGGCCTTTTGATGATGACT
AAGGAGAGGGTTGAACTCATCTTCGTTCTTCTTTTCGCATACCTGCGCAA
GATTAGAGAGCAGAAGCTCAAGAAGCTGGCGGACTCTGCTGCATCGACAG
CGAAGACCAGTCTTCCGGCGACCCTCAAATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005347ATP transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010202KJC3_010202Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010202-T1KJC3_010202-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010202-T1.utr5p1KJC3_010202-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010202-T1.exon1KJC3_010202-T1.exon1Aspergillus niger KJC3exon
KJC3_010202-T1.exon2KJC3_010202-T1.exon2Aspergillus niger KJC3exon
KJC3_010202-T1.exon3KJC3_010202-T1.exon3Aspergillus niger KJC3exon
KJC3_010202-T1.exon4KJC3_010202-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010202-T1.cdsKJC3_010202-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010202-T1.utr3p1KJC3_010202-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR002067
DBxrefPFAM:PF00153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2661194..2662960 +
Powered by Drupal