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KJC3_010207-T1, KJC3_010207-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010207-T1
Unique NameKJC3_010207-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2671994..2672738+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010207-T1 ID=KJC3_010207-T1|Name=KJC3_010207-T1|organism=Aspergillus niger KJC3|type=mRNA|length=745bp|location=Sequence derived from alignment at ch7:2671994..2672738+ (Aspergillus niger KJC3)
ATGCGTAAGTATCATCTCCTTGGTGAAATCGAATAGGCGAACTAATATGT
ATCCCATTGGGCAGCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATGT
AAGTTGCATATTCTGAAGATCACTCGGCGCGATTTTTGACGCAGCTGCTA
ACGATCTTTTATAGCCACCTGAGAGTGACTGGTGGTGAGGTCGGTGCCCA
GTCTGCTCTGGCCCCCAAGATTGGTCCTCTCGGTCTGTCCCCCAAGAAGA
TCGGTGAAGATATTGCCAAGAACACTGGTGACTGGGTAAGCACATCGTCC
GGGTCAACCATAGGAGGTTACAGTGCTAACAGCATCTTTTTGGTATTATA
GAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTCAGGCCG
CGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCCCTCAAG
GAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAGCAAGTC
CATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCCACCGCT
CTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGTACCGCT
TTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGTCTCCGA
CGACGTCAAGGCTGGCGAGATCGACAGTATGTTAACCACCATACGATATC
TTTCGAGACTTTGCCACTAACTATTTCGCAGTCCCCTCCGAGTAA
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Coding sequence (CDS) from alignment at ch7:2671994..2672738+

>KJC3_010207-T1 ID=KJC3_010207-T1|Name=KJC3_010207-T1|organism=Aspergillus niger KJC3|type=CDS|length=2490bp|location=Sequence derived from alignment at ch7:2671994..2672738+ (Aspergillus niger KJC3)
ATGCCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATCCACCTGAGAGT
GACTGGTGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTC
CTCTCGGTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACT
GGTGACTGGAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCG
TCAGGCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGG
CCCTCAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCAC
AGCAAGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCG
CCACCGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCG
GTACCGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGAC
GTCTCCGACGACGTCAAGGCTGGCGAGATCGACATCCCCTCCGAGTAAAT
GCCTCCCAAGTTCGACCCCAATGAGGTGAAGATCATCCACCTGAGAGTGA
CTGGTGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCT
CTCGGTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGG
TGACTGGAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTC
AGGCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCC
CTCAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAG
CAAGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCC
ACCGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGT
ACCGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGT
CTCCGACGACGTCAAGGCTGGCGAGATCGACATCCCCTCCGAGTAAATGC
CTCCCAAGTTCGACCCCAATGAGGTGAAGATCATCCACCTGAGAGTGACT
GGTGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCTCT
CGGTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGGTG
ACTGGAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTCAG
GCCGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCCCT
CAAGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAGCA
AGTCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCCAC
CGCTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGTAC
CGCTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGTCT
CCGACGACGTCAAGGCTGGCGAGATCGACATCCCCTCCGAGTAAATGCCT
CCCAAGTTCGACCCCAATGAGGTGAAGATCATCCACCTGAGAGTGACTGG
TGGTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCTCTCG
GTCTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGGTGAC
TGGAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTCAGGC
CGCGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCCCTCA
AGGAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAGCAAG
TCCATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCCACCG
CTCTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGTACCG
CTTTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGTCTCC
GACGACGTCAAGGCTGGCGAGATCGACATCCCCTCCGAGTAAATGCCTCC
CAAGTTCGACCCCAATGAGGTGAAGATCATCCACCTGAGAGTGACTGGTG
GTGAGGTCGGTGCCCAGTCTGCTCTGGCCCCCAAGATTGGTCCTCTCGGT
CTGTCCCCCAAGAAGATCGGTGAAGATATTGCCAAGAACACTGGTGACTG
GAAGGGTCTCCGTGTCACCGTCCGCCTGACCATCCAGAACCGTCAGGCCG
CGGTCTCCGTTGTGCCCTCCGCCTCTTCCCTGGTCATCAAGGCCCTCAAG
GAGCCTCCCCGTGACCGCAAGAAGGAGAAGAACATCAAGCACAGCAAGTC
CATCCCTCTGGACGAGATCATCGAGATCGCCCGCAAGATGCGCCACCGCT
CTCTTGCTAAGGAGCTCAAGGGTACCGTCCTTGAGATCCTCGGTACCGCT
TTCTCCGTCGGTTGCCAGGTCGATGGCCGCAGCCCCAAGGACGTCTCCGA
CGACGTCAAGGCTGGCGAGATCGACATCCCCTCCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL12KJC3_010207Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010207-T1KJC3_010207-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010207-T1.exon1KJC3_010207-T1.exon1Aspergillus niger KJC3exon
KJC3_010207-T1.exon2KJC3_010207-T1.exon2Aspergillus niger KJC3exon
KJC3_010207-T1.exon3KJC3_010207-T1.exon3Aspergillus niger KJC3exon
KJC3_010207-T1.exon4KJC3_010207-T1.exon4Aspergillus niger KJC3exon
KJC3_010207-T1.exon5KJC3_010207-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010207-T1.cdsKJC3_010207-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
NoteBUSCO:EOG092651LN
DBxrefInterPro:IPR036796
DBxrefInterPro:IPR020783
DBxrefInterPro:IPR036769
DBxrefInterPro:IPR020784
DBxrefInterPro:IPR000911
DBxrefPFAM:PF03946
DBxrefPFAM:PF00298
Product60S ribosomal protein L12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2671994..2672738 +
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