|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2745222..2746626- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010222-T2 ID=KJC3_010222-T2|Name=KJC3_010222-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1405bp|location=Sequence derived from alignment at ch7:2745222..2746626- (Aspergillus niger KJC3)
CTCCGCTTTTGCTACGTCTTATAGAAGTTGGTGGTGGTGCATAGTCTCGC
TGTATACTGCTGAATCTCATATTGTCTTGGATATGGCTGGAGCGGTGCGC
CAACCTATTGATGTTCCGTCCCTGGAACGCTATCTCAATCTCAATGTACC
CGATATCAAGACCCCCTTGGATGTGAAGCAGGTATACATTGACCCTTCCG
AATTACTGTCCTGGCCACACAACTCACAGTCTCTAGTTTGGCTTTGGTCA
ATCCAATCCTACGTATCAACTCACCACCGCCGACGGTAGCAAATATGTCC
TCCGCAAGAAACCCCCGGGCAAGCTACTCTCCAAGACTGCGCACAAAGTC
GAGCGCGAGTACAAGATCATCCATGCCCTAGGAAACACCGACGTGCCCGT
CCCCAAAGCCTACTGTCTCTGCGAGGATAGTAGCGTAATCGGAACCCCCT
TCTACATCATGGAATTCCTAGATGGACGACACTTTACTGATCCTGCCATG
CCCGGGGTCGACCCGGCAGAGAGAACAGCATTGTACGTCATCCCTTGCCC
CCCTCCCCCTGCCTCTTCGGGATGATACAACCCGCCTGGCGCGGCTACTG
TTACATGAAAGCGGGAAAAATTGGAGCTAACCACACACACGCCCCCCCTA
CCAACAGATGGCAGGATGCGGTCCGGACATTAGCCAAGTTCCACCGGGTA
GTCCCCCAAAAGGTCGGGTTGGATAGGTTCGGAAAACCGACGGGGTACTA
TGATCGACAGATCGCCACCTTCACAGCAGTTGCACAGGCGCAGGCACAAG
CCGTGGATGTGGAGACCAAGGAACCTGTCGGAGAGTTGCCTCATTTCATG
GACATGGTGCGTTTCTTTGACGACAAGACGACGCAGCCGCAAGACCGCGG
CACGCTCGTGCACGGTGACTATAAGATCGATAATATGATATTCCACAAAT
CCGAGCCGCGAGTCATCGGCCTCTTGGATTGGGAAATGGCCACAGTGGGG
CACCCTCTGTCCGACTTCTGCAACCTCACTAGTCCCTTTTTCCTGGACGG
GGTGGACCACAAGAAGGAAATGTTCGTCCCGAAGGTAGTGCCTGGCTTGC
CCGCTCGAGAGGACTGTATCCGTTGGTATCGTGAGGTGTCGGGGTATGAC
CCCACTGGGGATATCCCATGGGGTGATGCTTTCTTCTCCTGGAGAAGCTC
GGTGATTATGCATGGTATCAAGGCCCGGTATGCCCTGAGGCAGGCCAGTA
GTGCCCGCGCTGCGGAATATGCTAGAAATACGGAGCCTTTTGCGCTCGAG
GCTTGGGAACGTGTTAAGAGAGTGCGAGCCCAGCTGGGTCAAAAGGCCAG
GCTGTAACTAGTTTTCTTTTTTCGTCAAGCCGAACAGACATAAATTAATT
CTCCC back to topCoding sequence (CDS) from alignment at ch7:2745222..2746626- >KJC3_010222-T2 ID=KJC3_010222-T2|Name=KJC3_010222-T2|organism=Aspergillus niger KJC3|type=CDS|length=786bp|location=Sequence derived from alignment at ch7:2745222..2746626- (Aspergillus niger KJC3)
ATGATACAACCCGCCTGGCGCGGCTACTGTTACATGAAAGCGGGAAAAAT
TGGAGCTAACCACACACACGCCCCCCCTACCAACAGATGGCAGGATGCGG
TCCGGACATTAGCCAAGTTCCACCGGGTAGTCCCCCAAAAGGTCGGGTTG
GATAGGTTCGGAAAACCGACGGGGTACTATGATCGACAGATCGCCACCTT
CACAGCAGTTGCACAGGCGCAGGCACAAGCCGTGGATGTGGAGACCAAGG
AACCTGTCGGAGAGTTGCCTCATTTCATGGACATGGTGCGTTTCTTTGAC
GACAAGACGACGCAGCCGCAAGACCGCGGCACGCTCGTGCACGGTGACTA
TAAGATCGATAATATGATATTCCACAAATCCGAGCCGCGAGTCATCGGCC
TCTTGGATTGGGAAATGGCCACAGTGGGGCACCCTCTGTCCGACTTCTGC
AACCTCACTAGTCCCTTTTTCCTGGACGGGGTGGACCACAAGAAGGAAAT
GTTCGTCCCGAAGGTAGTGCCTGGCTTGCCCGCTCGAGAGGACTGTATCC
GTTGGTATCGTGAGGTGTCGGGGTATGACCCCACTGGGGATATCCCATGG
GGTGATGCTTTCTTCTCCTGGAGAAGCTCGGTGATTATGCATGGTATCAA
GGCCCGGTATGCCCTGAGGCAGGCCAGTAGTGCCCGCGCTGCGGAATATG
CTAGAAATACGGAGCCTTTTGCGCTCGAGGCTTGGGAACGTGTTAAGAGA
GTGCGAGCCCAGCTGGGTCAAAAGGCCAGGCTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010222-T2.utr3p1 | KJC3_010222-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR041726 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2745222..2746626 - |
|
