|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2800245..2803918+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010239-T1 ID=KJC3_010239-T1|Name=KJC3_010239-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3674bp|location=Sequence derived from alignment at ch7:2800245..2803918+ (Aspergillus niger KJC3) CTTCGACGGTGGTCGGGGTTTTATCCTACGAAGCACCTCGGGTTCGCTAT
GTTCACCCTTGATGGTGACTCCTCTGACTATTTCGACGATGATCTGGGCG
ACTTGGGCGTCGACCGGCCTTCGGATGCGACTGACCCTGACACTCCCCCA
CCAGCCAAGCGCCGTCGTCTAAGAGCCGGTAAAGATGCATCAAACGCAGA
CCTGCAATCGCATCAGAAGCCACGTGCAGAGCGTGGTGATGGTGCTAGAA
CAGCGCTAAGCTCGGACTCGTTTATCGACTATGATGATGACGAAGTGCCA
TCTCCCGAACGAGAGTCACCCTACTTCCAAGACGATAGTGAACGGGAGGC
ACGGTCCAAATACAAAGTCTTCGCTCCCAAGAACGCAAACATCCAGGAGA
ACATCTTTGTGACACAGCTAACACAACCTCCCTCTCCGCCGGAAATGCTT
CGTGGTCCCCGGTGGAAGAAGCCTGATCCTGGCTTGCCAACCCGAACTGT
TGCCACCCCGCTACCAGAGACAACTCAAAGCAGAGAATCTGCTGCTGGTG
ATAGAGATGATGAGTATGATGATGATGAAGAGATGAAAGCGGCGATTGAG
GCATCGTTGCAATCATTCGAGGAAGAAACGTCAAGACCAGCTCCCTCCGT
GCCTTTACAAAAGCCCCCATCATCTACTCCCATTATTGGACAACAGAGCA
CTACCATCGAGGCCTCCAATGACCTTTTGGATGATATACCTGATGATGCC
TTTGACTCAGACCTGTCAATGTCGCCGCCTCCTGCGCCCCAGCCTCGCCC
GGCGGCTCGGTCATTCACACAGTCAACGAATCGCCCACTAGGTGTCCGCC
AAACCACACTATTTGGTATGGTTGCTAGAAACCCAGAAAATCAGCCACCA
CGCGGTGAACAGGTGTACTCCCCGCCTGAGAAAAGCGAGCCACCTACTCA
GCATAAACTTAACCAGGAAGCCTTGGGTACGTGGGTTTACCCTACAAATC
TGGGTAAAACTCGAGACTATCAGTTCAATATTGCACAGAAAGGCCTCTTT
CACAATTTGCTTGTAGCCCTACCCACGGGCCTTGGAAAAACGTTCATTGC
AGCTACTATCATGCTCAACTGGTTTCGATGGACGAAGGACGCTCAGATCG
TCTTTGTTGCGCCTACAAAACCGCTAGTTGCCCAGCAGATTTCTGCATGC
TTTGAGGTCGCTGGAATCCCAAGATCCCAGACCACTATGCTCACGGGGGA
GGCTGCTCCGGGAATCCGAGCCGAAGAATGGAAGGCGAAACGGGTGTTCT
TCATGACACCTCAAACCTTGATCAACGACCTCAAAACCGGGATTGCAGAT
CCGAAGCGGATTGTCCTAGTCGTTGTCGACGAAGCTCATCGTGCAACCGG
TGGTTATGCATATGTCGAGGTTGTCAAGTTCCTGCGGCGGTACAATCAGA
GCTTCCGCGTCCTGGCTTTGACAGCTACGCCAGGCTCAACGGTGGAATCT
GTTCAGGCTGTCATTGACGGCCTCGATATATCGAGAGTCGAGATACGGAC
AGAGCAGTCACTCGATATCAGAGAGTATGTACATTCGAAAGACACGGATG
TGCAGACATTCCAGAATTCAGAGGAGATGGTCCTTTGCATGGACCTGATG
TCGAAAGCTCTACAGCCACTTCTTGATCAATTACGGAGTACAAATGCCTA
TTGGGGCCGTGACCCCATGGGTCTCACAGCATACGGACTCACCAAAGCCA
GACAGCAATGGATGCTGTCCGACTCCGGCAGGAACGCCCATTTCGGCGTG
AAGGCCAAAATGAATGCAATTTTCACGGTTCTAGCCAGCTTGGCTCATGG
CATCGATCTTCTCAAATACCATGGGATTACACCCTTTTACCGTCATCTTC
TGCATTTCCAATCCAACACCGAGGGACAAAAGGGCGGCAAGTATCAGCGG
CAAGTCGTTCAGGATGAGAGCTACAAAAAGCTCATGAACCATTTGCAGCC
GTGGACAAAGAATCCAGAGTTCATTGGACACCCCAAGTTGGAGTATCTGA
AGCAGGTAGTGTTGAATCATTTCATGGATGCTGGTGAAGGCTCTGGGGCA
GACGAAAACAAGGACCAACCAGCCACTCGCGTGATGATATTCGTACACTT
CCGTGATAGCGCAGAAGAGGTCACGAGAGTACTCAAGAGATACGAGCCCA
TGATTCGGCCCCATGTCTTCGTGGGGCAGAGTAGCGCCAAAGGCTCGGAA
GGAATGGGACAGAAAACACAACTCGACATTGTGCAGAAGTTCAAAAAGGG
TACCTACAACACCATCGTTGCAACTTCAATCGGCGAGGAAGGTTTGGATA
TCGGTGAGGTAGACCTCATCGTGTGTTACGACTCTTCAGCTTCGCCTATT
CGTATGCTTCAGCGCATGGGACGTACCGGTCGAAAGAGATCAGGAAAAAT
CACGCTCCTACTCATGCAAGGCAAAGAAGAAGAGTCCTACATCAAGGCCA
AGGACAATTACGAAAAGATGCAGCAGATGATAGCCAGTGGCACCCGATTC
ACCTTCCACGATGACATGTCTCCGCGGATCTTGCCCCCGGGTGTGCGGCC
TGTTGCTGATAAACGAGCGATTGATATTCCCGAGGAGAACACTGTGCGAG
ATCTACCAGAGCCGAAACGACGCGGCCGGGCACCGAAGAGGCCGCCGAAG
AAATTCCATATGCCTGATAATGTCGAAACCGGGTTCACTACGGCATCGCA
TTTGGCCGGGACCTCGAAGCGCAAAGTACCAAATAAAAGTAAGGCTCGAA
CGCCGACTCCAGAGCCCGTGGAATTACCGGCGCTTGAAGATGTCCTGCTT
ACCCCGGCGCAGCAAAAAGAACTTGAACTCCATTACAGCAACGCCGGGCC
CAGTGAAGAGCTTTTGGTCAGTTATCCCAGAAGCGACGCCTTCCCACGCC
TTCAGCTTGCGCCTAGACCTACGAAAGCGGTTAGGCACGGGTCATTAACT
CGTCGCATGATTGAAACGTTGCAGAAGATGGACCAGATCACTCCAGACTG
TGGAGATCGATACAAGGGGATCTTAGCGCGTGAGAAAGCCTCCATGCCAA
AAGCCTCGATAGTAGCGCCTAAGCCCAACGGCCGTGGGGAGGCTCAGTCG
AGGACCAAAGCAAGGCACACATCCAAGGTGGTGTCATCCAAGCCAAGGAA
TCAGGAAGAGCAGGATGTGACTGAAGTACAACGAACCCCACCAGGCAAGC
ACTCAGTATCAGCGACTAACGCTGAAGTGGAACCGTTCTACTGCTCGCAG
AGGACCCAAGATGGAGATACAGACGATGATTTTGACCTTCCTGATGTCTC
TACTCTGTTGAATAGGAGTGTGGAGAGGCCCTCGAAACGGGGCCGGTTTG
TTCTGGATGATAGTGATGACTGATTTGGACATGAACGCATAGCTTGGTTA
ACATTCTGCATTGGTAGTACTTTCGGTTGCATATACCCTTGGGCAATATA
CTTTGAAGATTACGGTGGAGTTATTCTTTGATGCCATGCTAAATTTCTCC
TTAGAACACCGTTACTGAACTTGGTAGTTAAGACTAGGCGGACAGTAACT
GAGACCAGACGCAGGAATTCAGTTCAACCCGTTAGTTTACAATTGTATAA
CTCATAGAGTACTCAATGAAATCA back to topCoding sequence (CDS) from alignment at ch7:2800245..2803918+ >KJC3_010239-T1 ID=KJC3_010239-T1|Name=KJC3_010239-T1|organism=Aspergillus niger KJC3|type=CDS|length=5508bp|location=Sequence derived from alignment at ch7:2800245..2803918+ (Aspergillus niger KJC3) ATGTTCACCCTTGATGGTGACTCCTCTGACTATTTCGACGATGATCTGGG CGACTTGGGCGTCGACCGGCCTTCGGATGCGACTGACCCTGACACTCCCC CACCAGCCAAGCGCCGTCGTCTAAGAGCCGGTAAAGATGCATCAAACGCA GACCTGCAATCGCATCAGAAGCCACGTGCAGAGCGTGGTGATGGTGCTAG AACAGCGCTAAGCTCGGACTCGTTTATCGACTATGATGATGACGAAGTGC CATCTCCCGAACGAGAGTCACCCTACTTCCAAGACGATAGTGAACGGGAG GCACGGTCCAAATACAAAGTCTTCGCTCCCAAGAACGCAAACATCCAGGA GAACATCTTTGTGACACAGCTAACACAACCTCCCTCTCCGCCGGAAATGC TTCGTGGTCCCCGGTGGAAGAAGCCTGATCCTGGCTTGCCAACCCGAACT GTTGCCACCCCGCTACCAGAGACAACTCAAAGCAGAGAATCTGCTGCTGG TGATAGAGATGATGAGTATGATGATGATGAAGAGATGAAAGCGGCGATTG AGGCATCGTTGCAATCATTCGAGGAAGAAACGTCAAGACCAGCTCCCTCC GTGCCTTTACAAAAGCCCCCATCATCTACTCCCATTATTGGACAACAGAG CACTACCATCGAGGCCTCCAATGACCTTTTGGATGATATACCTGATGATG CCTTTGACTCAGACCTGTCAATGTCGCCGCCTCCTGCGCCCCAGCCTCGC CCGGCGGCTCGGTCATTCACACAGTCAACGAATCGCCCACTAGGTGTCCG CCAAACCACACTATTTGGTATGGTTGCTAGAAACCCAGAAAATCAGCCAC CACGCGGTGAACAGGTGTACTCCCCGCCTGAGAAAAGCGAGCCACCTACT CAGCATAAACTTAACCAGGAAGCCTTGGGTACGTGGGTTTACCCTACAAA TCTGGGTAAAACTCGAGACTATCAGTTCAATATTGCACAGAAAGGCCTCT TTCACAATTTGCTTGTAGCCCTACCCACGGGCCTTGGAAAAACGTTCATT GCAGCTACTATCATGCTCAACTGGTTTCGATGGACGAAGGACGCTCAGAT CGTCTTTGTTGCGCCTACAAAACCGCTAGTTGCCCAGCAGATTTCTGCAT GCTTTGAGGTCGCTGGAATCCCAAGATCCCAGACCACTATGCTCACGGGG GAGGCTGCTCCGGGAATCCGAGCCGAAGAATGGAAGGCGAAACGGGTGTT CTTCATGACACCTCAAACCTTGATCAACGACCTCAAAACCGGGATTGCAG ATCCGAAGCGGATTGTCCTAGTCGTTGTCGACGAAGCTCATCGTGCAACC GGTGGTTATGCATATGTCGAGGTTGTCAAGTTCCTGCGGCGGTACAATCA GAGCTTCCGCGTCCTGGCTTTGACAGCTACGCCAGGCTCAACGGTGGAAT CTGTTCAGGCTGTCATTGACGGCCTCGATATATCGAGAGTCGAGATACGG ACAGAGCAGTCACTCGATATCAGAGAGTATGTACATTCGAAAGACACGGA TGTGCAGACATTCCAGAATTCAGAGGAGATGGTCCTTTGCATGGACCTGA TGTCGAAAGCTCTACAGCCACTTCTTGATCAATTACGGAGTACAAATGCC TATTGGGGCCGTGACCCCATGGGTCTCACAGCATACGGACTCACCAAAGC CAGACAGCAATGGATGCTGTCCGACTCCGGCAGGAACGCCCATTTCGGCG TGAAGGCCAAAATGAATGCAATTTTCACGGTTCTAGCCAGCTTGGCTCAT GGCATCGATCTTCTCAAATACCATGGGATTACACCCTTTTACCGTCATCT TCTGCATTTCCAATCCAACACCGAGGGACAAAAGGGCGGCAAGTATCAGC GGCAAGTCGTTCAGGATGAGAGCTACAAAAAGCTCATGAACCATTTGCAG CCGTGGACAAAGAATCCAGAGTTCATTGGACACCCCAAGTTGGAGTATCT GAAGCAGGTAGTGTTGAATCATTTCATGGATGCTGGTGAAGGCTCTGGGG CAGACGAAAACAAGGACCAACCAGCCACTCGCGTGATGATATTCGTACAC TTCCGTGATAGCGCAGAAGAGGTCACGAGAGTACTCAAGAGATACGAGCC CATGATTCGGCCCCATGTCTTCGTGGGGCAGAGTAGCGCCAAAGGCTCGG AAGGAATGGGACAGAAAACACAACTCGACATTGTGCAGAAGTTCAAAAAG GGTACCTACAACACCATCGTTGCAACTTCAATCGGCGAGGAAGGTTTGGA TATCGGTGAGGTAGACCTCATCGTGTGTTACGACTCTTCAGCTTCGCCTA TTCGTATGCTTCAGCGCATGGGACGTACCGGTCGAAAGAGATCAGGAAAA ATCACGCTCCTACTCATGCAAGGCAAAGAAGAAGAGTCCTACATCAAGGC CAAGGACAATTACGAAAAGATGCAGCAGATGATAGCCAGTGGCACCCGAT TCACCTTCCACGATGACATGTCTCCGCGGATCTTGCCCCCGGGTGTGCGG CCTGTTGCTGATAAACGAGCGATTGATATTCCCGAGGAGAACACTGTGCG AGATCTACCAGAGCCGAAACGACGCGGCCGGGCACCGAAGAGGCCGCCGA AGAAATTCCATATGCCTGATAATGTCGAAACCGGGTTCACTACGGCATCG CATTTGGCCGGGACCTCGAAGCGCAAAGTACCAAATAAAACAAAAAGAAC TTGAATGTTCACCCTTGATGGTGACTCCTCTGACTATTTCGACGATGATC TGGGCGACTTGGGCGTCGACCGGCCTTCGGATGCGACTGACCCTGACACT CCCCCACCAGCCAAGCGCCGTCGTCTAAGAGCCGGTAAAGATGCATCAAA CGCAGACCTGCAATCGCATCAGAAGCCACGTGCAGAGCGTGGTGATGGTG CTAGAACAGCGCTAAGCTCGGACTCGTTTATCGACTATGATGATGACGAA GTGCCATCTCCCGAACGAGAGTCACCCTACTTCCAAGACGATAGTGAACG GGAGGCACGGTCCAAATACAAAGTCTTCGCTCCCAAGAACGCAAACATCC AGGAGAACATCTTTGTGACACAGCTAACACAACCTCCCTCTCCGCCGGAA ATGCTTCGTGGTCCCCGGTGGAAGAAGCCTGATCCTGGCTTGCCAACCCG AACTGTTGCCACCCCGCTACCAGAGACAACTCAAAGCAGAGAATCTGCTG CTGGTGATAGAGATGATGAGTATGATGATGATGAAGAGATGAAAGCGGCG ATTGAGGCATCGTTGCAATCATTCGAGGAAGAAACGTCAAGACCAGCTCC CTCCGTGCCTTTACAAAAGCCCCCATCATCTACTCCCATTATTGGACAAC AGAGCACTACCATCGAGGCCTCCAATGACCTTTTGGATGATATACCTGAT GATGCCTTTGACTCAGACCTGTCAATGTCGCCGCCTCCTGCGCCCCAGCC TCGCCCGGCGGCTCGGTCATTCACACAGTCAACGAATCGCCCACTAGGTG TCCGCCAAACCACACTATTTGGTATGGTTGCTAGAAACCCAGAAAATCAG CCACCACGCGGTGAACAGGTGTACTCCCCGCCTGAGAAAAGCGAGCCACC TACTCAGCATAAACTTAACCAGGAAGCCTTGGGTACGTGGGTTTACCCTA CAAATCTGGGTAAAACTCGAGACTATCAGTTCAATATTGCACAGAAAGGC CTCTTTCACAATTTGCTTGTAGCCCTACCCACGGGCCTTGGAAAAACGTT CATTGCAGCTACTATCATGCTCAACTGGTTTCGATGGACGAAGGACGCTC AGATCGTCTTTGTTGCGCCTACAAAACCGCTAGTTGCCCAGCAGATTTCT GCATGCTTTGAGGTCGCTGGAATCCCAAGATCCCAGACCACTATGCTCAC GGGGGAGGCTGCTCCGGGAATCCGAGCCGAAGAATGGAAGGCGAAACGGG TGTTCTTCATGACACCTCAAACCTTGATCAACGACCTCAAAACCGGGATT GCAGATCCGAAGCGGATTGTCCTAGTCGTTGTCGACGAAGCTCATCGTGC AACCGGTGGTTATGCATATGTCGAGGTTGTCAAGTTCCTGCGGCGGTACA ATCAGAGCTTCCGCGTCCTGGCTTTGACAGCTACGCCAGGCTCAACGGTG GAATCTGTTCAGGCTGTCATTGACGGCCTCGATATATCGAGAGTCGAGAT ACGGACAGAGCAGTCACTCGATATCAGAGAGTATGTACATTCGAAAGACA CGGATGTGCAGACATTCCAGAATTCAGAGGAGATGGTCCTTTGCATGGAC CTGATGTCGAAAGCTCTACAGCCACTTCTTGATCAATTACGGAGTACAAA TGCCTATTGGGGCCGTGACCCCATGGGTCTCACAGCATACGGACTCACCA AAGCCAGACAGCAATGGATGCTGTCCGACTCCGGCAGGAACGCCCATTTC GGCGTGAAGGCCAAAATGAATGCAATTTTCACGGTTCTAGCCAGCTTGGC TCATGGCATCGATCTTCTCAAATACCATGGGATTACACCCTTTTACCGTC ATCTTCTGCATTTCCAATCCAACACCGAGGGACAAAAGGGCGGCAAGTAT CAGCGGCAAGTCGTTCAGGATGAGAGCTACAAAAAGCTCATGAACCATTT GCAGCCGTGGACAAAGAATCCAGAGTTCATTGGACACCCCAAGTTGGAGT ATCTGAAGCAGGTAGTGTTGAATCATTTCATGGATGCTGGTGAAGGCTCT GGGGCAGACGAAAACAAGGACCAACCAGCCACTCGCGTGATGATATTCGT ACACTTCCGTGATAGCGCAGAAGAGGTCACGAGAGTACTCAAGAGATACG AGCCCATGATTCGGCCCCATGTCTTCGTGGGGCAGAGTAGCGCCAAAGGC TCGGAAGGAATGGGACAGAAAACACAACTCGACATTGTGCAGAAGTTCAA AAAGGGTACCTACAACACCATCGTTGCAACTTCAATCGGCGAGGAAGGTT TGGATATCGGTGAGGTAGACCTCATCGTGTGTTACGACTCTTCAGCTTCG CCTATTCGTATGCTTCAGCGCATGGGACGTACCGGTCGAAAGAGATCAGG AAAAATCACGCTCCTACTCATGCAAGGCAAAGAAGAAGAGTCCTACATCA AGGCCAAGGACAATTACGAAAAGATGCAGCAGATGATAGCCAGTGGCACC CGATTCACCTTCCACGATGACATGTCTCCGCGGATCTTGCCCCCGGGTGT GCGGCCTGTTGCTGATAAACGAGCGATTGATATTCCCGAGGAGAACACTG TGCGAGATCTACCAGAGCCGAAACGACGCGGCCGGGCACCGAAGAGGCCG CCGAAGAAATTCCATATGCCTGATAATGTCGAAACCGGGTTCACTACGGC ATCGCATTTGGCCGGGACCTCGAAGCGCAAAGTACCAAATAAAACAAAAA GAACTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0016787 | hydrolase activity |
GO:0005524 | ATP binding |
GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_010239-T1.utr5p1 | KJC3_010239-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_010239-T1.utr3p1 | KJC3_010239-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG092614O9 |
DBxref | InterPro:IPR027417 |
DBxref | InterPro:IPR003903 |
DBxref | InterPro:IPR006935 |
DBxref | InterPro:IPR001650 |
DBxref | InterPro:IPR014001 |
DBxref | PFAM:PF04851 |
DBxref | PFAM:PF00271 |
DBxref | PFAM:PF00270 |
Product | 3'-5' DNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:2800245..2803918 + |
|