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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2800245..2803918+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010239-T1 ID=KJC3_010239-T1|Name=KJC3_010239-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3674bp|location=Sequence derived from alignment at ch7:2800245..2803918+ (Aspergillus niger KJC3)
CTTCGACGGTGGTCGGGGTTTTATCCTACGAAGCACCTCGGGTTCGCTAT
GTTCACCCTTGATGGTGACTCCTCTGACTATTTCGACGATGATCTGGGCG
ACTTGGGCGTCGACCGGCCTTCGGATGCGACTGACCCTGACACTCCCCCA
CCAGCCAAGCGCCGTCGTCTAAGAGCCGGTAAAGATGCATCAAACGCAGA
CCTGCAATCGCATCAGAAGCCACGTGCAGAGCGTGGTGATGGTGCTAGAA
CAGCGCTAAGCTCGGACTCGTTTATCGACTATGATGATGACGAAGTGCCA
TCTCCCGAACGAGAGTCACCCTACTTCCAAGACGATAGTGAACGGGAGGC
ACGGTCCAAATACAAAGTCTTCGCTCCCAAGAACGCAAACATCCAGGAGA
ACATCTTTGTGACACAGCTAACACAACCTCCCTCTCCGCCGGAAATGCTT
CGTGGTCCCCGGTGGAAGAAGCCTGATCCTGGCTTGCCAACCCGAACTGT
TGCCACCCCGCTACCAGAGACAACTCAAAGCAGAGAATCTGCTGCTGGTG
ATAGAGATGATGAGTATGATGATGATGAAGAGATGAAAGCGGCGATTGAG
GCATCGTTGCAATCATTCGAGGAAGAAACGTCAAGACCAGCTCCCTCCGT
GCCTTTACAAAAGCCCCCATCATCTACTCCCATTATTGGACAACAGAGCA
CTACCATCGAGGCCTCCAATGACCTTTTGGATGATATACCTGATGATGCC
TTTGACTCAGACCTGTCAATGTCGCCGCCTCCTGCGCCCCAGCCTCGCCC
GGCGGCTCGGTCATTCACACAGTCAACGAATCGCCCACTAGGTGTCCGCC
AAACCACACTATTTGGTATGGTTGCTAGAAACCCAGAAAATCAGCCACCA
CGCGGTGAACAGGTGTACTCCCCGCCTGAGAAAAGCGAGCCACCTACTCA
GCATAAACTTAACCAGGAAGCCTTGGGTACGTGGGTTTACCCTACAAATC
TGGGTAAAACTCGAGACTATCAGTTCAATATTGCACAGAAAGGCCTCTTT
CACAATTTGCTTGTAGCCCTACCCACGGGCCTTGGAAAAACGTTCATTGC
AGCTACTATCATGCTCAACTGGTTTCGATGGACGAAGGACGCTCAGATCG
TCTTTGTTGCGCCTACAAAACCGCTAGTTGCCCAGCAGATTTCTGCATGC
TTTGAGGTCGCTGGAATCCCAAGATCCCAGACCACTATGCTCACGGGGGA
GGCTGCTCCGGGAATCCGAGCCGAAGAATGGAAGGCGAAACGGGTGTTCT
TCATGACACCTCAAACCTTGATCAACGACCTCAAAACCGGGATTGCAGAT
CCGAAGCGGATTGTCCTAGTCGTTGTCGACGAAGCTCATCGTGCAACCGG
TGGTTATGCATATGTCGAGGTTGTCAAGTTCCTGCGGCGGTACAATCAGA
GCTTCCGCGTCCTGGCTTTGACAGCTACGCCAGGCTCAACGGTGGAATCT
GTTCAGGCTGTCATTGACGGCCTCGATATATCGAGAGTCGAGATACGGAC
AGAGCAGTCACTCGATATCAGAGAGTATGTACATTCGAAAGACACGGATG
TGCAGACATTCCAGAATTCAGAGGAGATGGTCCTTTGCATGGACCTGATG
TCGAAAGCTCTACAGCCACTTCTTGATCAATTACGGAGTACAAATGCCTA
TTGGGGCCGTGACCCCATGGGTCTCACAGCATACGGACTCACCAAAGCCA
GACAGCAATGGATGCTGTCCGACTCCGGCAGGAACGCCCATTTCGGCGTG
AAGGCCAAAATGAATGCAATTTTCACGGTTCTAGCCAGCTTGGCTCATGG
CATCGATCTTCTCAAATACCATGGGATTACACCCTTTTACCGTCATCTTC
TGCATTTCCAATCCAACACCGAGGGACAAAAGGGCGGCAAGTATCAGCGG
CAAGTCGTTCAGGATGAGAGCTACAAAAAGCTCATGAACCATTTGCAGCC
GTGGACAAAGAATCCAGAGTTCATTGGACACCCCAAGTTGGAGTATCTGA
AGCAGGTAGTGTTGAATCATTTCATGGATGCTGGTGAAGGCTCTGGGGCA
GACGAAAACAAGGACCAACCAGCCACTCGCGTGATGATATTCGTACACTT
CCGTGATAGCGCAGAAGAGGTCACGAGAGTACTCAAGAGATACGAGCCCA
TGATTCGGCCCCATGTCTTCGTGGGGCAGAGTAGCGCCAAAGGCTCGGAA
GGAATGGGACAGAAAACACAACTCGACATTGTGCAGAAGTTCAAAAAGGG
TACCTACAACACCATCGTTGCAACTTCAATCGGCGAGGAAGGTTTGGATA
TCGGTGAGGTAGACCTCATCGTGTGTTACGACTCTTCAGCTTCGCCTATT
CGTATGCTTCAGCGCATGGGACGTACCGGTCGAAAGAGATCAGGAAAAAT
CACGCTCCTACTCATGCAAGGCAAAGAAGAAGAGTCCTACATCAAGGCCA
AGGACAATTACGAAAAGATGCAGCAGATGATAGCCAGTGGCACCCGATTC
ACCTTCCACGATGACATGTCTCCGCGGATCTTGCCCCCGGGTGTGCGGCC
TGTTGCTGATAAACGAGCGATTGATATTCCCGAGGAGAACACTGTGCGAG
ATCTACCAGAGCCGAAACGACGCGGCCGGGCACCGAAGAGGCCGCCGAAG
AAATTCCATATGCCTGATAATGTCGAAACCGGGTTCACTACGGCATCGCA
TTTGGCCGGGACCTCGAAGCGCAAAGTACCAAATAAAAGTAAGGCTCGAA
CGCCGACTCCAGAGCCCGTGGAATTACCGGCGCTTGAAGATGTCCTGCTT
ACCCCGGCGCAGCAAAAAGAACTTGAACTCCATTACAGCAACGCCGGGCC
CAGTGAAGAGCTTTTGGTCAGTTATCCCAGAAGCGACGCCTTCCCACGCC
TTCAGCTTGCGCCTAGACCTACGAAAGCGGTTAGGCACGGGTCATTAACT
CGTCGCATGATTGAAACGTTGCAGAAGATGGACCAGATCACTCCAGACTG
TGGAGATCGATACAAGGGGATCTTAGCGCGTGAGAAAGCCTCCATGCCAA
AAGCCTCGATAGTAGCGCCTAAGCCCAACGGCCGTGGGGAGGCTCAGTCG
AGGACCAAAGCAAGGCACACATCCAAGGTGGTGTCATCCAAGCCAAGGAA
TCAGGAAGAGCAGGATGTGACTGAAGTACAACGAACCCCACCAGGCAAGC
ACTCAGTATCAGCGACTAACGCTGAAGTGGAACCGTTCTACTGCTCGCAG
AGGACCCAAGATGGAGATACAGACGATGATTTTGACCTTCCTGATGTCTC
TACTCTGTTGAATAGGAGTGTGGAGAGGCCCTCGAAACGGGGCCGGTTTG
TTCTGGATGATAGTGATGACTGATTTGGACATGAACGCATAGCTTGGTTA
ACATTCTGCATTGGTAGTACTTTCGGTTGCATATACCCTTGGGCAATATA
CTTTGAAGATTACGGTGGAGTTATTCTTTGATGCCATGCTAAATTTCTCC
TTAGAACACCGTTACTGAACTTGGTAGTTAAGACTAGGCGGACAGTAACT
GAGACCAGACGCAGGAATTCAGTTCAACCCGTTAGTTTACAATTGTATAA
CTCATAGAGTACTCAATGAAATCA back to topCoding sequence (CDS) from alignment at ch7:2800245..2803918+ >KJC3_010239-T1 ID=KJC3_010239-T1|Name=KJC3_010239-T1|organism=Aspergillus niger KJC3|type=CDS|length=5508bp|location=Sequence derived from alignment at ch7:2800245..2803918+ (Aspergillus niger KJC3)
ATGTTCACCCTTGATGGTGACTCCTCTGACTATTTCGACGATGATCTGGG
CGACTTGGGCGTCGACCGGCCTTCGGATGCGACTGACCCTGACACTCCCC
CACCAGCCAAGCGCCGTCGTCTAAGAGCCGGTAAAGATGCATCAAACGCA
GACCTGCAATCGCATCAGAAGCCACGTGCAGAGCGTGGTGATGGTGCTAG
AACAGCGCTAAGCTCGGACTCGTTTATCGACTATGATGATGACGAAGTGC
CATCTCCCGAACGAGAGTCACCCTACTTCCAAGACGATAGTGAACGGGAG
GCACGGTCCAAATACAAAGTCTTCGCTCCCAAGAACGCAAACATCCAGGA
GAACATCTTTGTGACACAGCTAACACAACCTCCCTCTCCGCCGGAAATGC
TTCGTGGTCCCCGGTGGAAGAAGCCTGATCCTGGCTTGCCAACCCGAACT
GTTGCCACCCCGCTACCAGAGACAACTCAAAGCAGAGAATCTGCTGCTGG
TGATAGAGATGATGAGTATGATGATGATGAAGAGATGAAAGCGGCGATTG
AGGCATCGTTGCAATCATTCGAGGAAGAAACGTCAAGACCAGCTCCCTCC
GTGCCTTTACAAAAGCCCCCATCATCTACTCCCATTATTGGACAACAGAG
CACTACCATCGAGGCCTCCAATGACCTTTTGGATGATATACCTGATGATG
CCTTTGACTCAGACCTGTCAATGTCGCCGCCTCCTGCGCCCCAGCCTCGC
CCGGCGGCTCGGTCATTCACACAGTCAACGAATCGCCCACTAGGTGTCCG
CCAAACCACACTATTTGGTATGGTTGCTAGAAACCCAGAAAATCAGCCAC
CACGCGGTGAACAGGTGTACTCCCCGCCTGAGAAAAGCGAGCCACCTACT
CAGCATAAACTTAACCAGGAAGCCTTGGGTACGTGGGTTTACCCTACAAA
TCTGGGTAAAACTCGAGACTATCAGTTCAATATTGCACAGAAAGGCCTCT
TTCACAATTTGCTTGTAGCCCTACCCACGGGCCTTGGAAAAACGTTCATT
GCAGCTACTATCATGCTCAACTGGTTTCGATGGACGAAGGACGCTCAGAT
CGTCTTTGTTGCGCCTACAAAACCGCTAGTTGCCCAGCAGATTTCTGCAT
GCTTTGAGGTCGCTGGAATCCCAAGATCCCAGACCACTATGCTCACGGGG
GAGGCTGCTCCGGGAATCCGAGCCGAAGAATGGAAGGCGAAACGGGTGTT
CTTCATGACACCTCAAACCTTGATCAACGACCTCAAAACCGGGATTGCAG
ATCCGAAGCGGATTGTCCTAGTCGTTGTCGACGAAGCTCATCGTGCAACC
GGTGGTTATGCATATGTCGAGGTTGTCAAGTTCCTGCGGCGGTACAATCA
GAGCTTCCGCGTCCTGGCTTTGACAGCTACGCCAGGCTCAACGGTGGAAT
CTGTTCAGGCTGTCATTGACGGCCTCGATATATCGAGAGTCGAGATACGG
ACAGAGCAGTCACTCGATATCAGAGAGTATGTACATTCGAAAGACACGGA
TGTGCAGACATTCCAGAATTCAGAGGAGATGGTCCTTTGCATGGACCTGA
TGTCGAAAGCTCTACAGCCACTTCTTGATCAATTACGGAGTACAAATGCC
TATTGGGGCCGTGACCCCATGGGTCTCACAGCATACGGACTCACCAAAGC
CAGACAGCAATGGATGCTGTCCGACTCCGGCAGGAACGCCCATTTCGGCG
TGAAGGCCAAAATGAATGCAATTTTCACGGTTCTAGCCAGCTTGGCTCAT
GGCATCGATCTTCTCAAATACCATGGGATTACACCCTTTTACCGTCATCT
TCTGCATTTCCAATCCAACACCGAGGGACAAAAGGGCGGCAAGTATCAGC
GGCAAGTCGTTCAGGATGAGAGCTACAAAAAGCTCATGAACCATTTGCAG
CCGTGGACAAAGAATCCAGAGTTCATTGGACACCCCAAGTTGGAGTATCT
GAAGCAGGTAGTGTTGAATCATTTCATGGATGCTGGTGAAGGCTCTGGGG
CAGACGAAAACAAGGACCAACCAGCCACTCGCGTGATGATATTCGTACAC
TTCCGTGATAGCGCAGAAGAGGTCACGAGAGTACTCAAGAGATACGAGCC
CATGATTCGGCCCCATGTCTTCGTGGGGCAGAGTAGCGCCAAAGGCTCGG
AAGGAATGGGACAGAAAACACAACTCGACATTGTGCAGAAGTTCAAAAAG
GGTACCTACAACACCATCGTTGCAACTTCAATCGGCGAGGAAGGTTTGGA
TATCGGTGAGGTAGACCTCATCGTGTGTTACGACTCTTCAGCTTCGCCTA
TTCGTATGCTTCAGCGCATGGGACGTACCGGTCGAAAGAGATCAGGAAAA
ATCACGCTCCTACTCATGCAAGGCAAAGAAGAAGAGTCCTACATCAAGGC
CAAGGACAATTACGAAAAGATGCAGCAGATGATAGCCAGTGGCACCCGAT
TCACCTTCCACGATGACATGTCTCCGCGGATCTTGCCCCCGGGTGTGCGG
CCTGTTGCTGATAAACGAGCGATTGATATTCCCGAGGAGAACACTGTGCG
AGATCTACCAGAGCCGAAACGACGCGGCCGGGCACCGAAGAGGCCGCCGA
AGAAATTCCATATGCCTGATAATGTCGAAACCGGGTTCACTACGGCATCG
CATTTGGCCGGGACCTCGAAGCGCAAAGTACCAAATAAAACAAAAAGAAC
TTGAATGTTCACCCTTGATGGTGACTCCTCTGACTATTTCGACGATGATC
TGGGCGACTTGGGCGTCGACCGGCCTTCGGATGCGACTGACCCTGACACT
CCCCCACCAGCCAAGCGCCGTCGTCTAAGAGCCGGTAAAGATGCATCAAA
CGCAGACCTGCAATCGCATCAGAAGCCACGTGCAGAGCGTGGTGATGGTG
CTAGAACAGCGCTAAGCTCGGACTCGTTTATCGACTATGATGATGACGAA
GTGCCATCTCCCGAACGAGAGTCACCCTACTTCCAAGACGATAGTGAACG
GGAGGCACGGTCCAAATACAAAGTCTTCGCTCCCAAGAACGCAAACATCC
AGGAGAACATCTTTGTGACACAGCTAACACAACCTCCCTCTCCGCCGGAA
ATGCTTCGTGGTCCCCGGTGGAAGAAGCCTGATCCTGGCTTGCCAACCCG
AACTGTTGCCACCCCGCTACCAGAGACAACTCAAAGCAGAGAATCTGCTG
CTGGTGATAGAGATGATGAGTATGATGATGATGAAGAGATGAAAGCGGCG
ATTGAGGCATCGTTGCAATCATTCGAGGAAGAAACGTCAAGACCAGCTCC
CTCCGTGCCTTTACAAAAGCCCCCATCATCTACTCCCATTATTGGACAAC
AGAGCACTACCATCGAGGCCTCCAATGACCTTTTGGATGATATACCTGAT
GATGCCTTTGACTCAGACCTGTCAATGTCGCCGCCTCCTGCGCCCCAGCC
TCGCCCGGCGGCTCGGTCATTCACACAGTCAACGAATCGCCCACTAGGTG
TCCGCCAAACCACACTATTTGGTATGGTTGCTAGAAACCCAGAAAATCAG
CCACCACGCGGTGAACAGGTGTACTCCCCGCCTGAGAAAAGCGAGCCACC
TACTCAGCATAAACTTAACCAGGAAGCCTTGGGTACGTGGGTTTACCCTA
CAAATCTGGGTAAAACTCGAGACTATCAGTTCAATATTGCACAGAAAGGC
CTCTTTCACAATTTGCTTGTAGCCCTACCCACGGGCCTTGGAAAAACGTT
CATTGCAGCTACTATCATGCTCAACTGGTTTCGATGGACGAAGGACGCTC
AGATCGTCTTTGTTGCGCCTACAAAACCGCTAGTTGCCCAGCAGATTTCT
GCATGCTTTGAGGTCGCTGGAATCCCAAGATCCCAGACCACTATGCTCAC
GGGGGAGGCTGCTCCGGGAATCCGAGCCGAAGAATGGAAGGCGAAACGGG
TGTTCTTCATGACACCTCAAACCTTGATCAACGACCTCAAAACCGGGATT
GCAGATCCGAAGCGGATTGTCCTAGTCGTTGTCGACGAAGCTCATCGTGC
AACCGGTGGTTATGCATATGTCGAGGTTGTCAAGTTCCTGCGGCGGTACA
ATCAGAGCTTCCGCGTCCTGGCTTTGACAGCTACGCCAGGCTCAACGGTG
GAATCTGTTCAGGCTGTCATTGACGGCCTCGATATATCGAGAGTCGAGAT
ACGGACAGAGCAGTCACTCGATATCAGAGAGTATGTACATTCGAAAGACA
CGGATGTGCAGACATTCCAGAATTCAGAGGAGATGGTCCTTTGCATGGAC
CTGATGTCGAAAGCTCTACAGCCACTTCTTGATCAATTACGGAGTACAAA
TGCCTATTGGGGCCGTGACCCCATGGGTCTCACAGCATACGGACTCACCA
AAGCCAGACAGCAATGGATGCTGTCCGACTCCGGCAGGAACGCCCATTTC
GGCGTGAAGGCCAAAATGAATGCAATTTTCACGGTTCTAGCCAGCTTGGC
TCATGGCATCGATCTTCTCAAATACCATGGGATTACACCCTTTTACCGTC
ATCTTCTGCATTTCCAATCCAACACCGAGGGACAAAAGGGCGGCAAGTAT
CAGCGGCAAGTCGTTCAGGATGAGAGCTACAAAAAGCTCATGAACCATTT
GCAGCCGTGGACAAAGAATCCAGAGTTCATTGGACACCCCAAGTTGGAGT
ATCTGAAGCAGGTAGTGTTGAATCATTTCATGGATGCTGGTGAAGGCTCT
GGGGCAGACGAAAACAAGGACCAACCAGCCACTCGCGTGATGATATTCGT
ACACTTCCGTGATAGCGCAGAAGAGGTCACGAGAGTACTCAAGAGATACG
AGCCCATGATTCGGCCCCATGTCTTCGTGGGGCAGAGTAGCGCCAAAGGC
TCGGAAGGAATGGGACAGAAAACACAACTCGACATTGTGCAGAAGTTCAA
AAAGGGTACCTACAACACCATCGTTGCAACTTCAATCGGCGAGGAAGGTT
TGGATATCGGTGAGGTAGACCTCATCGTGTGTTACGACTCTTCAGCTTCG
CCTATTCGTATGCTTCAGCGCATGGGACGTACCGGTCGAAAGAGATCAGG
AAAAATCACGCTCCTACTCATGCAAGGCAAAGAAGAAGAGTCCTACATCA
AGGCCAAGGACAATTACGAAAAGATGCAGCAGATGATAGCCAGTGGCACC
CGATTCACCTTCCACGATGACATGTCTCCGCGGATCTTGCCCCCGGGTGT
GCGGCCTGTTGCTGATAAACGAGCGATTGATATTCCCGAGGAGAACACTG
TGCGAGATCTACCAGAGCCGAAACGACGCGGCCGGGCACCGAAGAGGCCG
CCGAAGAAATTCCATATGCCTGATAATGTCGAAACCGGGTTCACTACGGC
ATCGCATTTGGCCGGGACCTCGAAGCGCAAAGTACCAAATAAAACAAAAA
GAACTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
| GO:0005524 | ATP binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010239-T1.utr5p1 | KJC3_010239-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010239-T1.utr3p1 | KJC3_010239-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092614O9 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR003903 |
| DBxref | InterPro:IPR006935 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | 3'-5' DNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2800245..2803918 + |
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