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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2815635..2817963+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010246-T1 ID=KJC3_010246-T1|Name=KJC3_010246-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2329bp|location=Sequence derived from alignment at ch7:2815635..2817963+ (Aspergillus niger KJC3)
CTCCTCTCCTACTATACATTCAAGAGAATTGTCTTTTCCCACCATGCACC
TATCCCTTGCAATTCCAGGCCTGACCGTCTATTGTCTCATCTACTCATCC
CTGCCATTGACTCTCCATTCTGCTCCAGCAGATGGCGGTGGTGGTTGTCC
ATGACGGTGACATAAGCCTGCCGTGACGTCACGGCTGAGCATTGCCGCCA
GCCAAATTCCAGCCGGTGATGCTCGCAACCATCATGGATCCCTTCTTGTG
TTGCTTTTGGGGCCCTGCCGGTTCCACTATCCAGCAATTGCCATACCGTG
ACGTCAGCATCTGCCTCATGACTCTCCATCGGCATCCCGATATCTCTGTC
GCGCCTTCATTTCTTATCTCGACCCATCTGTCCCCCCGCACCATCTTTCT
ATAGTGCACCAGGGTGAAGAAAAGCACAATGGTGTCCCTTAAGTTTAGAC
GAAGCGACGAGTCCGACAGGACCGGTGAGCAGCGCGACCGAGAGGATGAG
CGACGACACGACGAGCCGGATGAGCGTACACGACTGCTCCCGCGCGAGCC
CCCGGCCTATCTGAGCCCCGATGATCCTGCTGTGAGTTTCGCATAGAAAC
ACTCCCTTCGCTTGGAAGATGGCTAACACCAGGCTCTGTAGGTCTCTCCC
TACAATCTCTGGGGCATACGAGCCCTGCGAGGCCTCTCCTCCCTCTTCCT
CGCCATTAGCTTCATCTGGTGGACCTTTCTTCTCGTCTCCCTTTTCGTCA
GTCCACCCATGATGCACTCGCGCGGATCCGGATTCTTCAGTTTCGCCTAT
ACCACTCTGACAACCGGATATCTTCTTCTCGGGCTCCTATTCTTCGCTAT
CCCGTCCAAACCCATGTCCGTGTCCGGAATTATCATCGCCATCTTCCTCC
TCATTGACATGATCCTCACTCTAGCCGTCCCTCGCATTCGGCTTGAAGAA
GGCTGGGTGGGAGTTGCATCGGTAGTCTGGGCGGCCTTCATCTCTCTCTA
TACAATTGCTCAGAACCACTCCGTGGCTTGGGGTAAGCGGGAGGAAGAAG
AGCGCCTGACAGGGCGGCCGGAAACCCGCCGTCCCCTGCGCGAATGGGTC
GCTGTTCTCATTCAAACTGTCTTCCTGGTCATCTTCGCCATCATTGTCGT
CCTGTTTACCGCCACCCTGATTCTTCGCGCCCGCGACGCATCTCTCCCCG
CTCCCGGCAAGAAATACTACGTCAACGGCGACAGCTACCAAGTTCACCTT
CACTGCGTCGGTAACACTACCCACAGTCTCCAGAATGACATGCCGACGAT
CCTCATTGAAGGCGGAGACTGGCCCGTCGAACATACTCTACAGCCCTTCA
TCCATGATGCATACCAGTCCGGTCTCGTCCCTCGCTACTGCTACTGGGAT
CGTCCCGGTTTCGGCTGGTCTGACAACGCTCCTTCCCCCTTCTCCGCCGG
CATGGCAGCAGACGCCCTATCCGAAGCACTCGCTCTCGCCGGCGAAGAGG
GTCCCTGGATCCTCGTCTCCGCCAGCGTTGGCGGCATCTACAGCCGCATC
TTCGCTAGTCGTCACCTGCTCGAGGTTTCCGGGATTCTTCTTATCGACAG
TCTTCACGAAGACTACCTCAGTAACATCGGCTCCCCCGGCCGCGGCTTCA
CCCTTTGGCTTCGCGGCGTCTTCTCCCCGCTGGGACTGGACCGTATCGCC
GGTGCCATTTTCAAGGGACGCACGCGCGAAGACCGCGTCTACGGGCGCAG
CTCTTACCAAACGGGGAAGGTTGTCAAGGCGAAACTACAGGAGAACCTCG
TTGCTGAGTCGATGACCTCCTCGGAGATCCAGACTGCCAGACACGTCCAG
ATGGCGGATACGCCACTCGTGGTGATTAGCTCAGGTGTCGAGGTGCGGAA
GAGCGAGAAGTGGGCGAAGAGACAGGAGGAGTTGACGAAAATTACGAAGA
ATCTCAAGAACTTCGATATTGTGAAGGGTGCGCCGCACGAGGTTTGGCGG
GATGTGGAGGGGAGGAGAGTTATTGAGAAGAGATTGGGTGAATTAATTGG
AAAGGATGAGTAGGAACTGTATCTTCTTAACATCATTTCTGGCCTTCTTT
TTCTTCTTTTCTCTCATATTGTGTTTGTTTTCGTCTTTCCCTTTTCGGCT
CATTTTATTTCTCTGCCGCTACCGTCTCTCCACTTATCTATCTATTCCCC
TGTTTATTACTCCGACATAACCTTTTGAAATTGTCATGAATTTACGAAAT
TGACGACACATTACGCCCTTACTTTTTTTTTCCATACTGTACGATATGTA
CTATATGATACGTACTCAGCTCAACTAGT back to topCoding sequence (CDS) from alignment at ch7:2815635..2817963+ >KJC3_010246-T1 ID=KJC3_010246-T1|Name=KJC3_010246-T1|organism=Aspergillus niger KJC3|type=CDS|length=3150bp|location=Sequence derived from alignment at ch7:2815635..2817963+ (Aspergillus niger KJC3)
ATGGTGTCCCTTAAGTTTAGACGAAGCGACGAGTCCGACAGGACCGGTGA
GCAGCGCGACCGAGAGGATGAGCGACGACACGACGAGCCGGATGAGCGTA
CACGACTGCTCCCGCGCGAGCCCCCGGCCTATCTGAGCCCCGATGATCCT
GCTGTCTCTCCCTACAATCTCTGGGGCATACGAGCCCTGCGAGGCCTCTC
CTCCCTCTTCCTCGCCATTAGCTTCATCTGGTGGACCTTTCTTCTCGTCT
CCCTTTTCGTCAGTCCACCCATGATGCACTCGCGCGGATCCGGATTCTTC
AGTTTCGCCTATACCACTCTGACAACCGGATATCTTCTTCTCGGGCTCCT
ATTCTTCGCTATCCCGTCCAAACCCATGTCCGTGTCCGGAATTATCATCG
CCATCTTCCTCCTCATTGACATGATCCTCACTCTAGCCGTCCCTCGCATT
CGGCTTGAAGAAGGCTGGGTGGGAGTTGCATCGGTAGTCTGGGCGGCCTT
CATCTCTCTCTATACAATTGCTCAGAACCACTCCGTGGCTTGGGGTAAGC
GGGAGGAAGAAGAGCGCCTGACAGGGCGGCCGGAAACCCGCCGTCCCCTG
CGCGAATGGGTCGCTGTTCTCATTCAAACTGTCTTCCTGGTCATCTTCGC
CATCATTGTCGTCCTGTTTACCGCCACCCTGATTCTTCGCGCCCGCGACG
CATCTCTCCCCGCTCCCGGCAAGAAATACTACGTCAACGGCGACAGCTAC
CAAGTTCACCTTCACTGCGTCGGTAACACTACCCACAGTCTCCAGAATGA
CATGCCGACGATCCTCATTGAAGGCGGAGACTGGCCCGTCGAACATACTC
TACAGCCCTTCATCCATGATGCATACCAGTCCGGTCTCGTCCCTCGCTAC
TGCTACTGGGATCGTCCCGGTTTCGGCTGGTCTGACAACGCTCCTTCCCC
CTTCTCCGCCGGCATGGCAGCAGACGCCCTATCCGAAGCACTCGCTCTCG
CCGGCGAAGAGGGTCCCTGGATCCTCGTCTCCGCCAGCGTTGGCGGCATC
TACAGCCGCATCTTCGCTAGTCGTCACCTGCTCGAGGTTTCCGGGATTCT
TCTTATCGACAGTCTTCACGAAGACTACCTCAGTAACATCGGCTCCCCCG
GCCGCGGCTTCACCCTTTGGCTTCGCGGCGTCTTCTCCCCGCTGGGACTG
GACCGTATCGCCGGTGCCATTTTCAAGGGACGCACGCGCGAAGACCGCGT
CTACGGGCGCAGCTCTTACCAAACGGGGAAGGTTGTCAAGGCGAAACTAC
AGGAGAACCTCGTTGCTGAGTCGATGACCTCCTCGGAGATCCAGACTGCC
AGACACGTCCAGATGGCGGATACGCCACTCGTGGTGATTAGCTCAGGTGT
CGAGGTGCGGAAGAGCGAGAAGTGGGCGAAGAGACAGGAGGAGTTGACGA
AAATTACGAAGAATCTCAAGAACTTCGATATTGTGAAGGGTGCGCCGCAC
GAGGTTTGGCGGGATGTGGAGGGGAGGAGAGTTATTGAGAAGAGATTGGG
TGAATTAATTGGAAAGGATGAGTAGATGGTGTCCCTTAAGTTTAGACGAA
GCGACGAGTCCGACAGGACCGGTGAGCAGCGCGACCGAGAGGATGAGCGA
CGACACGACGAGCCGGATGAGCGTACACGACTGCTCCCGCGCGAGCCCCC
GGCCTATCTGAGCCCCGATGATCCTGCTGTCTCTCCCTACAATCTCTGGG
GCATACGAGCCCTGCGAGGCCTCTCCTCCCTCTTCCTCGCCATTAGCTTC
ATCTGGTGGACCTTTCTTCTCGTCTCCCTTTTCGTCAGTCCACCCATGAT
GCACTCGCGCGGATCCGGATTCTTCAGTTTCGCCTATACCACTCTGACAA
CCGGATATCTTCTTCTCGGGCTCCTATTCTTCGCTATCCCGTCCAAACCC
ATGTCCGTGTCCGGAATTATCATCGCCATCTTCCTCCTCATTGACATGAT
CCTCACTCTAGCCGTCCCTCGCATTCGGCTTGAAGAAGGCTGGGTGGGAG
TTGCATCGGTAGTCTGGGCGGCCTTCATCTCTCTCTATACAATTGCTCAG
AACCACTCCGTGGCTTGGGGTAAGCGGGAGGAAGAAGAGCGCCTGACAGG
GCGGCCGGAAACCCGCCGTCCCCTGCGCGAATGGGTCGCTGTTCTCATTC
AAACTGTCTTCCTGGTCATCTTCGCCATCATTGTCGTCCTGTTTACCGCC
ACCCTGATTCTTCGCGCCCGCGACGCATCTCTCCCCGCTCCCGGCAAGAA
ATACTACGTCAACGGCGACAGCTACCAAGTTCACCTTCACTGCGTCGGTA
ACACTACCCACAGTCTCCAGAATGACATGCCGACGATCCTCATTGAAGGC
GGAGACTGGCCCGTCGAACATACTCTACAGCCCTTCATCCATGATGCATA
CCAGTCCGGTCTCGTCCCTCGCTACTGCTACTGGGATCGTCCCGGTTTCG
GCTGGTCTGACAACGCTCCTTCCCCCTTCTCCGCCGGCATGGCAGCAGAC
GCCCTATCCGAAGCACTCGCTCTCGCCGGCGAAGAGGGTCCCTGGATCCT
CGTCTCCGCCAGCGTTGGCGGCATCTACAGCCGCATCTTCGCTAGTCGTC
ACCTGCTCGAGGTTTCCGGGATTCTTCTTATCGACAGTCTTCACGAAGAC
TACCTCAGTAACATCGGCTCCCCCGGCCGCGGCTTCACCCTTTGGCTTCG
CGGCGTCTTCTCCCCGCTGGGACTGGACCGTATCGCCGGTGCCATTTTCA
AGGGACGCACGCGCGAAGACCGCGTCTACGGGCGCAGCTCTTACCAAACG
GGGAAGGTTGTCAAGGCGAAACTACAGGAGAACCTCGTTGCTGAGTCGAT
GACCTCCTCGGAGATCCAGACTGCCAGACACGTCCAGATGGCGGATACGC
CACTCGTGGTGATTAGCTCAGGTGTCGAGGTGCGGAAGAGCGAGAAGTGG
GCGAAGAGACAGGAGGAGTTGACGAAAATTACGAAGAATCTCAAGAACTT
CGATATTGTGAAGGGTGCGCCGCACGAGGTTTGGCGGGATGTGGAGGGGA
GGAGAGTTATTGAGAAGAGATTGGGTGAATTAATTGGAAAGGATGAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010246-T1.utr5p1 | KJC3_010246-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010246-T1.utr3p1 | KJC3_010246-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261YRA |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR019431 |
| DBxref | PFAM:PF10329 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2815635..2817963 + |
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