You are here

Home

KJC3_010269-T1, KJC3_010269-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010269-T1
Unique NameKJC3_010269-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2874303..2876906+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010269-T1 ID=KJC3_010269-T1|Name=KJC3_010269-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2604bp|location=Sequence derived from alignment at ch7:2874303..2876906+ (Aspergillus niger KJC3)
ACGTCGACTTTCTGCTTCTCCGCTTCGTCTGCTTTCTTCCTAGTTCTTAC
TCCAGACGGGCTCCCCTCCAACTGCTGGTCTGTCTCCCTCTCACACACTC
GTGCATCGCAGCGTTTTCAGGGTGCGTGTGTTGGACAGTCCGATGAAGGT
ATCTCTCGCCTTCCTTACTCCCAAGCGCGCTTGTTATCTGTAGCAACAGC
AGGTGGATCATCTCTCGACTCGCAACTGGTCGGGTCGTGTGCTCTGCTTC
CAAGATCTGTTTCCATCTCTTAATATCCCACCACTCCTCGCGTGTGATAC
TGTGAGAGTGCGACTCATGATTGGATTTGGGGTCCTGTTTCAAGCACTCC
CCAGCCATTTCATTATTATAGAACCGTCGATCCTGGCATGGTCGTCCTTG
CCACCGCCTCCCGCACCGCAACGATCGCACCCAGGCCGACGACTAATCCA
TCCAAGATGCTAGTTACATCATCACCTGTGTCCATCCTCAAAACGCCTAA
GAGCACCCCATCCACGACTGGGATTAAGCACAGGATGATGATGGGAGACG
ACTACAGCGATCTCTCCCTGTCCCCGTCGTCCTCGTCCGACGCGGAACAC
AGCCCGAGTCCCCGGAAGCGGACGCGAGTGAAGTTTGATAAGGAGGTGTT
CATGGTACCATATAAAGAGGAACCTGAGCCGGAACGGAAACCAGAGAAGA
GCGCAGCCGTCGTCCGCGAGGAGGTGCGCAGGGCCATCCAACGGCATGTC
TCTGGCACCGACAGCGAGGCGTACGACCGCATCAAGGAGACTTTTGCGGT
GGACCCGCGGCGCCGGGATGAGGACAACATGTTTGCCTACGATGTACCTA
CACATACGTCCTTGAGACATCATCTCCTGGGTCTTTTGTCAAATGTTGCG
TCCTTGGATCGCACTTGCAACGGACTGGTCCAAGCTGTGCTGAATAGCGT
ATGGCTGGGCCGGGATGAGTCGTACATCAAGTTGTATATACGCTTTCTCG
GTAACCTTGCCGCTGCCCAGGGCAGCTATCTGGGGGCTGTGCTCAAAATG
CTGGTCAACTATCTGGGAGAGCTTCCCAAGGACACGGGGAAGATCCCGGG
TTACCCGTCTGTTCATGTGCCGGTGCTCTACTCCCGCGTGCACTTGGCTT
TGCGCCATGTCATGCAGTTGATTCCGTCTGGTAGTGGAACGCTGTCGCCT
CTTTTGTCTGCACAGTTTCCTTTTGCTTCCGATTCGGCCAAGGCCAACAT
TGCGTATACGCGGAATCTCATCCGGGTGATCAGCTATGCCCCGGAGCTTC
AGGGTGATATTCTTTCCCTGATAACGGAAAAGCTAGTCAAGATTGACGTC
CACATCCAAGTGGATCTAGAGGACATCGAGGATGAAGTCGGTGAGGATGT
CCTGCAGGGAGTCTCTCCGGAATCAGTCATGATCGAGGAAGATGATGCGG
ATGACGACGATGACAACGACTCCGTTCTTAGCGATGATTCGGTAGACGAT
GAATCCAAGCGGATCAAGGCCATTCGGGACAACATCCTCAAGCTGGATGG
CATGATTGACACCATGTTCGAATATTATGCCCCTCCGTTCACGCTGGGCT
CCCTGGACGACAAGGAAAATGCCTTCGATCTTCTGATGAGCCATTTCCAG
AACATTATTCTCCCCACGTACCGCTCGCGCCACTCTCAATTCCTTCTCTT
CCACTTCTCTCAGTCATCCCCAATTCTTGTGGACCGCTTCGCCGCGATGT
GCACCGAGCTTATCTTTAACAAGACGCAGCCAGCCATTATGCGCCAATCA
GCTGCTGCTTACCTCGCCAGCTTCGTTGCTCGCGGGGCCCATATTTCTGG
CGAGGTTGTCCGGGATGTGTTCGATCTGTTGGGCACGTATCTGAACAGTC
TTCGTCTGGATTATGAAGCCACTTGCCGGGGCCCCGACCTCCGCCGCTAT
GGCCCCTTCTACTCGACGGCTCAGGCCCTGCTCTACATCTTCTGCTTTCG
CTGGCGAGACCTGACCACCGCTGCGCTGGAGGGCGACACTCCGGACCAAG
TGGACGAGCTTGAGCCAGAAGACATCATGTTCCCGCCGTCAGTCAAGGAA
GTGCTGCACCAAGCCATCCACTCCAAGCTGAACCCGCTGAAGGTGTGCTC
GCCCGCGATCGTGTCCCAGTTCGCGCGGATGTCGCAGCACTTCAACTTGA
TGTACGTGTTCAGCATCCTCGAAACAAACAAGCGACTACGCGTATCCTCA
TACCGCAGCATCGGCGCCATGGCCGATCCTCGCTTCAGCCAAGTCGAGCG
GGAGATCCGCGCCGGCGACGACCTTGGCTACCAACTAGACGCCTACTTCC
CCTTTGACCCCTACCAGCTCCCGCGCAGCCGACGCTGGGTGGAAAACGAC
TACGTCCACTGGCGCGGCATCCCAGGTCTAGACGAAGACGACGACTCGGA
CAGCGAAGCGGACGACAACGAGTCGGACGAAGACCTCAGCGATGGGACCG
AAACGGATGACGAATTGTGATGCGTCCAAGACCTTCAAAAGAACAACTCA
AAAGTGCTTCTCTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTC
TCTC
back to top

Coding sequence (CDS) from alignment at ch7:2874303..2876906+

>KJC3_010269-T1 ID=KJC3_010269-T1|Name=KJC3_010269-T1|organism=Aspergillus niger KJC3|type=CDS|length=2133bp|location=Sequence derived from alignment at ch7:2874303..2876906+ (Aspergillus niger KJC3)
ATGGTCGTCCTTGCCACCGCCTCCCGCACCGCAACGATCGCACCCAGGCC
GACGACTAATCCATCCAAGATGCTAGTTACATCATCACCTGTGTCCATCC
TCAAAACGCCTAAGAGCACCCCATCCACGACTGGGATTAAGCACAGGATG
ATGATGGGAGACGACTACAGCGATCTCTCCCTGTCCCCGTCGTCCTCGTC
CGACGCGGAACACAGCCCGAGTCCCCGGAAGCGGACGCGAGTGAAGTTTG
ATAAGGAGGTGTTCATGGTACCATATAAAGAGGAACCTGAGCCGGAACGG
AAACCAGAGAAGAGCGCAGCCGTCGTCCGCGAGGAGGTGCGCAGGGCCAT
CCAACGGCATGTCTCTGGCACCGACAGCGAGGCGTACGACCGCATCAAGG
AGACTTTTGCGGTGGACCCGCGGCGCCGGGATGAGGACAACATGTTTGCC
TACGATGTACCTACACATACGTCCTTGAGACATCATCTCCTGGGTCTTTT
GTCAAATGTTGCGTCCTTGGATCGCACTTGCAACGGACTGGTCCAAGCTG
TGCTGAATAGCGTATGGCTGGGCCGGGATGAGTCGTACATCAAGTTGTAT
ATACGCTTTCTCGGTAACCTTGCCGCTGCCCAGGGCAGCTATCTGGGGGC
TGTGCTCAAAATGCTGGTCAACTATCTGGGAGAGCTTCCCAAGGACACGG
GGAAGATCCCGGGTTACCCGTCTGTTCATGTGCCGGTGCTCTACTCCCGC
GTGCACTTGGCTTTGCGCCATGTCATGCAGTTGATTCCGTCTGGTAGTGG
AACGCTGTCGCCTCTTTTGTCTGCACAGTTTCCTTTTGCTTCCGATTCGG
CCAAGGCCAACATTGCGTATACGCGGAATCTCATCCGGGTGATCAGCTAT
GCCCCGGAGCTTCAGGGTGATATTCTTTCCCTGATAACGGAAAAGCTAGT
CAAGATTGACGTCCACATCCAAGTGGATCTAGAGGACATCGAGGATGAAG
TCGGTGAGGATGTCCTGCAGGGAGTCTCTCCGGAATCAGTCATGATCGAG
GAAGATGATGCGGATGACGACGATGACAACGACTCCGTTCTTAGCGATGA
TTCGGTAGACGATGAATCCAAGCGGATCAAGGCCATTCGGGACAACATCC
TCAAGCTGGATGGCATGATTGACACCATGTTCGAATATTATGCCCCTCCG
TTCACGCTGGGCTCCCTGGACGACAAGGAAAATGCCTTCGATCTTCTGAT
GAGCCATTTCCAGAACATTATTCTCCCCACGTACCGCTCGCGCCACTCTC
AATTCCTTCTCTTCCACTTCTCTCAGTCATCCCCAATTCTTGTGGACCGC
TTCGCCGCGATGTGCACCGAGCTTATCTTTAACAAGACGCAGCCAGCCAT
TATGCGCCAATCAGCTGCTGCTTACCTCGCCAGCTTCGTTGCTCGCGGGG
CCCATATTTCTGGCGAGGTTGTCCGGGATGTGTTCGATCTGTTGGGCACG
TATCTGAACAGTCTTCGTCTGGATTATGAAGCCACTTGCCGGGGCCCCGA
CCTCCGCCGCTATGGCCCCTTCTACTCGACGGCTCAGGCCCTGCTCTACA
TCTTCTGCTTTCGCTGGCGAGACCTGACCACCGCTGCGCTGGAGGGCGAC
ACTCCGGACCAAGTGGACGAGCTTGAGCCAGAAGACATCATGTTCCCGCC
GTCAGTCAAGGAAGTGCTGCACCAAGCCATCCACTCCAAGCTGAACCCGC
TGAAGGTGTGCTCGCCCGCGATCGTGTCCCAGTTCGCGCGGATGTCGCAG
CACTTCAACTTGATGTACGTGTTCAGCATCCTCGAAACAAACAAGCGACT
ACGCGTATCCTCATACCGCAGCATCGGCGCCATGGCCGATCCTCGCTTCA
GCCAAGTCGAGCGGGAGATCCGCGCCGGCGACGACCTTGGCTACCAACTA
GACGCCTACTTCCCCTTTGACCCCTACCAGCTCCCGCGCAGCCGACGCTG
GGTGGAAAACGACTACGTCCACTGGCGCGGCATCCCAGGTCTAGACGAAG
ACGACGACTCGGACAGCGAAGCGGACGACAACGAGTCGGACGAAGACCTC
AGCGATGGGACCGAAACGGATGACGAATTGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010269KJC3_010269Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010269-T1KJC3_010269-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010269-T1.utr5p1KJC3_010269-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_010269-T1.utr5p2KJC3_010269-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010269-T1.exon1KJC3_010269-T1.exon1Aspergillus niger KJC3exon
KJC3_010269-T1.exon2KJC3_010269-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010269-T1.cdsKJC3_010269-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010269-T1.utr3p1KJC3_010269-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261660
DBxrefInterPro:IPR007991
DBxrefPFAM:PF05327
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2874303..2876906 +
Powered by Drupal