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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2899760..2901639- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010277-T1 ID=KJC3_010277-T1|Name=KJC3_010277-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1880bp|location=Sequence derived from alignment at ch7:2899760..2901639- (Aspergillus niger KJC3)
TCAAAAGTTGCGTTTACCATTATCCTTTTCTACGCCTCTCCGACTTTTTC
GGAATATTCAGGGAAGCTATAGATCTTCAAGTGTCTTACCATTCACATCT
ATGCTTCCATCAGACATCAGCCGATCGCTCAGTAAGCAATGGCCTTGTCG
AGAGCTCCAGACCAGACAGCTTGCCAGTCTTCTCGGCGTATGTTTTCTCC
CCCAGATCCTCCGAATTCCTTTCAATAACCCCGAATAAATAATTAACATA
TAAACGCGACCGACTAGCCTAGAATTTCCAGCCCATCCACATTAGTTGTA
CACGGAATATCCGCAACTTGCAAAACGACTATCGTCCGCAATGTCCTCGC
TGCCCTCGAAGTCCCACATGCTATTGTCCGGAGTCCGGAATGCATCACCG
GCCGTCATCTCCTAACGAAGATCCTCTGGGCAACGCTTGAAGCGCTTGGG
AAACGCGACGAATGGGAGAAATACGGCAAGGGAAGGTGCGAGCATGTTAG
CTCCCTGGCTGTGCTGCTGGGCGAATGTCTTGCCTCATTATCGGACGGCA
GCAGTAATGACAAGGGCAAGTTCGTGCTGGTTTTGGATGGGATAGATAAG
CAGCGTGAAGCACCGCATACTCTGTTGTCTGCGCTGGCGAGGCTGGGAGA
AGTGGTATGTTTTTGCCCCGTTCGTTTTCTTGGTGAGAGCCCTTGCTAAT
GGGTTGATTGTTTACTGCGCAGATTCCATCCCTATGTGTCGTCCTTATCC
TCAGCTCCAGTCCGCGGCCGCTGTTTCTTCAAGCTGCGGGCGTTCCGCAT
ATTAGCTTCCCTCCGTATACGCGCAAAGAGGCCGTCACGATTATCTTGAA
CGCTGGACCGCCTGCTGTGAGTGGTCTGGATGACGAGACAGCTTCGAGAT
TATACCCGCATTTTGTGTCCGCTATATATGACTCTCTGGTTGGGCCTACG
GCGAGTTCTATTCCTACGTTCAGATCGATATGCGAGAAGATATGGCCTCA
GTTCGTTGCTCCCATCACCAACGGCGATATCCCGCCTGGGGGAAGCAATG
AATGGGACTTCTCGCGACTTCTGGTCAAAAACCGTGCTTTATTCCGCCAT
CAAGGCGAAGGCGCTCTTGTACATCACATTGTCACCGAAGAATCAGCTCC
CGCAAATGGCTCCCTATCGAAGCCGTCAATGTCGGCCGTCTCGGCCCCTT
CACCCCTTCCTTCTTTACCTTACTTCCCGACCTTGATCTTGACCTCCGCA
TACCTTGCATCACATACACCCCAACGGCTCGATACCATCTTCTTCTCGAA
ATTCTCTTCCTCTTCCTTATCTGCTCGGAATAAACGCGCACATCATCGGC
GACGGTTGAAGGTGCTTTCCCGAGCCCAGGCGGAGGATAGTCGGGAGGCG
AGCCGAGGCCCGTCAACCCCTAGCAAGAAAGGCAAAAGAGAGAAGACTCG
CATCACGAAATCCACTCTGGAGTCTGCCTTTGCTACTTCCTCTGCCACTA
CTTCGGCTGTGGGCAGCAACGCCGGTATCACCGGTCCGTCAACGATCCTA
ACAGCCCGTCCTTTCCCGCTCGAGCGACTGATCGCTATCTACCACGCCAT
TGACCCCAATCCCCCAGCAAACCCCATCCGATTGGCGGCGGTTTCCGATG
CGATATACGCCGAGCTTGCTACATTACGTCGGTTACGACTCGTGGTGCCA
GCGGCAGGTCGCGAGAGCGGCGGTCGCATGGGGCTCGGGTCCGGAGGGTT
AAGTAGCGGTAACACGACCTCGGATGCTGGTGAGAAATGGTGCGTCAATG
TCTCGGGCGACTGGATCGGAGAGTTGGCCAAGACAGTAGGCGTCGAGGTT
GGCGAATGGTTGGCGGGAGGGTTGGATTAA back to topCoding sequence (CDS) from alignment at ch7:2899760..2901639- >KJC3_010277-T1 ID=KJC3_010277-T1|Name=KJC3_010277-T1|organism=Aspergillus niger KJC3|type=CDS|length=4896bp|location=Sequence derived from alignment at ch7:2899760..2901639- (Aspergillus niger KJC3)
ATTCCATCCCTATGTGTCGTCCTTATCCTCAGCTCCAGTCCGCGGCCGCT
GTTTCTTCAAGCTGCGGGCGTTCCGCATATTAGCTTCCCTCCGTATACGC
GCAAAGAGGCCGTCACGATTATCTTGAACGCTGGACCGCCTGCTGTGAGT
GGTCTGGATGACGAGACAGCTTCGAGATTATACCCGCATTTTGTGTCCGC
TATATATGACTCTCTGGTTGGGCCTACGGCGAGTTCTATTCCTACGTTCA
GATCGATATGCGAGAAGATATGGCCTCAGTTCGTTGCTCCCATCACCAAC
GGCGATATCCCGCCTGGGGGAAGCAATGAATGGGACTTCTCGCGACTTCT
GGTCAAAAACCGTGCTTTATTCCGCCATCAAGGCGAAGGCGCTCTTGTAC
ATCACATTGTCACCGAAGAATCAGCTCCCGCAAATGGCTCCCTATCGAAG
CCGTCAATGTCGGCCGTCTCGGCCCCTTCACCCCTTCCTTCTTTACCTTA
CTTCCCGACCTTGATCTTGACCTCCGCATACCTTGCATCACATACACCCC
AACGGCTCGATACCATCTTCTTCTCGAAATTCTCTTCCTCTTCCTTATCT
GCTCGGAATAAACGCGCACATCATCGGCGACGGTTGAAGGTGCTTTCCCG
AGCCCAGGCGGAGGATAGTCGGGAGGCGAGCCGAGGCCCGTCAACCCCTA
GCAAGAAAGGCAAAAGAGAGAAGACTCGCATCACGAAATCCACTCTGGAG
TCTGCCTTTGCTACTTCCTCTGCCACTACTTCGGCTGTGGGCAGCAACGC
CGGTATCACCGGTCCGTCAACGATCCTAACAGCCCGTCCTTTCCCGCTCG
AGCGACTGATCGCTATCTACCACGCCATTGACCCCAATCCCCCAGCAAAC
CCCATCCGATTGGCGGCGGTTTCCGATGCGATATACGCCGAGCTTGCTAC
ATTACGTCGGTTACGACTCGTGGTGCCAGCGGCAGGTCGCGAGAGCGGCG
GTCGCATGGGGCTCGGGTCCGGAGGGTTAAGTAGCGGTAACACGACCTCG
GATGCTGGTGAGAAATGGTGCGTCAATGTCTCGGGCGACTGGATCGGAGA
GTTGGCCAAGACAGTAGGCGTCGAGGTTGGCGAATGGTTGGCGGGAGGGT
TGGATTAACCTAGAATTTCCAGCCCATCCACATTAGTTGTACACGGAATA
TCCGCAACTTGCAAAACGACTATCGTCCGCAATGTCCTCGCTGCCCTCGA
AGTCCCACATGCTATTGTCCGGAGTCCGGAATGCATCACCGGCCGTCATC
TCCTAACGAAGATCCTCTGGGCAACGCTTGAAGCGCTTGGGAAACGCGAC
GAATGGGAGAAATACGGCAAGGGAAGGTGCGAGCATGTTAGCTCCCTGGC
TGTGCTGCTGGGCGAATGTCTTGCCTCATTATCGGACGGCAGCAGTAATG
ACAAGGGCAAGTTCGTGCTGGTTTTGGATGGGATAGATAAGCAGCGTGAA
GCACCGCATACTCTGTTGTCTGCGCTGGCGAGGCTGGGAGAAGTGATGCT
TCCATCAGACATCAGCCGATCGCTCAGTAAGCAATGGCCTTGTCGAGAGC
TCCAGACCAGACAGCTTGCCAGTCTTCTCGGCATTCCATCCCTATGTGTC
GTCCTTATCCTCAGCTCCAGTCCGCGGCCGCTGTTTCTTCAAGCTGCGGG
CGTTCCGCATATTAGCTTCCCTCCGTATACGCGCAAAGAGGCCGTCACGA
TTATCTTGAACGCTGGACCGCCTGCTGTGAGTGGTCTGGATGACGAGACA
GCTTCGAGATTATACCCGCATTTTGTGTCCGCTATATATGACTCTCTGGT
TGGGCCTACGGCGAGTTCTATTCCTACGTTCAGATCGATATGCGAGAAGA
TATGGCCTCAGTTCGTTGCTCCCATCACCAACGGCGATATCCCGCCTGGG
GGAAGCAATGAATGGGACTTCTCGCGACTTCTGGTCAAAAACCGTGCTTT
ATTCCGCCATCAAGGCGAAGGCGCTCTTGTACATCACATTGTCACCGAAG
AATCAGCTCCCGCAAATGGCTCCCTATCGAAGCCGTCAATGTCGGCCGTC
TCGGCCCCTTCACCCCTTCCTTCTTTACCTTACTTCCCGACCTTGATCTT
GACCTCCGCATACCTTGCATCACATACACCCCAACGGCTCGATACCATCT
TCTTCTCGAAATTCTCTTCCTCTTCCTTATCTGCTCGGAATAAACGCGCA
CATCATCGGCGACGGTTGAAGGTGCTTTCCCGAGCCCAGGCGGAGGATAG
TCGGGAGGCGAGCCGAGGCCCGTCAACCCCTAGCAAGAAAGGCAAAAGAG
AGAAGACTCGCATCACGAAATCCACTCTGGAGTCTGCCTTTGCTACTTCC
TCTGCCACTACTTCGGCTGTGGGCAGCAACGCCGGTATCACCGGTCCGTC
AACGATCCTAACAGCCCGTCCTTTCCCGCTCGAGCGACTGATCGCTATCT
ACCACGCCATTGACCCCAATCCCCCAGCAAACCCCATCCGATTGGCGGCG
GTTTCCGATGCGATATACGCCGAGCTTGCTACATTACGTCGGTTACGACT
CGTGGTGCCAGCGGCAGGTCGCGAGAGCGGCGGTCGCATGGGGCTCGGGT
CCGGAGGGTTAAGTAGCGGTAACACGACCTCGGATGCTGGTGAGAAATGG
TGCGTCAATGTCTCGGGCGACTGGATCGGAGAGTTGGCCAAGACAGTAGG
CGTCGAGGTTGGCGAATGGTTGGCGGGAGGGTTGGATTAACCTAGAATTT
CCAGCCCATCCACATTAGTTGTACACGGAATATCCGCAACTTGCAAAACG
ACTATCGTCCGCAATGTCCTCGCTGCCCTCGAAGTCCCACATGCTATTGT
CCGGAGTCCGGAATGCATCACCGGCCGTCATCTCCTAACGAAGATCCTCT
GGGCAACGCTTGAAGCGCTTGGGAAACGCGACGAATGGGAGAAATACGGC
AAGGGAAGGTGCGAGCATGTTAGCTCCCTGGCTGTGCTGCTGGGCGAATG
TCTTGCCTCATTATCGGACGGCAGCAGTAATGACAAGGGCAAGTTCGTGC
TGGTTTTGGATGGGATAGATAAGCAGCGTGAAGCACCGCATACTCTGTTG
TCTGCGCTGGCGAGGCTGGGAGAAGTGATGCTTCCATCAGACATCAGCCG
ATCGCTCAGTAAGCAATGGCCTTGTCGAGAGCTCCAGACCAGACAGCTTG
CCAGTCTTCTCGGCATTCCATCCCTATGTGTCGTCCTTATCCTCAGCTCC
AGTCCGCGGCCGCTGTTTCTTCAAGCTGCGGGCGTTCCGCATATTAGCTT
CCCTCCGTATACGCGCAAAGAGGCCGTCACGATTATCTTGAACGCTGGAC
CGCCTGCTGTGAGTGGTCTGGATGACGAGACAGCTTCGAGATTATACCCG
CATTTTGTGTCCGCTATATATGACTCTCTGGTTGGGCCTACGGCGAGTTC
TATTCCTACGTTCAGATCGATATGCGAGAAGATATGGCCTCAGTTCGTTG
CTCCCATCACCAACGGCGATATCCCGCCTGGGGGAAGCAATGAATGGGAC
TTCTCGCGACTTCTGGTCAAAAACCGTGCTTTATTCCGCCATCAAGGCGA
AGGCGCTCTTGTACATCACATTGTCACCGAAGAATCAGCTCCCGCAAATG
GCTCCCTATCGAAGCCGTCAATGTCGGCCGTCTCGGCCCCTTCACCCCTT
CCTTCTTTACCTTACTTCCCGACCTTGATCTTGACCTCCGCATACCTTGC
ATCACATACACCCCAACGGCTCGATACCATCTTCTTCTCGAAATTCTCTT
CCTCTTCCTTATCTGCTCGGAATAAACGCGCACATCATCGGCGACGGTTG
AAGGTGCTTTCCCGAGCCCAGGCGGAGGATAGTCGGGAGGCGAGCCGAGG
CCCGTCAACCCCTAGCAAGAAAGGCAAAAGAGAGAAGACTCGCATCACGA
AATCCACTCTGGAGTCTGCCTTTGCTACTTCCTCTGCCACTACTTCGGCT
GTGGGCAGCAACGCCGGTATCACCGGTCCGTCAACGATCCTAACAGCCCG
TCCTTTCCCGCTCGAGCGACTGATCGCTATCTACCACGCCATTGACCCCA
ATCCCCCAGCAAACCCCATCCGATTGGCGGCGGTTTCCGATGCGATATAC
GCCGAGCTTGCTACATTACGTCGGTTACGACTCGTGGTGCCAGCGGCAGG
TCGCGAGAGCGGCGGTCGCATGGGGCTCGGGTCCGGAGGGTTAAGTAGCG
GTAACACGACCTCGGATGCTGGTGAGAAATGGTGCGTCAATGTCTCGGGC
GACTGGATCGGAGAGTTGGCCAAGACAGTAGGCGTCGAGGTTGGCGAATG
GTTGGCGGGAGGGTTGGATTAACCTAGAATTTCCAGCCCATCCACATTAG
TTGTACACGGAATATCCGCAACTTGCAAAACGACTATCGTCCGCAATGTC
CTCGCTGCCCTCGAAGTCCCACATGCTATTGTCCGGAGTCCGGAATGCAT
CACCGGCCGTCATCTCCTAACGAAGATCCTCTGGGCAACGCTTGAAGCGC
TTGGGAAACGCGACGAATGGGAGAAATACGGCAAGGGAAGGTGCGAGCAT
GTTAGCTCCCTGGCTGTGCTGCTGGGCGAATGTCTTGCCTCATTATCGGA
CGGCAGCAGTAATGACAAGGGCAAGTTCGTGCTGGTTTTGGATGGGATAG
ATAAGCAGCGTGAAGCACCGCATACTCTGTTGTCTGCGCTGGCGAGGCTG
GGAGAAGTGATGCTTCCATCAGACATCAGCCGATCGCTCAGTAAGCAATG
GCCTTGTCGAGAGCTCCAGACCAGACAGCTTGCCAGTCTTCTCGGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000808 | origin recognition complex |
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010277-T1.utr5p1 | KJC3_010277-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR020796 |
| DBxref | InterPro:IPR041664 |
| DBxref | PFAM:PF14630 |
| DBxref | PFAM:PF13191 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2899760..2901639 - |
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