You are here

Home

KJC3_010288-T1, KJC3_010288-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010288-T1
Unique NameKJC3_010288-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2933849..2935988+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010288-T1 ID=KJC3_010288-T1|Name=KJC3_010288-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2140bp|location=Sequence derived from alignment at ch7:2933849..2935988+ (Aspergillus niger KJC3)
TGAGCTTCCCGGCCGGCCACCAGAACTGCACCCCGCGACGATATCGGGGT
AGAAATATCCCGTGGACTGTACTTCAAAAGAGAGTTCGCCTCAATTGATT
CCTGCTCGCTGTCTTGCATCTTTGTTGTTCATCAATTCCTTCTTCCCCCT
CACAATAACTCATCATGTCTAAGGTCGCATCTACCTTCTCGCGTATGTGG
ACACGATCTTGCTACTGCAGCTGTGTTGCTAACGCAAATCAGGCCTCGTG
CGCTTCGTTCCCAAGTCGAACCCTGCTAAGGTTCTGATCGGTGAGCCCGT
CGATGCCGCAGTGGATGTTGGATTGGCCGTCTACCAGGGCAAGGATGTCG
CTGTGCGCCCCTTCTCCGGTAGCTCCGTCCTCAACCCCGGCCAGAAGACC
GACACGACCGAGACCATTGAGCGCGTGCTTTCGCCTTTGGCACAGAGCGA
AGTCGGATCCATCCGATGCATTGGACTGAACGTAAGTTCTCATTCATCGC
AGCATAGTCGCCTTTCGGTATCGAGCAAGAAACTAAGCGATTGCGCAGTA
TGTCTCCCACGCTGCTGAGATGAAGCTGTCCATCCCCGATGTTCCTACTC
TTTTCATGAAGCCCTCGACTGCTCTGTCCGACCCCTGGCCCGCCCCGACC
GTTCTGCCCAAGCTCACCCAGATCGACAACACGGGTGACTACGAGTCGGA
GATGGTCATTGTGATCGGTCGCGATGCGAAGGATGTCAGCGAGGCTGAGG
CCCTGGACTACGTGCTCGGATACACCGCGGCCAACGATATCTCTAGCCGC
ACCTACCAGATGAACCAGAGCCAATGGTGCTTCTCCAAGGGCTTCGACAC
CTCCTGCCCAATCGGTATAGCTAGCCCACCTTCAATACTAAGGTGATATT
GCATTTTGTGCTGATGGACGAACTCTCGCAGGTCCCGTCCTCGTTTCCGC
CGCTCAGGTCCCCGATGCCAGCAAGTTCCACATTCGTGGATCGAAGAACG
GAAAGGTCCTTCAGGACTGCCCCTTGACGTATGTCTCTTCTTATACTGCC
CATGATGCGCACCAGGATAAAAGCTGACCAGCAATTCCGAACAGTGATCT
GATCTTCAACGTGCCCCAGCTCGTCAGCTTCCTGTCCCAGGGCACCACCC
TGCCTGCGGGTACTATCATCCTCACCGGTACTCCCCCCGGTGTTGGCGCC
GCCAAGAACCCCAAGGAGTTCTTCAAGCATGGCGACGAGTTCGCCGTCGA
GCTGCAGCCCCACGTCGGCACCCTCATCACGAAGATTGAAAACCAGGCAT
AAATATGATAATGGTACAATGAGACGGGTGGGGATTTACGGATTATGATG
AGCCATATTACAAGAATAGCATAGAGATGTATATACTGTACGGATACCAA
TGAACAGGTTCATTGTTCCAATACATACATGCGTGAATATAGTTAAGCCA
GGTGACATGTCCTATGATGCAAGGAGTTATCACATTGTCGCAATCATCCT
CCGAGAATGACAACAAACCCAACAAGACGTAGGTGGGAGGCAAACCACCC
ACATCCACACCCCACGCTGACTAAGGTCCCCACAATCAGCCACTTCTCAA
GCTTTTGCCCAGCACTGCCCATGAATTCTAGTCTAGCTGCTGCAGGCCGG
AAGACAAGAAGCAAGGAGAAGGAGGCAGCTGACAAGGAGGAAAAGAAATA
AGCCTGAATCCAACATACCAAGGTTCAAGTTAAACCTCAGGCACTAAATA
CTGAATCCTTAAAGACCCAGAAACCGCCATGGAAGCAACAACAAAAATCC
GTATAATCGAAGTAGTCTTCTTCCCCGTGTAACTCCTTACCCATCCCTTC
ACTACCATCACTCCATAGATGGATAAACGAAACTCGTCCTCAAAATGCAA
AGCTACTCACAGACCGAACCACGAATTGCCGACTCACATCACAAAATCAG
TCAACATCTGCAGGAGAGGATAAAATCTTATCCTAGCGGAGTAAATCTAT
TCCGCTTCGATGCCGAGCGCTGCGTGACCAGTCCGAACCGGAGTTTAGTG
GTTCAACTTTCGGGAGTAACCTTGCATGCTGGCCAGCCAGTAGTCAATAC
CTGAGAAGCCAAGTAATCGGGCCATGTGCTGAGTTATCCC
back to top

Coding sequence (CDS) from alignment at ch7:2933849..2935988+

>KJC3_010288-T1 ID=KJC3_010288-T1|Name=KJC3_010288-T1|organism=Aspergillus niger KJC3|type=CDS|length=4440bp|location=Sequence derived from alignment at ch7:2933849..2935988+ (Aspergillus niger KJC3)
ATGTCTAAGGTCGCATCTACCTTCTCGCGCCTCGTGCGCTTCGTTCCCAA
GTCGAACCCTGCTAAGGTTCTGATCGGTGAGCCCGTCGATGCCGCAGTGG
ATGTTGGATTGGCCGTCTACCAGGGCAAGGATGTCGCTGTGCGCCCCTTC
TCCGGTAGCTCCGTCCTCAACCCCGGCCAGAAGACCGACACGACCGAGAC
CATTGAGCGCGTGCTTTCGCCTTTGGCACAGAGCGAAGTCGGATCCATCC
GATGCATTGGACTGAACTATGTCTCCCACGCTGCTGAGATGAAGCTGTCC
ATCCCCGATGTTCCTACTCTTTTCATGAAGCCCTCGACTGCTCTGTCCGA
CCCCTGGCCCGCCCCGACCGTTCTGCCCAAGCTCACCCAGATCGACAACA
CGGGTGACTACGAGTCGGAGATGGTCATTGTGATCGGTCGCGATGCGAAG
GATGTCAGCGAGGCTGAGGCCCTGGACTACGTGCTCGGATACACCGCGGC
CAACGATATCTCTAGCCGCACCTACCAGATGAACCAGAGCCAATGGTGCT
TCTCCAAGGGCTTCGACACCTCCTGCCCAATCGGTCCCGTCCTCGTTTCC
GCCGCTCAGGTCCCCGATGCCAGCAAGTTCCACATTCGTGGATCGAAGAA
CGGAAAGGTCCTTCAGGACTGCCCCTTGACTGATCTGATCTTCAACGTGC
CCCAGCTCGTCAGCTTCCTGTCCCAGGGCACCACCCTGCCTGCGGGTACT
ATCATCCTCACCGGTACTCCCCCCGGTGTTGGCGCCGCCAAGAACCCCAA
GGAGTTCTTCAAGCATGGCGACGAGTTCGCCGTCGAGCTGCAGCCCCACG
TCGGCACCCTCATCACGAAGATTGAAAACCAGGCATAAATGTCTAAGGTC
GCATCTACCTTCTCGCGCCTCGTGCGCTTCGTTCCCAAGTCGAACCCTGC
TAAGGTTCTGATCGGTGAGCCCGTCGATGCCGCAGTGGATGTTGGATTGG
CCGTCTACCAGGGCAAGGATGTCGCTGTGCGCCCCTTCTCCGGTAGCTCC
GTCCTCAACCCCGGCCAGAAGACCGACACGACCGAGACCATTGAGCGCGT
GCTTTCGCCTTTGGCACAGAGCGAAGTCGGATCCATCCGATGCATTGGAC
TGAACTATGTCTCCCACGCTGCTGAGATGAAGCTGTCCATCCCCGATGTT
CCTACTCTTTTCATGAAGCCCTCGACTGCTCTGTCCGACCCCTGGCCCGC
CCCGACCGTTCTGCCCAAGCTCACCCAGATCGACAACACGGGTGACTACG
AGTCGGAGATGGTCATTGTGATCGGTCGCGATGCGAAGGATGTCAGCGAG
GCTGAGGCCCTGGACTACGTGCTCGGATACACCGCGGCCAACGATATCTC
TAGCCGCACCTACCAGATGAACCAGAGCCAATGGTGCTTCTCCAAGGGCT
TCGACACCTCCTGCCCAATCGGTCCCGTCCTCGTTTCCGCCGCTCAGGTC
CCCGATGCCAGCAAGTTCCACATTCGTGGATCGAAGAACGGAAAGGTCCT
TCAGGACTGCCCCTTGACTGATCTGATCTTCAACGTGCCCCAGCTCGTCA
GCTTCCTGTCCCAGGGCACCACCCTGCCTGCGGGTACTATCATCCTCACC
GGTACTCCCCCCGGTGTTGGCGCCGCCAAGAACCCCAAGGAGTTCTTCAA
GCATGGCGACGAGTTCGCCGTCGAGCTGCAGCCCCACGTCGGCACCCTCA
TCACGAAGATTGAAAACCAGGCATAAATGTCTAAGGTCGCATCTACCTTC
TCGCGCCTCGTGCGCTTCGTTCCCAAGTCGAACCCTGCTAAGGTTCTGAT
CGGTGAGCCCGTCGATGCCGCAGTGGATGTTGGATTGGCCGTCTACCAGG
GCAAGGATGTCGCTGTGCGCCCCTTCTCCGGTAGCTCCGTCCTCAACCCC
GGCCAGAAGACCGACACGACCGAGACCATTGAGCGCGTGCTTTCGCCTTT
GGCACAGAGCGAAGTCGGATCCATCCGATGCATTGGACTGAACTATGTCT
CCCACGCTGCTGAGATGAAGCTGTCCATCCCCGATGTTCCTACTCTTTTC
ATGAAGCCCTCGACTGCTCTGTCCGACCCCTGGCCCGCCCCGACCGTTCT
GCCCAAGCTCACCCAGATCGACAACACGGGTGACTACGAGTCGGAGATGG
TCATTGTGATCGGTCGCGATGCGAAGGATGTCAGCGAGGCTGAGGCCCTG
GACTACGTGCTCGGATACACCGCGGCCAACGATATCTCTAGCCGCACCTA
CCAGATGAACCAGAGCCAATGGTGCTTCTCCAAGGGCTTCGACACCTCCT
GCCCAATCGGTCCCGTCCTCGTTTCCGCCGCTCAGGTCCCCGATGCCAGC
AAGTTCCACATTCGTGGATCGAAGAACGGAAAGGTCCTTCAGGACTGCCC
CTTGACTGATCTGATCTTCAACGTGCCCCAGCTCGTCAGCTTCCTGTCCC
AGGGCACCACCCTGCCTGCGGGTACTATCATCCTCACCGGTACTCCCCCC
GGTGTTGGCGCCGCCAAGAACCCCAAGGAGTTCTTCAAGCATGGCGACGA
GTTCGCCGTCGAGCTGCAGCCCCACGTCGGCACCCTCATCACGAAGATTG
AAAACCAGGCATAAATGTCTAAGGTCGCATCTACCTTCTCGCGCCTCGTG
CGCTTCGTTCCCAAGTCGAACCCTGCTAAGGTTCTGATCGGTGAGCCCGT
CGATGCCGCAGTGGATGTTGGATTGGCCGTCTACCAGGGCAAGGATGTCG
CTGTGCGCCCCTTCTCCGGTAGCTCCGTCCTCAACCCCGGCCAGAAGACC
GACACGACCGAGACCATTGAGCGCGTGCTTTCGCCTTTGGCACAGAGCGA
AGTCGGATCCATCCGATGCATTGGACTGAACTATGTCTCCCACGCTGCTG
AGATGAAGCTGTCCATCCCCGATGTTCCTACTCTTTTCATGAAGCCCTCG
ACTGCTCTGTCCGACCCCTGGCCCGCCCCGACCGTTCTGCCCAAGCTCAC
CCAGATCGACAACACGGGTGACTACGAGTCGGAGATGGTCATTGTGATCG
GTCGCGATGCGAAGGATGTCAGCGAGGCTGAGGCCCTGGACTACGTGCTC
GGATACACCGCGGCCAACGATATCTCTAGCCGCACCTACCAGATGAACCA
GAGCCAATGGTGCTTCTCCAAGGGCTTCGACACCTCCTGCCCAATCGGTC
CCGTCCTCGTTTCCGCCGCTCAGGTCCCCGATGCCAGCAAGTTCCACATT
CGTGGATCGAAGAACGGAAAGGTCCTTCAGGACTGCCCCTTGACTGATCT
GATCTTCAACGTGCCCCAGCTCGTCAGCTTCCTGTCCCAGGGCACCACCC
TGCCTGCGGGTACTATCATCCTCACCGGTACTCCCCCCGGTGTTGGCGCC
GCCAAGAACCCCAAGGAGTTCTTCAAGCATGGCGACGAGTTCGCCGTCGA
GCTGCAGCCCCACGTCGGCACCCTCATCACGAAGATTGAAAACCAGGCAT
AAATGTCTAAGGTCGCATCTACCTTCTCGCGCCTCGTGCGCTTCGTTCCC
AAGTCGAACCCTGCTAAGGTTCTGATCGGTGAGCCCGTCGATGCCGCAGT
GGATGTTGGATTGGCCGTCTACCAGGGCAAGGATGTCGCTGTGCGCCCCT
TCTCCGGTAGCTCCGTCCTCAACCCCGGCCAGAAGACCGACACGACCGAG
ACCATTGAGCGCGTGCTTTCGCCTTTGGCACAGAGCGAAGTCGGATCCAT
CCGATGCATTGGACTGAACTATGTCTCCCACGCTGCTGAGATGAAGCTGT
CCATCCCCGATGTTCCTACTCTTTTCATGAAGCCCTCGACTGCTCTGTCC
GACCCCTGGCCCGCCCCGACCGTTCTGCCCAAGCTCACCCAGATCGACAA
CACGGGTGACTACGAGTCGGAGATGGTCATTGTGATCGGTCGCGATGCGA
AGGATGTCAGCGAGGCTGAGGCCCTGGACTACGTGCTCGGATACACCGCG
GCCAACGATATCTCTAGCCGCACCTACCAGATGAACCAGAGCCAATGGTG
CTTCTCCAAGGGCTTCGACACCTCCTGCCCAATCGGTCCCGTCCTCGTTT
CCGCCGCTCAGGTCCCCGATGCCAGCAAGTTCCACATTCGTGGATCGAAG
AACGGAAAGGTCCTTCAGGACTGCCCCTTGACTGATCTGATCTTCAACGT
GCCCCAGCTCGTCAGCTTCCTGTCCCAGGGCACCACCCTGCCTGCGGGTA
CTATCATCCTCACCGGTACTCCCCCCGGTGTTGGCGCCGCCAAGAACCCC
AAGGAGTTCTTCAAGCATGGCGACGAGTTCGCCGTCGAGCTGCAGCCCCA
CGTCGGCACCCTCATCACGAAGATTGAAAACCAGGCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010288KJC3_010288Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010288-T1KJC3_010288-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010288-T1.utr5p1KJC3_010288-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010288-T1.exon1KJC3_010288-T1.exon1Aspergillus niger KJC3exon
KJC3_010288-T1.exon2KJC3_010288-T1.exon2Aspergillus niger KJC3exon
KJC3_010288-T1.exon3KJC3_010288-T1.exon3Aspergillus niger KJC3exon
KJC3_010288-T1.exon4KJC3_010288-T1.exon4Aspergillus niger KJC3exon
KJC3_010288-T1.exon5KJC3_010288-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010288-T1.cdsKJC3_010288-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010288-T1.utr3p1KJC3_010288-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036663
DBxrefInterPro:IPR011234
DBxrefPFAM:PF01557
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2933849..2935988 +
Powered by Drupal