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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2948062..2949955+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010292-T2 ID=KJC3_010292-T2|Name=KJC3_010292-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1894bp|location=Sequence derived from alignment at ch7:2948062..2949955+ (Aspergillus niger KJC3) CCTCTCCTCCTTCACCTTTCACACTTTCCCATCTGCTGTACACTTTAACC
TCGGCTTGTCTCACTCTCTAACCAACTACATAGTGTCTCTCCACACTGAT
GTCCCTCGGAAGAGTTACCCGCCCGTTCCCGCTCGACGGATCCGTTCAGC
CGACGCGCTCCCCCATGCATTCTTTCCACTCATCGTGTTGGGAGCTATGA
GCTATGAGCTATGCTAGGCTGCCCTGGATTGCTTCGGCTTCGGCGGGCAG
ATCCTTTTTTCGCTACCCTCTTGCTATGGACAAACTAGTGCTTAGTGCCC
GGGAAATTAATTATTGAGGTTCAGACTTCAGCCGATGATCTTCGTTAGTG
CGTTGCGCGAACCCATGGCTGCCTCTCCGCCATGGGCCGTGATTTGTCAA
ATCCGCGTGCGTTTAAGGTGGTACATCTGGGACATGTGAACCTACCGTGA
GTGCTTCGTCCATGTCATTCGGCCCTGTGGGGTAATCCAGACTCTTCTGA
TCCCTTACGTGGAACAACGTTCAGGTCAAAAAGGGTCTCCCACCCCTCGT
GCCTGTCCTCGCAAGCCAAGCATTGAAATTCTCCCCAAATCCCCTATCCC
CTTTATCACTCTCCGACCAAACAATCCCTCTCTCTCTCTCCACATATATA
CTACTTGACGGCTATACGTGCACCCGAGCAAGGATGTCATCACGAGCCCG
ACCCAACCTGCTGGATGTGGTCTCCTCTTTGTCCTCCGTCCCGGGGACAC
GGAACCAATATGCCGTGAAGATTACACGGGACTGGTGTACCCAACAGTAT
GTCTGTTTGACCGCCGCATCCTTGCTTCATCACTCGACGGGTTGAGTTGA
CCAGAGCAGCTCTGTCCTTGGGGGTTTTTCCACTGCGCTTATGCTGGCCG
CCGGTCAAAGGTTCCTTGACCAGGAACTTGGCGTAGGCCGGTATCCTGAC
CCCGTTCATGCGTTCGTCCAGTTTCTACACATGGTTCACCCTGGCCCGTC
AATTATTACATGCACGCTTCTACGAGTGTCCAAGAAACAATCCGTCCTAC
AAGTTGAACTAGCGCGTGCCTCTAAGCCGGGAGAGGACTCAGACTCCTAT
CCAACTACTACTCTCGGTATCTTCACATACGGCGATATTAGCAAAGAAAA
TGGCCTGTCACAGGAAACGCGGCCGGTCATCACTCGGCCACCCCCCGACC
GGCTCACTGAATGCGTTACTATCGACGACCCCGTCGTCAGCTCAACTCCT
GTGACCGCGAAGATGAACTGGGTCGCCCCACGATCTCCACAGGGACTCTG
GGGCCACCGCCTCGGCGGCCACAACCGCGAGGTCTGGCTGTCCTTCCGCG
ACGGCTCCAAACTATCTGACGTGTTACATCTGGCGTATCTTTCAGACCTG
GTAAGTCGCGGTTCTTCCCAACTTACTTCTGCTTGTGCTAATACGCCGCG
TGCGGTAAGCCCCTGCAGCCACCAGCGACCCATATTCCGGATTTCTACGC
TAAATATGCGATCTCCACCCTGTGTCTGTCGATCGAGTTCAAAAGACGGC
CCGACCCGTCCACCGACTGGGTCATGGTCCGCTCCAACTCCAACAAGGTT
TCCAATGGCCGGTATGATGCTGCTTTGCAACTATTAGATGAGAGGGGCAA
TCTTCTCGCCTTGAGCAATCACGTTGTGTTTACCTCAGACTTGAAGCCCC
GGCCGGCTCGGCTGTAAGTGTGGGGCCGTGGGTCTTTTGATTTCGAGCTT
AGCGTCAAGTCATTTCTCACTGCAGTATGTGATAATAAATTCAAAAGCGA
GGTGTTTTGTTCACGGAGTGAGTGGATAGACATTGATTCTGTAGTTAGTT
AATCCGTATTTGGAGGTGATTAGCATAAAGCGTTGGTTCCTGGC back to topCoding sequence (CDS) from alignment at ch7:2948062..2949955+ >KJC3_010292-T2 ID=KJC3_010292-T2|Name=KJC3_010292-T2|organism=Aspergillus niger KJC3|type=CDS|length=2736bp|location=Sequence derived from alignment at ch7:2948062..2949955+ (Aspergillus niger KJC3) ATGTCATCACGAGCCCGACCCAACCTGCTGGATGTGGTCTCCTCTTTGTC CTCCGTCCCGGGGACACGGAACCAATATGCCGTGAAGATTACACGGGACT GGTGTACCCAACACTCTGTCCTTGGGGGTTTTTCCACTGCGCTTATGCTG GCCGCCGGTCAAAGGTTCCTTGACCAGGAACTTGGCGTAGGCCGGTATCC TGACCCCGTTCATGCGTTCGTCCAGTTTCTACACATGGTTCACCCTGGCC CGTCAATTATTACATGCACGCTTCTACGAGTGTCCAAGAAACAATCCGTC CTACAAGTTGAACTAGCGCGTGCCTCTAAGCCGGGAGAGGACTCAGACTC CTATCCAACTACTACTCTCGGTATCTTCACATACGGCGATATTAGCAAAG AAAATGGCCTGTCACAGGAAACGCGGCCGGTCATCACTCGGCCACCCCCC GACCGGCTCACTGAATGCGTTACTATCGACGACCCCGTCGTCAGCTCAAC TCCTGTGACCGCGAAGATGAACTGGGTCGCCCCACGATCTCCACAGGGAC TCTGGGGCCACCGCCTCGGCGGCCACAACCGCGAGGTCTGGCTGTCCTTC CGCGACGGCTCCAAACTATCTGACGTGTTACATCTGGCGTATCTTTCAGA CCTGCCCCTGCAGCCACCAGCGACCCATATTCCGGATTTCTACGCTAAAT ATGCGATCTCCACCCTGTGTCTGTCGATCGAGTTCAAAAGACGGCCCGAC CCGTCCACCGACTGGGTCATGGTCCGCTCCAACTCCAACAAGGTTTCCAA TGGCCGGTATGATGCTGCTTTGCAACTATTAGATGAGAGGGGCAATCTTC TCGCCTTGAGCAATCACGTTGTGTTTACCTCAGACTTGAAGCCCCGGCCG GCTCGGCTGTAAATGTCATCACGAGCCCGACCCAACCTGCTGGATGTGGT CTCCTCTTTGTCCTCCGTCCCGGGGACACGGAACCAATATGCCGTGAAGA TTACACGGGACTGGTGTACCCAACACTCTGTCCTTGGGGGTTTTTCCACT GCGCTTATGCTGGCCGCCGGTCAAAGGTTCCTTGACCAGGAACTTGGCGT AGGCCGGTATCCTGACCCCGTTCATGCGTTCGTCCAGTTTCTACACATGG TTCACCCTGGCCCGTCAATTATTACATGCACGCTTCTACGAGTGTCCAAG AAACAATCCGTCCTACAAGTTGAACTAGCGCGTGCCTCTAAGCCGGGAGA GGACTCAGACTCCTATCCAACTACTACTCTCGGTATCTTCACATACGGCG ATATTAGCAAAGAAAATGGCCTGTCACAGGAAACGCGGCCGGTCATCACT CGGCCACCCCCCGACCGGCTCACTGAATGCGTTACTATCGACGACCCCGT CGTCAGCTCAACTCCTGTGACCGCGAAGATGAACTGGGTCGCCCCACGAT CTCCACAGGGACTCTGGGGCCACCGCCTCGGCGGCCACAACCGCGAGGTC TGGCTGTCCTTCCGCGACGGCTCCAAACTATCTGACGTGTTACATCTGGC GTATCTTTCAGACCTGCCCCTGCAGCCACCAGCGACCCATATTCCGGATT TCTACGCTAAATATGCGATCTCCACCCTGTGTCTGTCGATCGAGTTCAAA AGACGGCCCGACCCGTCCACCGACTGGGTCATGGTCCGCTCCAACTCCAA CAAGGTTTCCAATGGCCGGTATGATGCTGCTTTGCAACTATTAGATGAGA GGGGCAATCTTCTCGCCTTGAGCAATCACGTTGTGTTTACCTCAGACTTG AAGCCCCGGCCGGCTCGGCTGTAAATGTCATCACGAGCCCGACCCAACCT GCTGGATGTGGTCTCCTCTTTGTCCTCCGTCCCGGGGACACGGAACCAAT ATGCCGTGAAGATTACACGGGACTGGTGTACCCAACACTCTGTCCTTGGG GGTTTTTCCACTGCGCTTATGCTGGCCGCCGGTCAAAGGTTCCTTGACCA GGAACTTGGCGTAGGCCGGTATCCTGACCCCGTTCATGCGTTCGTCCAGT TTCTACACATGGTTCACCCTGGCCCGTCAATTATTACATGCACGCTTCTA CGAGTGTCCAAGAAACAATCCGTCCTACAAGTTGAACTAGCGCGTGCCTC TAAGCCGGGAGAGGACTCAGACTCCTATCCAACTACTACTCTCGGTATCT TCACATACGGCGATATTAGCAAAGAAAATGGCCTGTCACAGGAAACGCGG CCGGTCATCACTCGGCCACCCCCCGACCGGCTCACTGAATGCGTTACTAT CGACGACCCCGTCGTCAGCTCAACTCCTGTGACCGCGAAGATGAACTGGG TCGCCCCACGATCTCCACAGGGACTCTGGGGCCACCGCCTCGGCGGCCAC AACCGCGAGGTCTGGCTGTCCTTCCGCGACGGCTCCAAACTATCTGACGT GTTACATCTGGCGTATCTTTCAGACCTGCCCCTGCAGCCACCAGCGACCC ATATTCCGGATTTCTACGCTAAATATGCGATCTCCACCCTGTGTCTGTCG ATCGAGTTCAAAAGACGGCCCGACCCGTCCACCGACTGGGTCATGGTCCG CTCCAACTCCAACAAGGTTTCCAATGGCCGGTATGATGCTGCTTTGCAAC TATTAGATGAGAGGGGCAATCTTCTCGCCTTGAGCAATCACGTTGTGTTT ACCTCAGACTTGAAGCCCCGGCCGGCTCGGCTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_010292-T2.utr3p1 | KJC3_010292-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR029069 |
DBxref | InterPro:IPR042171 |
DBxref | PFAM:PF13622 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:2948062..2949955 + |
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