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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2969100..2972683+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010300-T1 ID=KJC3_010300-T1|Name=KJC3_010300-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3584bp|location=Sequence derived from alignment at ch7:2969100..2972683+ (Aspergillus niger KJC3)
TTTGGCGCCTGGCGACAATGCTCTGTCGGTCGAACCTTCGTCGCCGTCGT
CGTGGATTGATGCTTCCAATCCCGAGCGGGTATCATCTTTGCTTGTTCTG
ACTCTTGCGAGCCAAACCCTCCCCCGAACTCCCCTAAACCATTGATTGAT
TTCCATGCGCACTACTCGTCATTGGGCTGGTCCCTAATTTTACCCGTGCG
GTTTGCGATCTGATAGGGTCTTACGACGTCGGCGCGTGCTGGAAAGAAGA
TCTGCCCTATCTCATCTCTCTCATTGAGTCAAAAGCTAAAATCCCATATG
ATACTACTCCTCCACCTTCCCTCCTATCCTTATTATTCTGATTATCATTA
TCATTATCATTACTACTTCCTGTGTTTATCATTGCACCAACGTTTCTTTA
TTGAATATATAGAATCGCTTTCGATCCGGCGACTTTTCTCTCCCTTTTTC
CCTTTTCTTGTTCACATAATCAAAGTGTTTGCTGTTGGCTTGTTTCTTGT
TCCAAAACAATCATCAAGATGGAACCGTCATTTCCCAACGTGATGAACCA
ACCTGTGCCGCCGGAACGGACTGAATTAGGGCCTCCGCCCATGGTCATCC
AACAGTACGCAAGGTATCCTCCGGCTCTGGAGCCTGGTTTACATAGCGCT
TCTTCCATAGGCAGTGCTCGCACTCACATAGCTCCCTCCAAATCCCCTCC
TCTGGCGCGCAAAGCTACCCCGCGCAGTCTTCAGGCATCGCCAACCGGCC
CACGGCCCATAGCGCCGCCTCCACCTCCACCTCCACCACCACCTGCAATG
GTGGCGCACTCTGGACCTTCGATCTCACCTCCGATGTATGATTCTATTCG
TCCCCGGCCTCCACGGGACTCGATGGATCAGACTGAAACCCGATCCCTGC
CTTCTCGCGATTTGACTGACAGCTCCATCGATGATGCCTACATCATGTTT
GTCTTCTACTGCAATCCAAACGTCCCTCTGTCCGTGGATACCTCAGAGCT
CCGCAAGAACTTTCGCTGCCCACCTCGGAGTGATGGCAAGAGTTTCAGTA
TATTCGCACTGTGGGAGCTTATTCGGAAGCTAGACAGCAAAGAGCTAAAG
ACATGGATACAACTGGCGATCGAGCTGGGGGTAGAACCGCCTTCATTAGA
GAAGAAACAGAGTACCCAAAAGGTCCAGCAATATGCTGTTCGGCTCAAGG
TTTGTCGCTAATCCCATTCCAGACTGCATGTTTAACTAGAAGACTAACGA
ATACCTAGCGCTGGATGCGCGCAATGCATGTGGATGCCTTCTTCGAGTAT
TGTCTCGGTCATCCGCATCCCTACTACACCCATCTTCCGCCTGCTAATGT
GATCAGCGACAGCCGCGATGGAGTGCCTCTTGAAGAAGATCTTGCGCTAC
GGGCTCTGGTTCCGCAATGGAGGCCGAAAAGGGGACGGAAACGAGCTGAG
GAAGAAAACGAAAGACTAGCCATGGCGAAAAGGCCCCATCTCGATCCAAC
AATGGGCGTCCTGCAGCCAGGGCCATTCCCAGGCCCTCCAGGACCATACC
CACCAGGTGCCCTGCCATTTAGCACCTTTCCTGACGAGATGGGGTCGCAT
GATCCGTGGATGGGCAGCGCACCTCCATTCCCACCGGAAGGGACGACTGA
ACCTTCGTCGCAGTCTAACCCGGACCTGCGGTGGCGACCTATCGAACGAG
ATGCTTCCCCAGGGGGTTATCCGCATTCTGCTATAGCACCTAGAAGCCAG
CATGAGTCTGATGTCTTCATCCAGCCTGCAGAACCGCGCTCAGCGGTCAC
AATGTCTTCTTCCGGGGAGAAGACGCGGCCTAAACGACGCCATGGCCCAG
CAGTGTCATCTGCCTGGCCGAGCAACACTGGCAGTAATGGAAAGACCCGA
GGCCGGCCACCAAATCGAGGGACTGTTTCTGGACCTTTCTCTTCGTTCCC
AGTCAATCCCAATCGCACTGATGCATCTCATTTACCGGGCCCAGGGCTTC
GGTCTTCCCCTGCTATGCTCCTGGATCAGGACCCTGCCAGTCGTTACAAT
CATTCTCCTTTCCAGCAGTCCCCTACGCCGTTCCATTTCGGTCCCAAGCC
AGATAAATTACAGCTCCAGGTACCACCCCACCCCGGCACACCTGTCCGTC
TGGCAACCCCTCCTACCCTGATGGTCAATGGTATCAACAATGCTCCTGGC
TCAACAAAGATGGAAGGGCAGGGAACGCAGCGTAATGGCACCCTTGCTCC
TCTAAACGACTTCATGAGTAATGTGGGCGTCACCAACCCATCTGCTTACG
CAAACCGCAATAGCGTACCACATGCGGATATATCTTCCGATGACGTTGTA
CGTGTACTGTCAAGCGAACTTCTTCGTGGAAAGACCACCGGTCGGTCTGC
TCCCCTCAGCACTGAAGAGGCCCGGGCTCTTGCAATGTCTGTAGTGTCCA
GCTTGACCACTACATATGCAAAGCTACCAGCCGGCTTGGCGGCGCTTATG
TCCGCCTTACATCTGGGACTTGGACAGCAATTTGGCTATCCAGGAGTGAC
AGACAGCCTGATGACCGTAAATGTCGAGTCAGGGCCTGCCATAACCTCAG
ACACGCCAAGCACCGATGGAAGCCCCAACTATGTGTACACCATTTCTCAT
GAGTACAAGCACGGACTTCGGTTTTCGACCAAAGTCACATACGGCGACCT
CAGCATTAGCACTCCCACTCCGGACAGCCACAAGCTCGACCTTACGCCCC
GGGTAACCGAGGAACTTGAAGCCAGCATAGCAGAAGCCGACAGCATGACA
GATGCTGAATTCGAAGTGGATGCGGAGGATTCCACCCCCGACGCAACGTG
GAAACAAAGATATCTCAAACTCCGAGCGCAGGTGCAGCGAAAGGAGCGAA
TGTTGTCGCAATATAAGCGCAAAATCCTAGAGTCTGTGATGGCAGACATA
TAGAGATGATTCGCGGCTCTGTGAGCACTGGTCGTTCACAGCGAGTCAGA
CTCTTAATCATCTCCTAACAAATCCCCTCCTCCTCCCCGACTTGTTGTGA
TACCCTATACAGTATATTCTCATATCAATGGTCGAGTCTCACCTGGACAC
ATTTATAAAACTTCATTTCTTCTGCTCTTGGTTGTCTGTCTGTTTGTCTG
TGGGCTGGAGCCAAATGGCGCTCTCCTGCTGTTTGTTGGTTTCGGTTCGG
TCTTCTTTACAGATACCCCTTGAGCGAACTTGTTCGATCTGCTTCAGAGC
CTGTTAATTAGTATAGAGTCTATTGATACCATCAAATGCTTGATTCATAT
CTGCAGTACCTGAAGCCCTATGCAAATCCCAGAGTCCATCAAAGTCGCCT
GTCGGAGTATCGTATGATACAATATCCATCCCTTATCGCCCAACCTAGTA
GAACGCAAGCAAGCAAGCAAAAATCAGAACGCATCAAACTTCCGTCTGCC
CCATCTATGGTCAACCAGAAACTCATCCTCCTCCAACGGCAAATTGCATA
ACCCAGCCCACCAACTATGGAATCCAGAGGAATCCAAAGCAAAGACCTCA
AACCTCATTCACCTCCACCCCCTCCTCATCATCC back to topCoding sequence (CDS) from alignment at ch7:2969100..2972683+ >KJC3_010300-T1 ID=KJC3_010300-T1|Name=KJC3_010300-T1|organism=Aspergillus niger KJC3|type=CDS|length=4752bp|location=Sequence derived from alignment at ch7:2969100..2972683+ (Aspergillus niger KJC3)
ATGGAACCGTCATTTCCCAACGTGATGAACCAACCTGTGCCGCCGGAACG
GACTGAATTAGGGCCTCCGCCCATGGTCATCCAACAGTACGCAAGGTATC
CTCCGGCTCTGGAGCCTGGTTTACATAGCGCTTCTTCCATAGGCAGTGCT
CGCACTCACATAGCTCCCTCCAAATCCCCTCCTCTGGCGCGCAAAGCTAC
CCCGCGCAGTCTTCAGGCATCGCCAACCGGCCCACGGCCCATAGCGCCGC
CTCCACCTCCACCTCCACCACCACCTGCAATGGTGGCGCACTCTGGACCT
TCGATCTCACCTCCGATGTATGATTCTATTCGTCCCCGGCCTCCACGGGA
CTCGATGGATCAGACTGAAACCCGATCCCTGCCTTCTCGCGATTTGACTG
ACAGCTCCATCGATGATGCCTACATCATGTTTGTCTTCTACTGCAATCCA
AACGTCCCTCTGTCCGTGGATACCTCAGAGCTCCGCAAGAACTTTCGCTG
CCCACCTCGGAGTGATGGCAAGAGTTTCAGTATATTCGCACTGTGGGAGC
TTATTCGGAAGCTAGACAGCAAAGAGCTAAAGACATGGATACAACTGGCG
ATCGAGCTGGGGGTAGAACCGCCTTCATTAGAGAAGAAACAGAGTACCCA
AAAGGTCCAGCAATATGCTGTTCGGCTCAAGCGCTGGATGCGCGCAATGC
ATGTGGATGCCTTCTTCGAGTATTGTCTCGGTCATCCGCATCCCTACTAC
ACCCATCTTCCGCCTGCTAATGTGATCAGCGACAGCCGCGATGGAGTGCC
TCTTGAAGAAGATCTTGCGCTACGGGCTCTGGTTCCGCAATGGAGGCCGA
AAAGGGGACGGAAACGAGCTGAGGAAGAAAACGAAAGACTAGCCATGGCG
AAAAGGCCCCATCTCGATCCAACAATGGGCGTCCTGCAGCCAGGGCCATT
CCCAGGCCCTCCAGGACCATACCCACCAGGTGCCCTGCCATTTAGCACCT
TTCCTGACGAGATGGGGTCGCATGATCCGTGGATGGGCAGCGCACCTCCA
TTCCCACCGGAAGGGACGACTGAACCTTCGTCGCAGTCTAACCCGGACCT
GCGGTGGCGACCTATCGAACGAGATGCTTCCCCAGGGGGTTATCCGCATT
CTGCTATAGCACCTAGAAGCCAGCATGAGTCTGATGTCTTCATCCAGCCT
GCAGAACCGCGCTCAGCGGTCACAATGTCTTCTTCCGGGGAGAAGACGCG
GCCTAAACGACGCCATGGCCCAGCAGTGTCATCTGCCTGGCCGAGCAACA
CTGGCAGTAATGGAAAGACCCGAGGCCGGCCACCAAATCGAGGGACTGTT
TCTGGACCTTTCTCTTCGTTCCCAGTCAATCCCAATCGCACTGATGCATC
TCATTTACCGGGCCCAGGGCTTCGGTCTTCCCCTGCTATGCTCCTGGATC
AGGACCCTGCCAGTCGTTACAATCATTCTCCTTTCCAGCAGTCCCCTACG
CCGTTCCATTTCGGTCCCAAGCCAGATAAATTACAGCTCCAGGTACCACC
CCACCCCGGCACACCTGTCCGTCTGGCAACCCCTCCTACCCTGATGGTCA
ATGGTATCAACAATGCTCCTGGCTCAACAAAGATGGAAGGGCAGGGAACG
CAGCGTAATGGCACCCTTGCTCCTCTAAACGACTTCATGAGTAATGTGGG
CGTCACCAACCCATCTGCTTACGCAAACCGCAATAGCGTACCACATGCGG
ATATATCTTCCGATGACGTTGTACGTGTACTGTCAAGCGAACTTCTTCGT
GGAAAGACCACCGGTCGGTCTGCTCCCCTCAGCACTGAAGAGGCCCGGGC
TCTTGCAATGTCTGTAGTGTCCAGCTTGACCACTACATATGCAAAGCTAC
CAGCCGGCTTGGCGGCGCTTATGTCCGCCTTACATCTGGGACTTGGACAG
CAATTTGGCTATCCAGGAGTGACAGACAGCCTGATGACCGTAAATGTCGA
GTCAGGGCCTGCCATAACCTCAGACACGCCAAGCACCGATGGAAGCCCCA
ACTATGTGTACACCATTTCTCATGAGTACAAGCACGGACTTCGGTTTTCG
ACCAAAGTCACATACGGCGACCTCAGCATTAGCACTCCCACTCCGGACAG
CCACAAGCTCGACCTTACGCCCCGGGTAACCGAGGAACTTGAAGCCAGCA
TAGCAGAAGCCGACAGCATGACAGATGCTGAATTCGAAGTGGATGCGGAG
GATTCCACCCCCGACGCAACGTGGAAACAAAGATATCTCAAACTCCGAGC
GCAGGTGCAGCGAAAGGAGCGAATGTTGTCGCAATATAAGCGCAAAATCC
TAGAGTCTGTGATGGCAGACATATAGATGGAACCGTCATTTCCCAACGTG
ATGAACCAACCTGTGCCGCCGGAACGGACTGAATTAGGGCCTCCGCCCAT
GGTCATCCAACAGTACGCAAGGTATCCTCCGGCTCTGGAGCCTGGTTTAC
ATAGCGCTTCTTCCATAGGCAGTGCTCGCACTCACATAGCTCCCTCCAAA
TCCCCTCCTCTGGCGCGCAAAGCTACCCCGCGCAGTCTTCAGGCATCGCC
AACCGGCCCACGGCCCATAGCGCCGCCTCCACCTCCACCTCCACCACCAC
CTGCAATGGTGGCGCACTCTGGACCTTCGATCTCACCTCCGATGTATGAT
TCTATTCGTCCCCGGCCTCCACGGGACTCGATGGATCAGACTGAAACCCG
ATCCCTGCCTTCTCGCGATTTGACTGACAGCTCCATCGATGATGCCTACA
TCATGTTTGTCTTCTACTGCAATCCAAACGTCCCTCTGTCCGTGGATACC
TCAGAGCTCCGCAAGAACTTTCGCTGCCCACCTCGGAGTGATGGCAAGAG
TTTCAGTATATTCGCACTGTGGGAGCTTATTCGGAAGCTAGACAGCAAAG
AGCTAAAGACATGGATACAACTGGCGATCGAGCTGGGGGTAGAACCGCCT
TCATTAGAGAAGAAACAGAGTACCCAAAAGGTCCAGCAATATGCTGTTCG
GCTCAAGCGCTGGATGCGCGCAATGCATGTGGATGCCTTCTTCGAGTATT
GTCTCGGTCATCCGCATCCCTACTACACCCATCTTCCGCCTGCTAATGTG
ATCAGCGACAGCCGCGATGGAGTGCCTCTTGAAGAAGATCTTGCGCTACG
GGCTCTGGTTCCGCAATGGAGGCCGAAAAGGGGACGGAAACGAGCTGAGG
AAGAAAACGAAAGACTAGCCATGGCGAAAAGGCCCCATCTCGATCCAACA
ATGGGCGTCCTGCAGCCAGGGCCATTCCCAGGCCCTCCAGGACCATACCC
ACCAGGTGCCCTGCCATTTAGCACCTTTCCTGACGAGATGGGGTCGCATG
ATCCGTGGATGGGCAGCGCACCTCCATTCCCACCGGAAGGGACGACTGAA
CCTTCGTCGCAGTCTAACCCGGACCTGCGGTGGCGACCTATCGAACGAGA
TGCTTCCCCAGGGGGTTATCCGCATTCTGCTATAGCACCTAGAAGCCAGC
ATGAGTCTGATGTCTTCATCCAGCCTGCAGAACCGCGCTCAGCGGTCACA
ATGTCTTCTTCCGGGGAGAAGACGCGGCCTAAACGACGCCATGGCCCAGC
AGTGTCATCTGCCTGGCCGAGCAACACTGGCAGTAATGGAAAGACCCGAG
GCCGGCCACCAAATCGAGGGACTGTTTCTGGACCTTTCTCTTCGTTCCCA
GTCAATCCCAATCGCACTGATGCATCTCATTTACCGGGCCCAGGGCTTCG
GTCTTCCCCTGCTATGCTCCTGGATCAGGACCCTGCCAGTCGTTACAATC
ATTCTCCTTTCCAGCAGTCCCCTACGCCGTTCCATTTCGGTCCCAAGCCA
GATAAATTACAGCTCCAGGTACCACCCCACCCCGGCACACCTGTCCGTCT
GGCAACCCCTCCTACCCTGATGGTCAATGGTATCAACAATGCTCCTGGCT
CAACAAAGATGGAAGGGCAGGGAACGCAGCGTAATGGCACCCTTGCTCCT
CTAAACGACTTCATGAGTAATGTGGGCGTCACCAACCCATCTGCTTACGC
AAACCGCAATAGCGTACCACATGCGGATATATCTTCCGATGACGTTGTAC
GTGTACTGTCAAGCGAACTTCTTCGTGGAAAGACCACCGGTCGGTCTGCT
CCCCTCAGCACTGAAGAGGCCCGGGCTCTTGCAATGTCTGTAGTGTCCAG
CTTGACCACTACATATGCAAAGCTACCAGCCGGCTTGGCGGCGCTTATGT
CCGCCTTACATCTGGGACTTGGACAGCAATTTGGCTATCCAGGAGTGACA
GACAGCCTGATGACCGTAAATGTCGAGTCAGGGCCTGCCATAACCTCAGA
CACGCCAAGCACCGATGGAAGCCCCAACTATGTGTACACCATTTCTCATG
AGTACAAGCACGGACTTCGGTTTTCGACCAAAGTCACATACGGCGACCTC
AGCATTAGCACTCCCACTCCGGACAGCCACAAGCTCGACCTTACGCCCCG
GGTAACCGAGGAACTTGAAGCCAGCATAGCAGAAGCCGACAGCATGACAG
ATGCTGAATTCGAAGTGGATGCGGAGGATTCCACCCCCGACGCAACGTGG
AAACAAAGATATCTCAAACTCCGAGCGCAGGTGCAGCGAAAGGAGCGAAT
GTTGTCGCAATATAAGCGCAAAATCCTAGAGTCTGTGATGGCAGACATAT
AG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010300-T1.utr5p1 | KJC3_010300-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010300-T1.utr3p1 | KJC3_010300-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018562 |
| DBxref | PFAM:PF09441 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2969100..2972683 + |
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