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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2969100..2972683+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010300-T2 ID=KJC3_010300-T2|Name=KJC3_010300-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3584bp|location=Sequence derived from alignment at ch7:2969100..2972683+ (Aspergillus niger KJC3)
TTTGGCGCCTGGCGACAATGCTCTGTCGGTCGAACCTTCGTCGCCGTCGT
CGTGGATTGATGCTTCCAATCCCGAGCGGGTATCATCTTTGCTTGTTCTG
ACTCTTGCGAGCCAAACCCTCCCCCGAACTCCCCTAAACCATTGATTGAT
TTCCATGCGCACTACTCGTCATTGGGCTGGTCCCTAATTTTACCCGTGCG
GTTTGCGATCTGATAGGGTCTTACGACGTCGGCGCGTGCTGGAAAGAAGA
TCTGCCCTATCTCATCTCTCTCATTGAGTCAAAAGCTAAAATCCCATATG
ATACTACTCCTCCACCTTCCCTCCTATCCTTATTATTCTGATTATCATTA
TCATTATCATTACTACTTCCTGTGTTTATCATTGCACCAACGTTTCTTTA
TTGAATATATAGAATCGCTTTCGATCCGGCGACTTTTCTCTCCCTTTTTC
CCTTTTCTTGTTCACATAATCAAAGTGTTTGCTGTTGGCTTGTTTCTTGT
TCCAAAACAATCATCAAGATGGAACCGTCATTTCCCAACGTGATGAACCA
ACCTGTGCCGCCGGAACGGACTGAATTAGGGCCTCCGCCCATGGTCATCC
AACAGTACGCAAGGTATCCTCCGGCTCTGGAGCCTGGTTTACATAGCGCT
TCTTCCATAGGCAGTGCTCGCACTCACATAGCTCCCTCCAAATCCCCTCC
TCTGGCGCGCAAAGCTACCCCGCGCAGTCTTCAGGCATCGCCAACCGGCC
CACGGCCCATAGCGCCGCCTCCACCTCCACCTCCACCACCACCTGCAATG
GTGGCGCACTCTGGACCTTCGATCTCACCTCCGATGTATGATTCTATTCG
TCCCCGGCCTCCACGGGACTCGATGGATCAGACTGAAACCCGATCCCTGC
CTTCTCGCGATTTGACTGACAGCTCCATCGATGATGCCTACATCATGTTT
GTCTTCTACTGCAATCCAAACGTCCCTCTGTCCGTGGATACCTCAGAGCT
CCGCAAGAACTTTCGCTGCCCACCTCGGAGTGATGGCAAGAGTTTCAGTA
TATTCGCACTGTGGGAGCTTATTCGGAAGCTAGACAGCAAAGAGCTAAAG
ACATGGATACAACTGGCGATCGAGCTGGGGGTAGAACCGCCTTCATTAGA
GAAGAAACAGAGTACCCAAAAGGTCCAGCAATATGCTGTTCGGCTCAAGG
TTTGTCGCTAATCCCATTCCAGACTGCATGTTTAACTAGAAGACTAACGA
ATACCTAGCGCTGGATGCGCGCAATGCATGTGGATGCCTTCTTCGAGTAT
TGTCTCGGTCATCCGCATCCCTACTACACCCATCTTCCGCCTGCTAATGT
GATCAGCGACAGCCGCGATGGAGTGCCTCTTGAAGAAGATCTTGCGCTAC
GGGCTCTGGTTCCGCAATGGAGGCCGAAAAGGGGACGGAAACGAGCTGAG
GAAGAAAACGAAAGACTAGCCATGGCGAAAAGGCCCCATCTCGATCCAAC
AATGGGCGTCCTGCAGCCAGGGCCATTCCCAGGCCCTCCAGGACCATACC
CACCAGGTGCCCTGCCATTTAGCACCTTTCCTGACGAGATGGGGTCGCAT
GATCCGTGGATGGGCAGCGCACCTCCATTCCCACCGGAAGGGACGACTGA
ACCTTCGTCGCAGTCTAACCCGGACCTGCGGTGGCGACCTATCGAACGAG
ATGCTTCCCCAGGGGGTTATCCGCATTCTGCTATAGCACCTAGAAGCCAG
CATGAGTCTGATGTCTTCATCCAGCCTGCAGAACCGCGCTCAGCGGTCAC
AATGTCTTCTTCCGGGGAGAAGACGCGGCCTAAACGACGCCATGGCCCAG
CAGTGTCATCTGCCTGGCCGAGCAACACTGGCAGTAATGGAAAGACCCGA
GGCCGGCCACCAAATCGAGGGACTGTTTCTGGACCTTTCTCTTCGTTCCC
AGTCAATCCCAATCGCACTGATGCATCTCATTTACCGGGCCCAGGGCTTC
GGTCTTCCCCTGCTATGCTCCTGGATCAGGACCCTGCCAGTCGTTACAAT
CATTCTCCTTTCCAGCAGTCCCCTACGCCGTTCCATTTCGGTCCCAAGCC
AGATAAATTACAGCTCCAGGTACCACCCCACCCCGGCACACCTGTCCGTC
TGGCAACCCCTCCTACCCTGATGGTCAATGGTATCAACAATGCTCCTGGC
TCAACAAAGATGGAAGGGCAGGGAACGCAGCGTAATGGCACCCTTGCTCC
TCTAAACGACTTCATGAGTAATGTGGGCGTCACCAACCCATCTGCTTACG
CAAACCGCAATAGCGTACCACATGCGGATATATCTTCCGATGACGTTGTA
CGTGTACTGTCAAGCGAACTTCTTCGTGGAAAGACCACCGGTCGGTCTGC
TCCCCTCAGCACTGAAGAGGCCCGGGCTCTTGCAATGTCTGTAGTGTCCA
GCTTGACCACTACATATGCAAAGCTACCAGCCGGCTTGGCGGCGCTTATG
TCCGCCTTACATCTGGGACTTGGACAGCAATTTGGCTATCCAGGAGTGAC
AGACAGCCTGATGACCGTAAATGTCGAGTCAGGGCCTGCCATAACCTCAG
ACACGCCAAGCACCGATGGAAGCCCCAACTATGTGTACACCATTTCTCAT
GAGTACAAGCACGGACTTCGGTTTTCGACCAAAGTCACATACGGCGACCT
CAGCATTAGCACTCCCACTCCGGACAGCCACAAGCTCGACCTTACGCCCC
GGGTAACCGAGGAACTTGAAGCCAGCATAGCAGAAGCCGACAGCATGACA
GATGCTGAATTCGAAGTGGATGCGGAGGATTCCACCCCCGACGCAACGTG
GAAACAAAGATATCTCAAACTCCGAGCGCAGGTGCAGCGAAAGGAGCGAA
TGTTGTCGCAATATAAGCGCAAAATCCTAGAGTCTGTGATGGCAGACATA
TAGAGATGATTCGCGGCTCTGTGAGCACTGGTCGTTCACAGCGAGTCAGA
CTCTTAATCATCTCCTAACAAATCCCCTCCTCCTCCCCGACTTGTTGTGA
TACCCTATACAGTATATTCTCATATCAATGGTCGAGTCTCACCTGGACAC
ATTTATAAAACTTCATTTCTTCTGCTCTTGGTTGTCTGTCTGTTTGTCTG
TGGGCTGGAGCCAAATGGCGCTCTCCTGCTGTTTGTTGGTTTCGGTTCGG
TCTTCTTTACAGATACCCCTTGAGCGAACTTGTTCGATCTGCTTCAGAGC
CTGTTAATTAGTATAGAGTCTATTGATACCATCAAATGCTTGATTCATAT
CTGCAGTACCTGAAGCCCTATGCAAATCCCAGAGTCCATCAAAGTCGCCT
GTCGGAGTATCGTATGATACAATATCCATCCCTTATCGCCCAACCTAGTA
GAACGCAAGCAAGCAAGCAAAAATCAGAACGCATCAAACTTCCGTCTGCC
CCATCTATGGTCAACCAGAAACTCATCCTCCTCCAACGGCAAATTGCATA
ACCCAGCCCACCAACTATGGAATCCAGAGGAATCCAAAGCAAAGACCTCA
AACCTCATTCACCTCCACCCCCTCCTCATCATCC back to topCoding sequence (CDS) from alignment at ch7:2969100..2972683+ >KJC3_010300-T2 ID=KJC3_010300-T2|Name=KJC3_010300-T2|organism=Aspergillus niger KJC3|type=CDS|length=4194bp|location=Sequence derived from alignment at ch7:2969100..2972683+ (Aspergillus niger KJC3)
ATGGTGGCGCACTCTGGACCTTCGATCTCACCTCCGATGTATGATTCTAT
TCGTCCCCGGCCTCCACGGGACTCGATGGATCAGACTGAAACCCGATCCC
TGCCTTCTCGCGATTTGACTGACAGCTCCATCGATGATGCCTACATCATG
TTTGTCTTCTACTGCAATCCAAACGTCCCTCTGTCCGTGGATACCTCAGA
GCTCCGCAAGAACTTTCGCTGCCCACCTCGGAGTGATGGCAAGAGTTTCA
GTATATTCGCACTGTGGGAGCTTATTCGGAAGCTAGACAGCAAAGAGCTA
AAGACATGGATACAACTGGCGATCGAGCTGGGGGTAGAACCGCCTTCATT
AGAGAAGAAACAGAGTACCCAAAAGGTCCAGCAATATGCTGTTCGGCTCA
AGCGCTGGATGCGCGCAATGCATGTGGATGCCTTCTTCGAGTATTGTCTC
GGTCATCCGCATCCCTACTACACCCATCTTCCGCCTGCTAATGTGATCAG
CGACAGCCGCGATGGAGTGCCTCTTGAAGAAGATCTTGCGCTACGGGCTC
TGGTTCCGCAATGGAGGCCGAAAAGGGGACGGAAACGAGCTGAGGAAGAA
AACGAAAGACTAGCCATGGCGAAAAGGCCCCATCTCGATCCAACAATGGG
CGTCCTGCAGCCAGGGCCATTCCCAGGCCCTCCAGGACCATACCCACCAG
GTGCCCTGCCATTTAGCACCTTTCCTGACGAGATGGGGTCGCATGATCCG
TGGATGGGCAGCGCACCTCCATTCCCACCGGAAGGGACGACTGAACCTTC
GTCGCAGTCTAACCCGGACCTGCGGTGGCGACCTATCGAACGAGATGCTT
CCCCAGGGGGTTATCCGCATTCTGCTATAGCACCTAGAAGCCAGCATGAG
TCTGATGTCTTCATCCAGCCTGCAGAACCGCGCTCAGCGGTCACAATGTC
TTCTTCCGGGGAGAAGACGCGGCCTAAACGACGCCATGGCCCAGCAGTGT
CATCTGCCTGGCCGAGCAACACTGGCAGTAATGGAAAGACCCGAGGCCGG
CCACCAAATCGAGGGACTGTTTCTGGACCTTTCTCTTCGTTCCCAGTCAA
TCCCAATCGCACTGATGCATCTCATTTACCGGGCCCAGGGCTTCGGTCTT
CCCCTGCTATGCTCCTGGATCAGGACCCTGCCAGTCGTTACAATCATTCT
CCTTTCCAGCAGTCCCCTACGCCGTTCCATTTCGGTCCCAAGCCAGATAA
ATTACAGCTCCAGGTACCACCCCACCCCGGCACACCTGTCCGTCTGGCAA
CCCCTCCTACCCTGATGGTCAATGGTATCAACAATGCTCCTGGCTCAACA
AAGATGGAAGGGCAGGGAACGCAGCGTAATGGCACCCTTGCTCCTCTAAA
CGACTTCATGAGTAATGTGGGCGTCACCAACCCATCTGCTTACGCAAACC
GCAATAGCGTACCACATGCGGATATATCTTCCGATGACGTTGTACGTGTA
CTGTCAAGCGAACTTCTTCGTGGAAAGACCACCGGTCGGTCTGCTCCCCT
CAGCACTGAAGAGGCCCGGGCTCTTGCAATGTCTGTAGTGTCCAGCTTGA
CCACTACATATGCAAAGCTACCAGCCGGCTTGGCGGCGCTTATGTCCGCC
TTACATCTGGGACTTGGACAGCAATTTGGCTATCCAGGAGTGACAGACAG
CCTGATGACCGTAAATGTCGAGTCAGGGCCTGCCATAACCTCAGACACGC
CAAGCACCGATGGAAGCCCCAACTATGTGTACACCATTTCTCATGAGTAC
AAGCACGGACTTCGGTTTTCGACCAAAGTCACATACGGCGACCTCAGCAT
TAGCACTCCCACTCCGGACAGCCACAAGCTCGACCTTACGCCCCGGGTAA
CCGAGGAACTTGAAGCCAGCATAGCAGAAGCCGACAGCATGACAGATGCT
GAATTCGAAGTGGATGCGGAGGATTCCACCCCCGACGCAACGTGGAAACA
AAGATATCTCAAACTCCGAGCGCAGGTGCAGCGAAAGGAGCGAATGTTGT
CGCAATATAAGCGCAAAATCCTAGAGTCTGTGATGGCAGACATATAGATG
GTGGCGCACTCTGGACCTTCGATCTCACCTCCGATGTATGATTCTATTCG
TCCCCGGCCTCCACGGGACTCGATGGATCAGACTGAAACCCGATCCCTGC
CTTCTCGCGATTTGACTGACAGCTCCATCGATGATGCCTACATCATGTTT
GTCTTCTACTGCAATCCAAACGTCCCTCTGTCCGTGGATACCTCAGAGCT
CCGCAAGAACTTTCGCTGCCCACCTCGGAGTGATGGCAAGAGTTTCAGTA
TATTCGCACTGTGGGAGCTTATTCGGAAGCTAGACAGCAAAGAGCTAAAG
ACATGGATACAACTGGCGATCGAGCTGGGGGTAGAACCGCCTTCATTAGA
GAAGAAACAGAGTACCCAAAAGGTCCAGCAATATGCTGTTCGGCTCAAGC
GCTGGATGCGCGCAATGCATGTGGATGCCTTCTTCGAGTATTGTCTCGGT
CATCCGCATCCCTACTACACCCATCTTCCGCCTGCTAATGTGATCAGCGA
CAGCCGCGATGGAGTGCCTCTTGAAGAAGATCTTGCGCTACGGGCTCTGG
TTCCGCAATGGAGGCCGAAAAGGGGACGGAAACGAGCTGAGGAAGAAAAC
GAAAGACTAGCCATGGCGAAAAGGCCCCATCTCGATCCAACAATGGGCGT
CCTGCAGCCAGGGCCATTCCCAGGCCCTCCAGGACCATACCCACCAGGTG
CCCTGCCATTTAGCACCTTTCCTGACGAGATGGGGTCGCATGATCCGTGG
ATGGGCAGCGCACCTCCATTCCCACCGGAAGGGACGACTGAACCTTCGTC
GCAGTCTAACCCGGACCTGCGGTGGCGACCTATCGAACGAGATGCTTCCC
CAGGGGGTTATCCGCATTCTGCTATAGCACCTAGAAGCCAGCATGAGTCT
GATGTCTTCATCCAGCCTGCAGAACCGCGCTCAGCGGTCACAATGTCTTC
TTCCGGGGAGAAGACGCGGCCTAAACGACGCCATGGCCCAGCAGTGTCAT
CTGCCTGGCCGAGCAACACTGGCAGTAATGGAAAGACCCGAGGCCGGCCA
CCAAATCGAGGGACTGTTTCTGGACCTTTCTCTTCGTTCCCAGTCAATCC
CAATCGCACTGATGCATCTCATTTACCGGGCCCAGGGCTTCGGTCTTCCC
CTGCTATGCTCCTGGATCAGGACCCTGCCAGTCGTTACAATCATTCTCCT
TTCCAGCAGTCCCCTACGCCGTTCCATTTCGGTCCCAAGCCAGATAAATT
ACAGCTCCAGGTACCACCCCACCCCGGCACACCTGTCCGTCTGGCAACCC
CTCCTACCCTGATGGTCAATGGTATCAACAATGCTCCTGGCTCAACAAAG
ATGGAAGGGCAGGGAACGCAGCGTAATGGCACCCTTGCTCCTCTAAACGA
CTTCATGAGTAATGTGGGCGTCACCAACCCATCTGCTTACGCAAACCGCA
ATAGCGTACCACATGCGGATATATCTTCCGATGACGTTGTACGTGTACTG
TCAAGCGAACTTCTTCGTGGAAAGACCACCGGTCGGTCTGCTCCCCTCAG
CACTGAAGAGGCCCGGGCTCTTGCAATGTCTGTAGTGTCCAGCTTGACCA
CTACATATGCAAAGCTACCAGCCGGCTTGGCGGCGCTTATGTCCGCCTTA
CATCTGGGACTTGGACAGCAATTTGGCTATCCAGGAGTGACAGACAGCCT
GATGACCGTAAATGTCGAGTCAGGGCCTGCCATAACCTCAGACACGCCAA
GCACCGATGGAAGCCCCAACTATGTGTACACCATTTCTCATGAGTACAAG
CACGGACTTCGGTTTTCGACCAAAGTCACATACGGCGACCTCAGCATTAG
CACTCCCACTCCGGACAGCCACAAGCTCGACCTTACGCCCCGGGTAACCG
AGGAACTTGAAGCCAGCATAGCAGAAGCCGACAGCATGACAGATGCTGAA
TTCGAAGTGGATGCGGAGGATTCCACCCCCGACGCAACGTGGAAACAAAG
ATATCTCAAACTCCGAGCGCAGGTGCAGCGAAAGGAGCGAATGTTGTCGC
AATATAAGCGCAAAATCCTAGAGTCTGTGATGGCAGACATATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010300-T2.utr3p1 | KJC3_010300-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018562 |
| DBxref | PFAM:PF09441 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2969100..2972683 + |
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