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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2972212..2973517- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010301-T1 ID=KJC3_010301-T1|Name=KJC3_010301-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1306bp|location=Sequence derived from alignment at ch7:2972212..2973517- (Aspergillus niger KJC3)
AAACGAGAGAGGATTTTCACCTACATCTACTCACACCCACATCCCTTTTA
CAATCAGACTCAAAAGCTGAAATAAAACCCAGCCCAACATGTCCACCACA
ACTACCCCGACCAAGCCCACACGCATCACCCCTGACGAGCAGCTTCATTT
CCTCCTCAGCTGCATTCGCCACTCCAACAGCGGCAAGGTAAGTCCCCTTC
TATCCTATTCTCTCCAAACAAAGAAACTCACCCTAACAACCAAATAGATC
GACTTCACCACCGTCGCCAAAGAATGCAGTATCGTCACCAAAGCCGCTGC
GTACGTTCACCCCCCACCTTCGATCTTATATATCACCTACTAGTACCCAA
GAAGCCACGAACAGTAACTTACACTACTGCGCCAACCCTAACATAATATG
GTACTAATCATGCTACCCATAACCAGAGCAAAGCGCTACGAACGCCTCCT
GAAGTCCCACGGCATCAACACCTCAGGCAGTGGCTCACTCCCCTCCTCCT
CTAACAACACGCCTGCCAAGAAACGACCGGGAACAGCTACTACCACTGCT
AGTAGTACTGCCGCCGCAGGGAGCACAACTCCGACCTCGCGAAAGCGCAA
GGCCGATGGCATCAGCGATGCATCGAAGAAAGCGAAGGGGTTGAAGAAGA
TGGCTGTCGCTCGGGCGGAGAGTTTGATGCAGAAGAAGCAGCATGCCGGT
GTTGGAATTAAGAAGGAGGAAGGTGTTGATGATGATGAGGAGGAGACTGA
GGAGGATGAGGAGATGAGGGCGGCATTGGAGGAAGAGGGGCTTTCTGGTG
TTGGTGGGGGGTTGGCTGTGAAGGAGGAGGCTGGGGATGATGAGGAGGGG
GTGGAGGTGAATGAGGTTTGAGGTCTTTGCTTTGGATTCCTCTGGATTCC
ATAGTTGGTGGGCTGGGTTATGCAATTTGCCGTTGGAGGAGGATGAGTTT
CTGGTTGACCATAGATGGGGCAGACGGAAGTTTGATGCGTTCTGATTTTT
GCTTGCTTGCTTGCGTTCTACTAGGTTGGGCGATAAGGGATGGATATTGT
ATCATACGATACTCCGACAGGCGACTTTGATGGACTCTGGGATTTGCATA
GGGCTTCAGGTACTGCAGATATGAATCAAGCATTTGATGGTATCAATAGA
CTCTATACTAATTAACAGGCTCTGAAGCAGATCGAACAAGTTCGCTCAAG
GGGTATCTGTAAAGAAGACCGAACCGAAACCAACAAACAGCAGGAGAGCG
CCATTTGGCTCCAGCCCACAGACAAACAGACAGACAACCAAGAGCAGAAG
AAATGA back to topCoding sequence (CDS) from alignment at ch7:2972212..2973517- >KJC3_010301-T1 ID=KJC3_010301-T1|Name=KJC3_010301-T1|organism=Aspergillus niger KJC3|type=CDS|length=2916bp|location=Sequence derived from alignment at ch7:2972212..2973517- (Aspergillus niger KJC3)
GCTCTGAAGCAGATCGAACAAGTTCGCTCAAGGGGTATCTGTAAAGAAGA
CCGAACCGAAACCAACAAACAGCAGGAGAGCGCCATTTGGCTCCAGCCCA
CAGACAAACAGACAGACAACCAAGAGCAGAAGAAATGAAGCAAAGCGCTA
CGAACGCCTCCTGAAGTCCCACGGCATCAACACCTCAGGCAGTGGCTCAC
TCCCCTCCTCCTCTAACAACACGCCTGCCAAGAAACGACCGGGAACAGCT
ACTACCACTGCTAGTAGTACTGCCGCCGCAGGGAGCACAACTCCGACCTC
GCGAAAGCGCAAGGCCGATGGCATCAGCGATGCATCGAAGAAAGCGAAGG
GGTTGAAGAAGATGGCTGTCGCTCGGGCGGAGAGTTTGATGCAGAAGAAG
CAGCATGCCGGTGTTGGAATTAAGAAGGAGGAAGGTGTTGATGATGATGA
GGAGGAGACTGAGGAGGATGAGGAGATGAGGGCGGCATTGGAGGAAGAGG
GGCTTTCTGGTGTTGGTGGGGGGTTGGCTGTGAAGGAGGAGGCTGGGGAT
GATGAGGAGGGGGTGGAGGTGAATGAGATCGACTTCACCACCGTCGCCAA
AGAATGCAGTATCGTCACCAAAGCCGCTGCATGTCCACCACAACTACCCC
GACCAAGCCCACACGCATCACCCCTGACGAGCAGCTTCATTTCCTCCTCA
GCTGCATTCGCCACTCCAACAGCGGCAAGGCTCTGAAGCAGATCGAACAA
GTTCGCTCAAGGGGTATCTGTAAAGAAGACCGAACCGAAACCAACAAACA
GCAGGAGAGCGCCATTTGGCTCCAGCCCACAGACAAACAGACAGACAACC
AAGAGCAGAAGAAATGAAGCAAAGCGCTACGAACGCCTCCTGAAGTCCCA
CGGCATCAACACCTCAGGCAGTGGCTCACTCCCCTCCTCCTCTAACAACA
CGCCTGCCAAGAAACGACCGGGAACAGCTACTACCACTGCTAGTAGTACT
GCCGCCGCAGGGAGCACAACTCCGACCTCGCGAAAGCGCAAGGCCGATGG
CATCAGCGATGCATCGAAGAAAGCGAAGGGGTTGAAGAAGATGGCTGTCG
CTCGGGCGGAGAGTTTGATGCAGAAGAAGCAGCATGCCGGTGTTGGAATT
AAGAAGGAGGAAGGTGTTGATGATGATGAGGAGGAGACTGAGGAGGATGA
GGAGATGAGGGCGGCATTGGAGGAAGAGGGGCTTTCTGGTGTTGGTGGGG
GGTTGGCTGTGAAGGAGGAGGCTGGGGATGATGAGGAGGGGGTGGAGGTG
AATGAGATCGACTTCACCACCGTCGCCAAAGAATGCAGTATCGTCACCAA
AGCCGCTGCATGTCCACCACAACTACCCCGACCAAGCCCACACGCATCAC
CCCTGACGAGCAGCTTCATTTCCTCCTCAGCTGCATTCGCCACTCCAACA
GCGGCAAGGCTCTGAAGCAGATCGAACAAGTTCGCTCAAGGGGTATCTGT
AAAGAAGACCGAACCGAAACCAACAAACAGCAGGAGAGCGCCATTTGGCT
CCAGCCCACAGACAAACAGACAGACAACCAAGAGCAGAAGAAATGAAGCA
AAGCGCTACGAACGCCTCCTGAAGTCCCACGGCATCAACACCTCAGGCAG
TGGCTCACTCCCCTCCTCCTCTAACAACACGCCTGCCAAGAAACGACCGG
GAACAGCTACTACCACTGCTAGTAGTACTGCCGCCGCAGGGAGCACAACT
CCGACCTCGCGAAAGCGCAAGGCCGATGGCATCAGCGATGCATCGAAGAA
AGCGAAGGGGTTGAAGAAGATGGCTGTCGCTCGGGCGGAGAGTTTGATGC
AGAAGAAGCAGCATGCCGGTGTTGGAATTAAGAAGGAGGAAGGTGTTGAT
GATGATGAGGAGGAGACTGAGGAGGATGAGGAGATGAGGGCGGCATTGGA
GGAAGAGGGGCTTTCTGGTGTTGGTGGGGGGTTGGCTGTGAAGGAGGAGG
CTGGGGATGATGAGGAGGGGGTGGAGGTGAATGAGATCGACTTCACCACC
GTCGCCAAAGAATGCAGTATCGTCACCAAAGCCGCTGCATGTCCACCACA
ACTACCCCGACCAAGCCCACACGCATCACCCCTGACGAGCAGCTTCATTT
CCTCCTCAGCTGCATTCGCCACTCCAACAGCGGCAAGGCTCTGAAGCAGA
TCGAACAAGTTCGCTCAAGGGGTATCTGTAAAGAAGACCGAACCGAAACC
AACAAACAGCAGGAGAGCGCCATTTGGCTCCAGCCCACAGACAAACAGAC
AGACAACCAAGAGCAGAAGAAATGAAGCAAAGCGCTACGAACGCCTCCTG
AAGTCCCACGGCATCAACACCTCAGGCAGTGGCTCACTCCCCTCCTCCTC
TAACAACACGCCTGCCAAGAAACGACCGGGAACAGCTACTACCACTGCTA
GTAGTACTGCCGCCGCAGGGAGCACAACTCCGACCTCGCGAAAGCGCAAG
GCCGATGGCATCAGCGATGCATCGAAGAAAGCGAAGGGGTTGAAGAAGAT
GGCTGTCGCTCGGGCGGAGAGTTTGATGCAGAAGAAGCAGCATGCCGGTG
TTGGAATTAAGAAGGAGGAAGGTGTTGATGATGATGAGGAGGAGACTGAG
GAGGATGAGGAGATGAGGGCGGCATTGGAGGAAGAGGGGCTTTCTGGTGT
TGGTGGGGGGTTGGCTGTGAAGGAGGAGGCTGGGGATGATGAGGAGGGGG
TGGAGGTGAATGAGATCGACTTCACCACCGTCGCCAAAGAATGCAGTATC
GTCACCAAAGCCGCTGCATGTCCACCACAACTACCCCGACCAAGCCCACA
CGCATCACCCCTGACGAGCAGCTTCATTTCCTCCTCAGCTGCATTCGCCA
CTCCAACAGCGGCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010301-T1.utr5p1 | KJC3_010301-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2972212..2973517 - |
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