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KJC3_010306-T1, KJC3_010306-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010306-T1
Unique NameKJC3_010306-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2981114..2982753+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010306-T1 ID=KJC3_010306-T1|Name=KJC3_010306-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1640bp|location=Sequence derived from alignment at ch7:2981114..2982753+ (Aspergillus niger KJC3)
TGTCAAGTGACTTGGCGGCGGGTCTCCCTTTGCCTGCCCCGGATTTCCTC
AGCGCAGCTGCACCCTTTCGCTCGTCATCATGGCATCCCTTTCGCAATAC
AGCCCTGGGTGGTCGCTGGGTGCTCATGCACCTTCTTCCACAATGGCCTC
CACTCTGTCTTGCTTTCACTATGTTTTGATCACCCCCAAGGGCGGGGTCG
CGACCTAGAGTTAGATCGTGATCGCGACGGCGTTGACTCACTACAGCGCC
GCAGCTACCTCTGTGCCGAAGACTCGCAATTGAACCACATAATCTTTTCT
CCATACCTTTTGACCTGATTAACTGTACTAGGTACATGTGACTATCAAAT
GAATGTCTACTGGTGTATTCGCTGACGACCCTAGATCCTTTCAAACCACT
GAGCCATGCCCTTCCATCAATTGGCCACGGAGCTATTGCTCCATATATTT
TGCTCATGCGAATCTGTCGCCGATGTTATGAATCTTGCAATGACTTGCCG
GCGACTTCATACCGTCTTCCACCGGTCCAATAAACTACAAATTCTCGTTG
ATGTTGCGGAGTCTGAGTTGGGCCCTTTGGATGATATCATCCAGATCGTC
ACGCAGAATACCAGCCAACGTGCCCACCTCTTTCGTACCGCCCCTATAAC
CGACTCCCTCCTTAAACAAATAGTCCAGATCGGGCACGTGGCCCAGAAGT
GGGAAATCATATATCCGGTCAAGAAATGGAAGACCGATTATGAGAATCGT
CGCTCGCTGGATGACGATGAGCGGTTCCGTCTCCGCCGTGCAATATATCG
TCTTTGGCTGTACCACCGGGCCTTTCACACGGAGACTTATAGTCGGTTTA
GCCGCCCCCTTCCACATATCGTTTCCGAGCGTGCCCAACTCTTGCACAAC
TGGTCCACAGCCGAGCTGGCCGAGATTGAGGATGTGCGTTTGATCATCGG
TGATATTGTGCAGAACCACATTTGTCCAAGCAACGGGACTATCCAACGCA
AATTCCGCAAACGCTACCCGGAAAGTAACCATCAACTGACCTTCAATATC
CATTTAAATTACCCTTCGAGCAGTAGTCCCGCTGGTGCACCTAGTCTGTT
TGAGAAGGATCTCAATCCAGCCGAGCAGTATTTCCACACCGCGCACCCTA
GCAACTTCACTGAATCACCCGCCAAATATAAGTCACGGTTTCGGAACGAT
TACTTTCATGACCCTGGTTCTGAAGGATGGGGTGACGAGATCCCACATTA
TTATGTCGTGCAGGACATGCTGAAACTCGATCCGGGCCAGGTGATCTGGC
TACGGGAGCATGCACCTCTTAAAGAACAGGTGGAGACTTATGTACGCTCC
TTTGGGGACTGGTTCCGCGACAATGGCGAGACCTTTGGCGATACATTGGA
GTGGGTGATGAAGGAGCGGGGTGATGATATCGATGAGTTTCGAGCTGCTA
TTGCAGAACGGGAGGTTGGCGTGGTGTGGGATTGATTCGATGGAATTGTG
TATGTTTGCTGTCATATTGCGTAGCATATCGATTACTGTAGGAAAGCATG
TTAGTGTTACATAGTTAATGTGAGAGAACTATCAACTGTGCAATGGGAAC
ATTACCTTTTCCCTTGTGTGACCACCAAGCACCTTGGACT
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Coding sequence (CDS) from alignment at ch7:2981114..2982753+

>KJC3_010306-T1 ID=KJC3_010306-T1|Name=KJC3_010306-T1|organism=Aspergillus niger KJC3|type=CDS|length=1080bp|location=Sequence derived from alignment at ch7:2981114..2982753+ (Aspergillus niger KJC3)
ATGCCCTTCCATCAATTGGCCACGGAGCTATTGCTCCATATATTTTGCTC
ATGCGAATCTGTCGCCGATGTTATGAATCTTGCAATGACTTGCCGGCGAC
TTCATACCGTCTTCCACCGGTCCAATAAACTACAAATTCTCGTTGATGTT
GCGGAGTCTGAGTTGGGCCCTTTGGATGATATCATCCAGATCGTCACGCA
GAATACCAGCCAACGTGCCCACCTCTTTCGTACCGCCCCTATAACCGACT
CCCTCCTTAAACAAATAGTCCAGATCGGGCACGTGGCCCAGAAGTGGGAA
ATCATATATCCGGTCAAGAAATGGAAGACCGATTATGAGAATCGTCGCTC
GCTGGATGACGATGAGCGGTTCCGTCTCCGCCGTGCAATATATCGTCTTT
GGCTGTACCACCGGGCCTTTCACACGGAGACTTATAGTCGGTTTAGCCGC
CCCCTTCCACATATCGTTTCCGAGCGTGCCCAACTCTTGCACAACTGGTC
CACAGCCGAGCTGGCCGAGATTGAGGATGTGCGTTTGATCATCGGTGATA
TTGTGCAGAACCACATTTGTCCAAGCAACGGGACTATCCAACGCAAATTC
CGCAAACGCTACCCGGAAAGTAACCATCAACTGACCTTCAATATCCATTT
AAATTACCCTTCGAGCAGTAGTCCCGCTGGTGCACCTAGTCTGTTTGAGA
AGGATCTCAATCCAGCCGAGCAGTATTTCCACACCGCGCACCCTAGCAAC
TTCACTGAATCACCCGCCAAATATAAGTCACGGTTTCGGAACGATTACTT
TCATGACCCTGGTTCTGAAGGATGGGGTGACGAGATCCCACATTATTATG
TCGTGCAGGACATGCTGAAACTCGATCCGGGCCAGGTGATCTGGCTACGG
GAGCATGCACCTCTTAAAGAACAGGTGGAGACTTATGTACGCTCCTTTGG
GGACTGGTTCCGCGACAATGGCGAGACCTTTGGCGATACATTGGAGTGGG
TGATGAAGGAGCGGGGTGATGATATCGATGAGTTTCGAGCTGCTATTGCA
GAACGGGAGGTTGGCGTGGTGTGGGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_010306KJC3_010306Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010306-T1KJC3_010306-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010306-T1.utr5p1KJC3_010306-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_010306-T1.utr5p2KJC3_010306-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010306-T1.exon1KJC3_010306-T1.exon1Aspergillus niger KJC3exon
KJC3_010306-T1.exon2KJC3_010306-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010306-T1.cdsKJC3_010306-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010306-T1.utr3p1KJC3_010306-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
DBxrefInterPro:IPR036047
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2981114..2982753 +
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