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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3023987..3025135+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010320-T1 ID=KJC3_010320-T1|Name=KJC3_010320-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1149bp|location=Sequence derived from alignment at ch7:3023987..3025135+ (Aspergillus niger KJC3)
CATAAAGATCTGACTACTCCCCGGCCCAAAGGAAAGAAGCAATGTGTTTC
AACCTGGAACCAAGCCATTGGCGCTACAGCCACCACTCACCACTGCATTG
TCCAGTCTGACAATTGCTGACTGACTGAGATCCATTTATACAATCTGCAA
CCCCGTCATGAGAAATACTTATATCCTCCCACATACCATAAACTTTCTAT
ACTCACATAACATATGAAATCATCATCATGCTCCATCGTACTAGTGTCTC
GAGGATAGTACCACCAACCCAGATCTTCTCCATCACCACCACACTCATAA
TCCTCCTAAGCGCCCTCACCCTCACCACAGCCCAACAACCAAAATCAACC
GTAATAATCACCATAATAGCACCACCAACCACCACCCAACAACCCCCATC
TTACACCTCCCCGGCGCTCTTTCAATCCTCCATCCTAGACGTCAGCAACA
CCTACCGCAAAGCTCACAACGCAAGCAACCTAATCTGGAACACGACGTTG
ACTCAGTACGCTCTCGATTGGGCACAGGGTTGTAAATGGCAGCATTCGGT
ATACCCTTCCCCTCCCTTTCCCCCAAGATATGAATACACTGGAACGAAAA
ATAGCTAATAAGTAATGTACAGAACGGCCCCTACGGCGAGAACCTCGCCT
TCGGGTACCCCAACGTCTCGTCTGCCGTAGCCGCCTGGGGTGACGAAGTC
CAAAAGTACAATTTCCAGGAACCGACGGGGTTCACGGAGGAGACGGGACA
TTTTACGCAGTTGGTGTGGAGGGAGACGAGGGAGGTGGGGTGTGCGGCTA
TTGATTGTGGATATAACAATACTAACACTACTAATGATAATGATAATGGG
AATGGGAAGAGAAGTGATGGTGGAGGCGGAGGAGGTGGTGGGATAAATGG
AACGGAGAGACCGCAGGGATGGTATGTCGTTTGTGAATACTCGCCTAGGG
GCAATATCATTGGGGGCAATAAGAAATTGGGGGATAAGGAGTTCTTTAAG
ATTAACGTGCAGCCGTCGAGTACTTATTCCGGGCCGTATAATACGGGATC
GGCTGGAAATGGGGCCGCGAGGGTGGAATGTATAATGGGATTATGGTGGG
TTGTGTTGGGGTGGTGGTTGGTGTTGCTGACTTTTGGATAGTTTGGTAA back to topCoding sequence (CDS) from alignment at ch7:3023987..3025135+ >KJC3_010320-T1 ID=KJC3_010320-T1|Name=KJC3_010320-T1|organism=Aspergillus niger KJC3|type=CDS|length=2358bp|location=Sequence derived from alignment at ch7:3023987..3025135+ (Aspergillus niger KJC3)
ATGCTCCATCGTACTAGTGTCTCGAGGATAGTACCACCAACCCAGATCTT
CTCCATCACCACCACACTCATAATCCTCCTAAGCGCCCTCACCCTCACCA
CAGCCCAACAACCAAAATCAACCGTAATAATCACCATAATAGCACCACCA
ACCACCACCCAACAACCCCCATCTTACACCTCCCCGGCGCTCTTTCAATC
CTCCATCCTAGACGTCAGCAACACCTACCGCAAAGCTCACAACGCAAGCA
ACCTAATCTGGAACACGACGTTGACTCAGTACGCTCTCGATTGGGCACAG
GGTTGTAAATGGCAGCATTCGAACGGCCCCTACGGCGAGAACCTCGCCTT
CGGGTACCCCAACGTCTCGTCTGCCGTAGCCGCCTGGGGTGACGAAGTCC
AAAAGTACAATTTCCAGGAACCGACGGGGTTCACGGAGGAGACGGGACAT
TTTACGCAGTTGGTGTGGAGGGAGACGAGGGAGGTGGGGTGTGCGGCTAT
TGATTGTGGATATAACAATACTAACACTACTAATGATAATGATAATGGGA
ATGGGAAGAGAAGTGATGGTGGAGGCGGAGGAGGTGGTGGGATAAATGGA
ACGGAGAGACCGCAGGGATGGTATGTCGTTTGTGAATACTCGCCTAGGGG
CAATATCATTGGGGGCAATAAGAAATTGGGGGATAAGGAGTTCTTTAAGA
TTAACGTGCAGCCGTCGAGTACTTATTCCGGGCCGTATAATACGGGATCG
GCTGGAAATGGGGCCGCGAGGGTGGAATTTTGGTAAATGCTCCATCGTAC
TAGTGTCTCGAGGATAGTACCACCAACCCAGATCTTCTCCATCACCACCA
CACTCATAATCCTCCTAAGCGCCCTCACCCTCACCACAGCCCAACAACCA
AAATCAACCGTAATAATCACCATAATAGCACCACCAACCACCACCCAACA
ACCCCCATCTTACACCTCCCCGGCGCTCTTTCAATCCTCCATCCTAGACG
TCAGCAACACCTACCGCAAAGCTCACAACGCAAGCAACCTAATCTGGAAC
ACGACGTTGACTCAGTACGCTCTCGATTGGGCACAGGGTTGTAAATGGCA
GCATTCGAACGGCCCCTACGGCGAGAACCTCGCCTTCGGGTACCCCAACG
TCTCGTCTGCCGTAGCCGCCTGGGGTGACGAAGTCCAAAAGTACAATTTC
CAGGAACCGACGGGGTTCACGGAGGAGACGGGACATTTTACGCAGTTGGT
GTGGAGGGAGACGAGGGAGGTGGGGTGTGCGGCTATTGATTGTGGATATA
ACAATACTAACACTACTAATGATAATGATAATGGGAATGGGAAGAGAAGT
GATGGTGGAGGCGGAGGAGGTGGTGGGATAAATGGAACGGAGAGACCGCA
GGGATGGTATGTCGTTTGTGAATACTCGCCTAGGGGCAATATCATTGGGG
GCAATAAGAAATTGGGGGATAAGGAGTTCTTTAAGATTAACGTGCAGCCG
TCGAGTACTTATTCCGGGCCGTATAATACGGGATCGGCTGGAAATGGGGC
CGCGAGGGTGGAATTTTGGTAAATGCTCCATCGTACTAGTGTCTCGAGGA
TAGTACCACCAACCCAGATCTTCTCCATCACCACCACACTCATAATCCTC
CTAAGCGCCCTCACCCTCACCACAGCCCAACAACCAAAATCAACCGTAAT
AATCACCATAATAGCACCACCAACCACCACCCAACAACCCCCATCTTACA
CCTCCCCGGCGCTCTTTCAATCCTCCATCCTAGACGTCAGCAACACCTAC
CGCAAAGCTCACAACGCAAGCAACCTAATCTGGAACACGACGTTGACTCA
GTACGCTCTCGATTGGGCACAGGGTTGTAAATGGCAGCATTCGAACGGCC
CCTACGGCGAGAACCTCGCCTTCGGGTACCCCAACGTCTCGTCTGCCGTA
GCCGCCTGGGGTGACGAAGTCCAAAAGTACAATTTCCAGGAACCGACGGG
GTTCACGGAGGAGACGGGACATTTTACGCAGTTGGTGTGGAGGGAGACGA
GGGAGGTGGGGTGTGCGGCTATTGATTGTGGATATAACAATACTAACACT
ACTAATGATAATGATAATGGGAATGGGAAGAGAAGTGATGGTGGAGGCGG
AGGAGGTGGTGGGATAAATGGAACGGAGAGACCGCAGGGATGGTATGTCG
TTTGTGAATACTCGCCTAGGGGCAATATCATTGGGGGCAATAAGAAATTG
GGGGATAAGGAGTTCTTTAAGATTAACGTGCAGCCGTCGAGTACTTATTC
CGGGCCGTATAATACGGGATCGGCTGGAAATGGGGCCGCGAGGGTGGAAT
TTTGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010320-T1.utr5p1 | KJC3_010320-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-35) |
| DBxref | InterPro:IPR034120 |
| DBxref | InterPro:IPR018244 |
| DBxref | InterPro:IPR035940 |
| DBxref | InterPro:IPR014044 |
| DBxref | InterPro:IPR001283 |
| DBxref | PFAM:PF00188 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3023987..3025135 + |
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